Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-115f13.1

Gene Name Gene ID Reads Annotation
si:ch73-115f13.1 si:ch73-115f13.1 15










Genes with expression patterns similar to si:ch73-115f13.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-115f13.1 si:ch73-115f13.1 15 7 1.000 1.000 1.000 1.000 1.000 - 1.000 - 1.000
2. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 2.644 1.000 - - 0.823 0.821 - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
3. si:dkey-102c8.1 si:dkey-102c8.1 85 2.463 0.835 0.890 0.738 - - - - - -
4. serpinb1l2 ENSDARG00000070396 37 2 - 1.000 - - - - 1.000 - - serpin peptidase inhibitor, clade B (ovalbumin), member 1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041001-117]
5. lmx1a ENSDARG00000020354 111 2 1.000 - - - - - 1.000 - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
6. si:ch211-117m20.4 ENSDARG00000094286 7 2 1.000 1.000 - - - - - - - si:ch211-117m20.4 [Source:ZFIN;Acc:ZDB-GENE-060526-20]
7. si:ch73-44m9.1 ENSDARG00000077115 3 2 1.000 1.000 - - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
8. CLDND1_1 CLDND1_1 50 2 - 1.000 - - - - 1.000 - -
9. AL929453.1 ENSDARG00000115950 31 2 1.000 1.000 - - - - - - -
10. crispld1a ENSDARG00000077275 7 2 1.000 - - - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
11. si:ch211-218d20.10 si:ch211-218d20.10 4 2 1.000 - - - 1.000 - - - -
12. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 2 - 1.000 - - 1.000 - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
13. ADTRP ADTRP 2 1.996 - 1.000 - 0.996 - - - - -
14. CNGA1 3 1.996 - - - 0.996 1.000 - - - - cyclic nucleotide gated channel alpha 1
15. oxgr1a.1 ENSDARG00000033684 24 1.996 - 1.000 - 0.996 - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
16. BX682552.2_1 BX682552.2_1 37 1.994 - 1.000 - - - - 0.994 - -
17. CSF3 CSF3 4 1.974 - - - 0.974 - - 1.000 - -
18. si:ch211-286b5.2 ENSDARG00000096514 6 1.958 - - - 0.958 1.000 - - - - si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
19. si:ch73-6k14.2 ENSDARG00000096031 16 1.953 - - - 0.996 - - 0.957 - - si:ch73-6k14.2 [Source:ZFIN;Acc:ZDB-GENE-110914-243]
20. si:ch73-381a20.2 si:ch73-381a20.2 11 1.952 - 1.000 - - - - 0.952 - -
21. slc8a2a ENSDARG00000008912, ENSDARG00000116797 12 1.908 - 1.000 - - - - 0.908 - - solute carrier family 8 (sodium/calcium exchanger), member 2a [Source:ZFIN;Acc:ZDB-GENE-060531-155]
22. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.908 - 1.000 - - - - 0.908 - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
23. si:ch211-229i14.2 ENSDARG00000086048 19 1.903 0.903 1.000 - - - - - - - si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
24. si:dkey-167k11.1 si:dkey-167k11.1 14 1.879 - - - 0.879 1.000 - - - -
25. bgna ENSDARG00000017884 9 1.868 - 1.000 0.868 - - - - - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
26. FASN ENSDARG00000087657 18 1.867 - 1.000 0.867 - - - - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
27. si:dkeyp-107f9.4 ENSDARG00000104468 11 1.864 1.000 - 0.864 - - - - - - si:dkeyp-107f9.4 [Source:ZFIN;Acc:ZDB-GENE-120709-91]
28. kcnip3b ENSDARG00000017880, ENSDARG00000109763 105 1.821 0.928 - - - - - 0.893 - - Kv channel interacting protein 3b, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1752]
29. CDHR2_1 CDHR2_1 12 1.812 - - 0.812 - - - 1.000 - -
30. zgc:77938 ENSDARG00000088366 74 1.808 1.000 0.808 - - - - - - - zgc:77938 [Source:ZFIN;Acc:ZDB-GENE-040426-1910]
31. olfml2bb ENSDARG00000021480 256 1.806 - 1.000 - - 0.806 - - - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
32. cx52.9 ENSDARG00000086453 7 1.805 - - - - 1.000 - - - 0.805 connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
33. zgc:171544 zgc:171544 11 1.797 - 1.000 - - 0.797 - - - -
34. sumo2a ENSDARG00000104390 4 1.797 - 1.000 - - 0.797 - - - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
35. si:dkey-258p11.3 si:dkey-258p11.3 9 1.788 - 0.788 - - - - 1.000 - -
36. dnaaf1 ENSDARG00000012030 58 1.784 - - 0.868 - - - 0.916 - - dynein, axonemal, assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-031114-4]
37. PBRM1 ENSDARG00000003877 225 1.764 0.764 1.000 - - - - - - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
38. si:ch211-145h19.1 31 1.764 0.764 1.000 - - - - - - - si:ch211-145h19.1
39. aftphb ENSDARG00000071347 161 1.758 - 1.000 0.758 - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
40. noxo1b ENSDARG00000056374 78 1.75 1.000 - 0.750 - - - - - - NADPH oxidase organizer 1b [Source:ZFIN;Acc:ZDB-GENE-101203-1]
41. zgc:174654 zgc:174654 54 1.716 - 0.808 - - - - 0.908 - -
42. si:dkey-25i10.5 si:dkey-25i10.5 18 1.715 0.715 1.000 - - - - - - -
43. si:ch211-59h6.1 ENSDARG00000013022 193 1.698 - 0.815 - 0.883 - - - - - si:ch211-59h6.1 [Source:ZFIN;Acc:ZDB-GENE-091204-418]
44. CACNG4 CACNG4 123 1.687 0.964 - - - - - 0.723 - -
45. fam83fb ENSDARG00000104188 79 1.686 - - 0.829 - - - 0.857 - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
46. scg5 ENSDARG00000032126, ENSDARG00000077045 29 1.682 0.820 - 0.862 - - - - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
47. ccdc65 ENSDARG00000032005, ENSDARG00000115576 5 1.667 - 0.788 - 0.879 - - - - - coiled-coil domain containing 65 [Source:ZFIN;Acc:ZDB-GENE-030616-358]
48. odf3b ENSDARG00000114397, ENSDARG00000116899 21 1.657 - 0.808 - - - - 0.849 - - outer dense fiber of sperm tails 3B [Source:ZFIN;Acc:ZDB-GENE-030131-7464]
49. fam5ca fam5ca 76 1.652 - 0.829 - - - - 0.823 - -
50. si:ch211-10m5.3 si:ch211-10m5.3 10 1.631 0.715 - - - - - 0.916 - -
51. MYCT1 MYCT1 64 1.62 - - 0.800 - - - 0.820 - -
52. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 1.584 - 0.788 - - - - 0.796 - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
53. CU693366.1 CU693366.1 186 1.579 - 0.815 - - - - 0.764 - -
54. pus3 ENSDARG00000028976 52 1.578 - 0.802 - - - - 0.776 - - pseudouridylate synthase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9433]
55. gpr63 ENSDARG00000074540 242 1.567 - 0.748 - - - - 0.819 - - G protein-coupled receptor 63 [Source:ZFIN;Acc:ZDB-GENE-110411-183]
56. tapbp tapbp 70 1.552 0.764 0.788 - - - - - - -
57. tnxb 30 1.534 - - - 0.730 - - - - 0.804 tenascin XB
58. trip4 ENSDARG00000098074 79 1.525 - 0.808 - - - - 0.717 - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
59. snx18b ENSDARG00000044246, ENSDARG00000110012 51 1.524 - - - 0.730 - - 0.794 - - sorting nexin 18b [Source:ZFIN;Acc:ZDB-GENE-080213-6]
60. si:dkey-68l7.1 si:dkey-68l7.1 159 1.52 - 0.735 - - - - 0.785 - -
61. MYRFL ENSDARG00000101645 15 1.509 0.764 - - - - - 0.745 - - myelin regulatory factor like [Source:ZFIN;Acc:ZDB-GENE-180312-1]
62. P2RY11 ENSDARG00000014929 75 1 1.000 - - - - - - - - purinergic receptor P2Y11 [Source:ZFIN;Acc:ZDB-GENE-111221-4]
63. CR788231.1 CR788231.1 61 1 - - - - - - 1.000 - -
64. si:ch211-134d5.3 si:ch211-134d5.3 1 1 - 1.000 - - - - - - -
65. ROCK2 ROCK2 8 1 - 1.000 - - - - - - -
66. NACC2 160 1 - - - - - - 1.000 - - NACC family member 2
67. lhx6 ENSDARG00000006896, ENSDARG00000112520 98 1 - 1.000 - - - - - - - LIM homeobox 6 [Source:ZFIN;Acc:ZDB-GENE-041025-1]
68. creb5b ENSDARG00000070536 9 1 - 1.000 - - - - - - - cAMP responsive element binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-091020-6]
69. CABZ01067175.1 ENSDARG00000100401 0 1 - - - - 1.000 - - - - T-cell leukemia homeobox protein 3-like [Source:NCBI gene;Acc:100008066]
70. CR854923.1 CR854923.1 18 1 - 1.000 - - - - - - -
71. fam219b ENSDARG00000104637 3 1 - - - - 1.000 - - - - family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
72. CABZ01112215.1 CABZ01112215.1 23 1 - - - - - - 1.000 - -
73. aven ENSDARG00000002894 49 1 - - - - - - 1.000 - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
74. si:ch211-81g2.1 si:ch211-81g2.1 5 1 - - - - - - 1.000 - -
75. CR382372.1 ENSDARG00000096684 2 1 1.000 - - - - - - - - si:dkeyp-122d12.1 [Source:NCBI gene;Acc:101885973]
76. TMPRSS7 5 1 - 1.000 - - - - - - - transmembrane protease, serine 7
77. sycp2 ENSDARG00000088950 3 1 1.000 - - - - - - - - synaptonemal complex protein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-237]
78. si:dkey-57i11.4 si:dkey-57i11.4 0 1 - - - - 1.000 - - - -
79. drd4-rs ENSDARG00000001912 45 1 - 1.000 - - - - - - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
80. MPZL2 MPZL2 31 1 - 1.000 - - - - - - -
81. si:dkey-211g8.7 ENSDARG00000058535 5 1 - - - - - - 1.000 - - si:dkey-211g8.7 [Source:ZFIN;Acc:ZDB-GENE-060503-907]
82. CR628395.1 ENSDARG00000116298 75 1 - 1.000 - - - - - - -
83. GRIK3 ENSDARG00000077715 178 1 1.000 - - - - - - - - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
84. wnt5a ENSDARG00000104973 21 1 1.000 - - - - - - - - wingless-type MMTV integration site family, member 5a [Source:ZFIN;Acc:ZDB-GENE-060328-3]
85. iffo1a ENSDARG00000062976 5 1 - - - - 1.000 - - - - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
86. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - 1.000 - - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
87. cnn1b ENSDARG00000102398 40 1 - - - - 1.000 - - - - calponin 1, basic, smooth muscle, b [Source:ZFIN;Acc:ZDB-GENE-091118-54]
88. got1 ENSDARG00000039093 1 1 1.000 - - - - - - - - glutamic-oxaloacetic transaminase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-040426-2003]
89. PDE1C PDE1C 1 1 1.000 - - - - - - - -
90. hook2 ENSDARG00000039309, ENSDARG00000099235 0 1 - - - - 1.000 - - - - hook microtubule-tethering protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1636]
91. ZSWIM2 ENSDARG00000075700 8 1 - - - - 1.000 - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
92. wisp2 ENSDARG00000077882 3 1 - - - - 1.000 - - - - WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
93. si:dkey-16i5.8 ENSDARG00000096722 1 1 - 1.000 - - - - - - - si:dkey-16i5.8 [Source:ZFIN;Acc:ZDB-GENE-030131-1207]
94. fubp3 ENSDARG00000086896 21 1 1.000 - - - - - - - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
95. galca ENSDARG00000037064 12 1 - 1.000 - - - - - - - galactosylceramidase a [Source:ZFIN;Acc:ZDB-GENE-040724-243]
96. si:ch211-201p7.9 si:ch211-201p7.9 2 1 - - - - 1.000 - - - -
97. zgc:163077 ENSDARG00000101593 60 1 - 1.000 - - - - - - - zgc:163077 [Source:ZFIN;Acc:ZDB-GENE-070521-6]
98. si:dkey-46g23.5 ENSDARG00000008835 7 1 1.000 - - - - - - - - si:dkey-46g23.5 [Source:ZFIN;Acc:ZDB-GENE-030131-9306]
99. cox5aa_1 ENSDARG00000088383 3 1 1.000 - - - - - - - - cytochrome c oxidase subunit 5Aa [Source:ZFIN;Acc:ZDB-GENE-050522-133]
100. si:dkey-228d14.8 si:dkey-228d14.8 3 1 - - - - - - 1.000 - -

There are 1311 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA