Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch73-110p20.1

Gene Name Gene ID Reads Annotation
si:ch73-110p20.1 5932 si:ch73-110p20.1










Genes with expression patterns similar to si:ch73-110p20.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-110p20.1 5932 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch73-110p20.1
2. lsm12b ENSDARG00000109510 14459 2.447 - - 0.713 - - - 0.983 0.751 - LSM12 homolog b [Source:ZFIN;Acc:ZDB-GENE-040426-2164]
3. SH3BGRL ENSDARG00000058302 4525 1.981 - - - 0.985 - - 0.996 - - SH3 domain binding glutamate-rich protein like [Source:ZFIN;Acc:ZDB-GENE-040426-1376]
4. zgc:77849 ENSDARG00000012458, ENSDARG00000116615 21205 1.971 - 0.975 - - - - 0.996 - - zgc:77849 [Source:ZFIN;Acc:ZDB-GENE-030131-1107]
5. mapre1b ENSDARG00000002659 9119 1.966 - - - 0.970 - - 0.996 - - microtubule-associated protein, RP/EB family, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2256]
6. eif3ha ENSDARG00000102452 9238 1.959 - 0.974 - 0.985 - - - - - eukaryotic translation initiation factor 3, subunit H, a [Source:ZFIN;Acc:ZDB-GENE-040808-19]
7. azin1b ENSDARG00000035869, ENSDARG00000115647 9761 1.938 - - - 0.980 - - 0.958 - - antizyme inhibitor 1b [Source:ZFIN;Acc:ZDB-GENE-030121-1]
8. sub1a ENSDARG00000053446 13383 1.936 - - - 0.943 - - 0.993 - - SUB1 homolog, transcriptional regulator a [Source:ZFIN;Acc:ZDB-GENE-050522-151]
9. bnip4 ENSDARG00000022832, ENSDARG00000117207 3100 1.922 - - - 0.994 - - - 0.928 - BCL2 interacting protein 4 [Source:ZFIN;Acc:ZDB-GENE-051113-212]
10. arhgdig ENSDARG00000004034 10368 1.912 - - - 0.985 - - - 0.927 - Rho GDP dissociation inhibitor (GDI) gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1493]
11. zranb2 ENSDARG00000044332 6723 1.9 - - 0.903 - - - 0.997 - - zinc finger, RAN-binding domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2743]
12. fbl ENSDARG00000053912 5891 1.899 - - 0.902 - - - 0.997 - - fibrillarin [Source:ZFIN;Acc:ZDB-GENE-040426-1936]
13. smox ENSDARG00000036967 3816 1.897 - 0.985 - - - - - 0.912 - spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
14. ppa1b ENSDARG00000030441 9027 1.896 - - - - - - 0.997 - 0.899 pyrophosphatase (inorganic) 1b [Source:ZFIN;Acc:ZDB-GENE-050417-375]
15. ezrb ENSDARG00000025091 2861 1.878 - 0.972 - - - - - 0.906 - ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
16. rapgef2 ENSDARG00000005482 2586 1.871 - 0.985 0.886 - - - - - - Rap guanine nucleotide exchange factor (GEF) 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6959]
17. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 1.867 - 0.952 - - - - - 0.915 - coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
18. ncoa4 ENSDARG00000021439 4581 1.867 - - 0.873 0.994 - - - - - nuclear receptor coactivator 4 [Source:ZFIN;Acc:ZDB-GENE-040426-689]
19. ip6k2 ip6k2 3926 1.861 - - 0.869 0.992 - - - - -
20. pdcd4a ENSDARG00000021702 7293 1.851 - - - 0.982 - - - 0.869 - programmed cell death 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1920]
21. fbxo28 ENSDARG00000027159 9602 1.846 - 0.959 - - - - - 0.887 - F-box protein 28 [Source:ZFIN;Acc:ZDB-GENE-030131-4665]
22. h1fx ENSDARG00000054058 4075 1.84 - - - - - - 0.996 0.844 - H1 histone family, member X [Source:ZFIN;Acc:ZDB-GENE-030131-1228]
23. cks1b ENSDARG00000007971 2739 1.827 - 0.984 0.843 - - - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
24. piezo1 ENSDARG00000076870 4704 1.824 - - - 0.989 - - - 0.835 - piezo-type mechanosensitive ion channel component 1 [Source:ZFIN;Acc:ZDB-GENE-041111-255]
25. reep5 ENSDARG00000100742 1470 1.792 - - 0.881 - - - - 0.911 - receptor accessory protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-9181]
26. CPEB4 CPEB4 3249 1.788 - 0.970 0.818 - - - - - -
27. elmo1 ENSDARG00000098753 6966 1.774 - - - - - - 0.997 - 0.777 engulfment and cell motility 1 (ced-12 homolog, C. elegans) [Source:ZFIN;Acc:ZDB-GENE-040426-2069]
28. lmnb1 ENSDARG00000044299 9817 1.767 - - 0.797 0.970 - - - - - lamin B1 [Source:ZFIN;Acc:ZDB-GENE-020424-2]
29. plcd1b ENSDARG00000034080 4074 1.758 - - 0.818 - - - - 0.940 - phospholipase C, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9435]
30. ndufb8 ENSDARG00000010113 11385 1.755 - - - - - 0.766 0.989 - - NADH:ubiquinone oxidoreductase subunit B8 [Source:ZFIN;Acc:ZDB-GENE-040426-1858]
31. atp6v0d1 ENSDARG00000069090, ENSDARG00000115876 4797 1.748 - - - - - - 0.994 - 0.754 ATPase H+ transporting V0 subunit d1 [Source:ZFIN;Acc:ZDB-GENE-030131-1531]
32. atf6 ENSDARG00000012656 3873 1.747 - 0.990 - - - - - - 0.757 activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]
33. eif1axb ENSDARG00000057912, ENSDARG00000111310 26395 1.747 - - - 0.829 - - 0.918 - - eukaryotic translation initiation factor 1A X-linked b [Source:ZFIN;Acc:ZDB-GENE-030131-1319]
34. atp1b3a ENSDARG00000015790 12310 1.742 - - - 0.990 - - - 0.752 - ATPase Na+/K+ transporting subunit beta 3a [Source:ZFIN;Acc:ZDB-GENE-990415-167]
35. ccdc22 ENSDARG00000052379 2276 1.741 - - - 0.993 - - - - 0.748 coiled-coil domain containing 22 [Source:ZFIN;Acc:ZDB-GENE-050913-93]
36. TNRC6C_1 TNRC6C_1 6574 1.74 - - 0.743 - - - 0.997 - -
37. atp2b4 5891 1.739 - 0.921 0.818 - - - - - - ATPase, Ca++ transporting, plasma membrane 4
38. psmb1 ENSDARG00000009640 8628 1.73 - - 0.821 - - - - 0.909 - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
39. acap3a ENSDARG00000075990 9652 1.721 - 0.981 - - - 0.740 - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1711]
40. TCIRG1 TCIRG1 875 1.721 - 0.976 - - - - - - 0.745
41. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 1.72 - - 0.727 0.993 - - - - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
42. adnp2b ENSDARG00000028431 4683 1.72 - - 0.876 - - - - 0.844 - ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
43. tmpoa ENSDARG00000007315 3638 1.719 - 0.984 - - - - - - 0.735 thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
44. cox6c ENSDARG00000038577 16845 1.716 - - - 0.918 - 0.798 - - - cytochrome c oxidase subunit 6C [Source:ZFIN;Acc:ZDB-GENE-040724-95]
45. frmd6 ENSDARG00000002332 2698 1.715 - - - - - - - 0.926 0.789 FERM domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-354]
46. TUBB8P7_1 TUBB8P7_1 2722 1.707 - - 0.837 - - - - - 0.870
47. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.702 - - - - - - 0.996 - 0.706 slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
48. nfil3-5 ENSDARG00000094965, ENSDARG00000113345 4657 1.698 - - - - - 0.701 0.997 - - nuclear factor, interleukin 3 regulated, member 5 [Source:ZFIN;Acc:ZDB-GENE-030131-7677]
49. ppp2r2d ENSDARG00000102009 5710 1.697 - - 0.808 - - - - - 0.889 protein phosphatase 2, regulatory subunit B, delta [Source:ZFIN;Acc:ZDB-GENE-040426-2086]
50. eif4a1b ENSDARG00000003032, ENSDARG00000116907 14301 1.697 - 0.970 - - - 0.727 - - - eukaryotic translation initiation factor 4A1B [Source:ZFIN;Acc:ZDB-GENE-040120-6]
51. si:dkey-126g1.9 ENSDARG00000093702 7832 1.696 - 0.726 - - - - 0.970 - - si:dkey-126g1.9 [Source:ZFIN;Acc:ZDB-GENE-030131-9862]
52. ywhah ENSDARG00000005560 11079 1.682 - 0.971 - - - - - - 0.711 tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta polypeptide [Source:ZFIN;Acc:ZDB-GENE-040426-2191]
53. sra1 ENSDARG00000053619 2799 1.681 - - - - - - - 0.854 0.827 steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
54. srsf6b ENSDARG00000016783 9926 1.68 - 0.971 - - - 0.709 - - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
55. srebf2 ENSDARG00000063438 1982 1.675 - - 0.886 - - - - - 0.789 sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
56. commd4 ENSDARG00000061946 3281 1.673 - - - - - - - 0.927 0.746 COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
57. tsc22d2 ENSDARG00000041839 1109 1.671 - 0.917 - - - - - - 0.754 TSC22 domain family 2 [Source:ZFIN;Acc:ZDB-GENE-031001-12]
58. acadvl ENSDARG00000016687 5329 1.655 - - 0.864 - - 0.791 - - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
59. zgc:85777 ENSDARG00000027009, ENSDARG00000112673 1499 1.649 - - - - - - - 0.903 0.746 zgc:85777 [Source:ZFIN;Acc:ZDB-GENE-040426-2210]
60. cyfip1 ENSDARG00000044345 5483 1.636 - - 0.926 - - - - - 0.710 cytoplasmic FMR1 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8557]
61. prmt1 ENSDARG00000010246 11311 1.631 - - - 0.895 - - - - 0.736 protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
62. nol10 ENSDARG00000020077 984 1.628 - - 0.875 - - - - - 0.753 nucleolar protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-764]
63. EEF1E1 ENSDARG00000071774 3806 1.611 - - 0.851 - - - - - 0.760 eukaryotic translation elongation factor 1 epsilon 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4949]
64. nap1l4b ENSDARG00000068868 3285 1.605 - - 0.876 - - - - - 0.729 nucleosome assembly protein 1-like 4b [Source:ZFIN;Acc:ZDB-GENE-041114-168]
65. tm9sf2 ENSDARG00000003866, ENSDARG00000115213 3888 1.597 - - 0.877 - - - - - 0.720 transmembrane 9 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6302]
66. ppib ENSDARG00000092798 21969 1.594 - - 0.772 0.822 - - - - - peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
67. BRK1 ENSDARG00000041974 6430 1.594 - - 0.844 - - - - - 0.750 BRICK1, SCAR/WAVE actin-nucleating complex subunit [Source:ZFIN;Acc:ZDB-GENE-040625-77]
68. zgc:100918 ENSDARG00000087243 5451 1.572 - - 0.746 - - - - - 0.826 zgc:100918 [Source:ZFIN;Acc:ZDB-GENE-040927-2]
69. boc ENSDARG00000074335 4832 1.569 - 0.826 - - - - - - 0.743 BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
70. mri1 ENSDARG00000075754 2567 1.563 - - 0.836 - - - - - 0.727 methylthioribose-1-phosphate isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-080204-109]
71. eprs ENSDARG00000060494 4729 1.561 - - 0.837 - - - - - 0.724 glutamyl-prolyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-030131-638]
72. tmed10 ENSDARG00000041391, ENSDARG00000110672 23599 1.553 - - 0.722 0.831 - - - - - transmembrane p24 trafficking protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4915]
73. ywhae1 ENSDARG00000006399, ENSDARG00000109636, ENSDARG00000109789 13364 1.551 - - - - - 0.741 0.810 - - tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, epsilon polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-779]
74. sec61b ENSDARG00000076568 11859 1.547 - - 0.720 0.827 - - - - - Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
75. snd1 ENSDARG00000006766 12906 1.545 - - - - - - - 0.823 0.722 staphylococcal nuclease and tudor domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3124]
76. anp32e ENSDARG00000054804 11017 1.487 - - 0.743 - - - - 0.744 - acidic (leucine-rich) nuclear phosphoprotein 32 family, member E [Source:ZFIN;Acc:ZDB-GENE-040426-2448]
77. hnrnpk ENSDARG00000018914 8841 1.45 - - 0.737 - - - - - 0.713 heterogeneous nuclear ribonucleoprotein K [Source:ZFIN;Acc:ZDB-GENE-040426-1926]
78. hoxb3a ENSDARG00000029263 5493 0.998 - - - - - - 0.998 - - homeobox B3a [Source:ZFIN;Acc:ZDB-GENE-990415-104]
79. mapk6 ENSDARG00000032103 6422 0.998 - - - - - - 0.998 - - mitogen-activated protein kinase 6 [Source:ZFIN;Acc:ZDB-GENE-050420-7]
80. fubp1 ENSDARG00000029248 15259 0.998 - - - - - - 0.998 - - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
81. timm13 ENSDARG00000058297 4447 0.997 - - - - - - 0.997 - - translocase of inner mitochondrial membrane 13 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040718-167]
82. fundc2 ENSDARG00000103740 3856 0.997 - - - - - - 0.997 - - fun14 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041010-26]
83. scg3 ENSDARG00000086288, ENSDARG00000115955 1587 0.997 - - - - - - 0.997 - - secretogranin III [Source:ZFIN;Acc:ZDB-GENE-040426-1725]
84. CAMK2G CAMK2G 3537 0.997 - - - - - - 0.997 - -
85. rcc2 ENSDARG00000011510, ENSDARG00000115981 7997 0.997 - - - - - - 0.997 - - regulator of chromosome condensation 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2213]
86. AP2A1 ENSDARG00000054320 5591 0.997 - - - - - - 0.997 - - adaptor related protein complex 2 subunit alpha 1 [Source:ZFIN;Acc:ZDB-GENE-090302-2]
87. meis1 meis1 6937 0.997 - - - - - - 0.997 - -
88. ZNF462 ENSDARG00000112909 1132 0.996 - - - - - - 0.996 - - zinc finger protein 462 [Source:HGNC Symbol;Acc:HGNC:21684]
89. gys1 ENSDARG00000016875 2037 0.996 - - - - - - 0.996 - - glycogen synthase 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1243]
90. mtmr14 ENSDARG00000059642 1405 0.996 - - - - - - 0.996 - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
91. kif5aa ENSDARG00000098936 2428 0.996 - - - - - - 0.996 - - kinesin family member 5A, a [Source:ZFIN;Acc:ZDB-GENE-070912-141]
92. rbms1a ENSDARG00000074023 2742 0.996 - - - - - - 0.996 - - RNA binding motif, single stranded interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4967]
93. snrnp27 ENSDARG00000035625 9080 0.996 - - - - - - 0.996 - - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
94. etv5a ENSDARG00000069763, ENSDARG00000112509, ENSDARG00000113729 1954 0.996 - - - - - - 0.996 - - ets variant 5a [Source:ZFIN;Acc:ZDB-GENE-030131-9572]
95. pfkma ENSDARG00000014179 1293 0.996 - - - - - - 0.996 - - phosphofructokinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-040912-135]
96. arf6b ENSDARG00000052928 4585 0.996 - - - - - - 0.996 - - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
97. cd276 ENSDARG00000003061 2798 0.996 - - - - - - 0.996 - - CD276 molecule [Source:ZFIN;Acc:ZDB-GENE-070112-452]
98. vamp2 ENSDARG00000056877 2158 0.996 - - - - - - 0.996 - - vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
99. irx3a ENSDARG00000101076 3106 0.996 - - - - - - 0.996 - - iroquois homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-991119-5]
100. galnt11 ENSDARG00000063636 1188 0.996 - - - - - - 0.996 - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 11 (GalNAc-T11) [Source:ZFIN;Acc:ZDB-GENE-060929-998]

There are 945 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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