Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch73-108h4.3

Gene Name Gene ID Reads Annotation
si:ch73-108h4.3 si:ch73-108h4.3 193










Genes with expression patterns similar to si:ch73-108h4.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch73-108h4.3 si:ch73-108h4.3 193 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. srrm2 ENSDARG00000037965 1967 1.928 - - - - - - 0.981 0.947 - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
3. rybpb ENSDARG00000053459 1464 1.865 - - - - - - 0.980 0.885 - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
4. si:dkey-82i20.5 ENSDARG00000116717 2965 1.821 - - - - - - 0.962 0.859 - si:dkey-82i20.5 [Source:ZFIN;Acc:ZDB-GENE-110914-101]
5. zgc:161969 ENSDARG00000041359 898 1.82 - - - - - - 0.987 0.833 - zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
6. dnajc9 ENSDARG00000031293, ENSDARG00000111989 4082 1.798 - - - - - - 0.980 0.818 - DnaJ (Hsp40) homolog, subfamily C, member 9 [Source:ZFIN;Acc:ZDB-GENE-040718-130]
7. AMDHD1 ENSDARG00000007366 89 1.795 - - - - - 0.798 0.997 - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
8. FAR2 FAR2 1459 1.793 - - - - - - 0.979 0.814 -
9. celsr1a ENSDARG00000069185 1894 1.783 - - - - - - 0.923 0.860 - cadherin EGF LAG seven-pass G-type receptor 1a [Source:ZFIN;Acc:ZDB-GENE-030616-78]
10. ttc1 ENSDARG00000044567 1141 1.781 - - - - - - 0.991 0.790 - tetratricopeptide repeat domain 1 [Source:ZFIN;Acc:ZDB-GENE-041114-80]
11. acbd3 ENSDARG00000042623 2643 1.769 - - - - - - 0.905 0.864 - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
12. lamb4 ENSDARG00000039133 1220 1.766 - - - - - - 0.955 0.811 - laminin, beta 4 [Source:ZFIN;Acc:ZDB-GENE-021226-2]
13. FGD5 FGD5 250 1.766 0.791 - - - - - - 0.975 -
14. TRIM67 ENSDARG00000108787 290 1.744 - 0.763 - - - - - 0.981 - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
15. etfa ENSDARG00000101631 2946 1.744 - - - - - - 0.902 0.842 - electron transfer flavoprotein subunit alpha [Source:ZFIN;Acc:ZDB-GENE-030131-4449]
16. rad9a ENSDARG00000056984, ENSDARG00000115514 152 1.708 - 0.728 - - - - - 0.980 - RAD9 checkpoint clamp component A [Source:ZFIN;Acc:ZDB-GENE-040426-935]
17. si:ch73-61d6.3 ENSDARG00000057826 274 1.705 0.733 - - - - - - 0.972 - si:ch73-61d6.3 [Source:ZFIN;Acc:ZDB-GENE-091204-109]
18. zgc:162612 ENSDARG00000079699 244 1.705 0.708 - - - - - 0.997 - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
19. wbscr22 wbscr22 644 1.69 - - - - - 0.716 0.974 - -
20. acsbg1 ENSDARG00000062077 2020 1.682 - - - - - 0.817 - 0.865 - acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
21. rorab ENSDARG00000001910, ENSDARG00000109324, ENSDARG00000113275 518 1.679 0.717 - - - - - - 0.962 - RAR-related orphan receptor A, paralog b [Source:ZFIN;Acc:ZDB-GENE-040426-855]
22. proc proc 1038 1.633 - - - - - - 0.774 0.859 -
23. CABZ01084613.1 CABZ01084613.1 22 1.595 0.817 - - - - 0.778 - - -
24. aars2 ENSDARG00000107385 190 1.587 - 0.867 - - - 0.720 - - - alanyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-213]
25. si:dkey-165n16.1 ENSDARG00000087048 283 1.586 - - 0.799 - - 0.787 - - - si:dkey-165n16.1 [Source:ZFIN;Acc:ZDB-GENE-100922-224]
26. pawr ENSDARG00000045486 1580 1.522 - - - - - - 0.819 0.703 - PRKC, apoptosis, WT1, regulator [Source:ZFIN;Acc:ZDB-GENE-041010-108]
27. si:dkey-261e22.5 si:dkey-261e22.5 68 1.487 - - 0.712 - - 0.775 - - -
28. mir92a-1 20 1.453 - - 0.716 - 0.737 - - - - microRNA 92a-1
29. anapc4 ENSDARG00000032237 385 1.444 - - - - - 0.726 - 0.718 - anaphase promoting complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-041212-10]
30. irx6a ENSDARG00000034420 29 1.442 0.714 0.728 - - - - - - - iroquois homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040712-5]
31. muc13a ENSDARG00000069559 985 1.417 0.712 - - - - 0.705 - - - mucin 13a, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-061207-26]
32. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 1 - - - - - - 1.000 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
33. PLXNB2 PLXNB2 99 0.999 - - - - - - 0.999 - -
34. SLITRK6 ENSDARG00000098769 217 0.999 - - - - - - 0.999 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
35. socs3a ENSDARG00000025428 349 0.999 - - - - - - 0.999 - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
36. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.999 - - - - - - 0.999 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
37. asb6 ENSDARG00000007125 389 0.999 - - - - - - 0.999 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
38. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.999 - - - - - - 0.999 - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
39. ICT1 356 0.999 - - - - - - 0.999 - - immature colon carcinoma transcript 1
40. baz2a ENSDARG00000102974 266 0.999 - - - - - - 0.999 - - bromodomain adjacent to zinc finger domain, 2A [Source:ZFIN;Acc:ZDB-GENE-041010-202]
41. zgc:173962 zgc:173962 67 0.999 - - - - - - 0.999 - -
42. PRR5 PRR5 630 0.999 - - - - - - 0.999 - -
43. ZNF337_10 ZNF337_10 183 0.999 - - - - - - 0.999 - -
44. dhodh ENSDARG00000051889 401 0.999 - - - - - - 0.999 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
45. BX324179.3 BX324179.3 326 0.999 - - - - - - 0.999 - -
46. lppr4a lppr4a 141 0.999 - - - - - - 0.999 - -
47. asb3 ENSDARG00000005246 317 0.998 - - - - - - 0.998 - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
48. zgc:63691 zgc:63691 180 0.998 - - - - - - 0.998 - -
49. VPS37C ENSDARG00000031836 906 0.998 - - - - - - 0.998 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
50. bin2b ENSDARG00000010255 2649 0.998 - - - - - - 0.998 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
51. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 0.998 - - - - - - 0.998 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
52. prdm5 ENSDARG00000006288 472 0.998 - - - - - - 0.998 - - PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]
53. plekhh1 ENSDARG00000053835 2123 0.998 - - - - - - 0.998 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
54. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.998 - - - - - - 0.998 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
55. dnajb9a ENSDARG00000052072 578 0.998 - - - - - - 0.998 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
56. sult3st1 ENSDARG00000009885 218 0.998 - - - - - - 0.998 - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
57. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.998 - - - - - - 0.998 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
58. si:ch211-51o18.2 si:ch211-51o18.2 111 0.998 - - - - - - 0.998 - -
59. znf687a ENSDARG00000102774 393 0.998 - - - - - - 0.998 - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
60. PRKD3 ENSDARG00000079967 192 0.998 - - - - - - 0.998 - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
61. PDZD8 ENSDARG00000088699 844 0.998 - - - - - - 0.998 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
62. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.998 - - - - - - 0.998 - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
63. PSD PSD 367 0.998 - - - - - - 0.998 - -
64. kbtbd7 ENSDARG00000078001 367 0.997 - - - - - - 0.997 - - kelch repeat and BTB (POZ) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-204]
65. zgc:136763 zgc:136763 190 0.997 - - - - - - 0.997 - -
66. esyt3 ENSDARG00000006422 335 0.997 - - - - - - 0.997 - - extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
67. igfbp3 ENSDARG00000099144 269 0.997 - - - - - - 0.997 - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
68. plxna4 ENSDARG00000019328 782 0.997 - - - - - - 0.997 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
69. irf8 ENSDARG00000056407 85 0.997 - - - - - - 0.997 - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
70. unk ENSDARG00000000935 353 0.997 - - - - - - 0.997 - - unkempt family zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-707]
71. zdhhc3 zdhhc3 152 0.997 - - - - - - 0.997 - -
72. ERRFI1 ERRFI1 664 0.997 - - - - - - 0.997 - -
73. illr4 ENSDARG00000008075 164 0.997 - - - - - - 0.997 - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
74. cul1b ENSDARG00000007691 719 0.997 - - - - - - 0.997 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
75. si:ch211-198d23.1 ENSDARG00000092574 104 0.996 - - - - - - 0.996 - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
76. armc1l ENSDARG00000020887 1219 0.996 - - - - - - 0.996 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
77. mob2b ENSDARG00000012005 395 0.996 - - - - - - 0.996 - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
78. FBXO31 ENSDARG00000062195 753 0.996 - - - - - - 0.996 - - F-box protein 31 [Source:ZFIN;Acc:ZDB-GENE-070628-4]
79. nhp2l1a nhp2l1a 993 0.996 - - - - - - 0.996 - -
80. acn9 acn9 520 0.996 - - - - - - 0.996 - -
81. agk ENSDARG00000009837, ENSDARG00000113514 811 0.996 - - - - - - 0.996 - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
82. cux1b ENSDARG00000043134 641 0.996 - - - - - - 0.996 - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
83. si:ch211-241o7.5 si:ch211-241o7.5 1387 0.996 - - - - - - 0.996 - -
84. nelfa ENSDARG00000061411, ENSDARG00000116904 581 0.995 - - - - - - 0.995 - - negative elongation factor complex member A [Source:ZFIN;Acc:ZDB-GENE-030131-6400]
85. rac3b ENSDARG00000020795 1523 0.995 - - - - - - 0.995 - - Rac family small GTPase 3b [Source:ZFIN;Acc:ZDB-GENE-080220-21]
86. COL13A1 1565 0.995 - - - - - - 0.995 - - collagen, type XIII, alpha 1, transcript variant X1
87. zdhhc5a ENSDARG00000016263 625 0.995 - - - - - - 0.995 - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
88. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.995 - - - - - - 0.995 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
89. mpdu1b ENSDARG00000040265 1968 0.995 - - - - - - 0.995 - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
90. gli1 ENSDARG00000101244 534 0.995 - - - - - - 0.995 - - GLI family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-030321-1]
91. dhdds ENSDARG00000039851 1135 0.995 - - - - - - 0.995 - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
92. prim1 ENSDARG00000040163 909 0.995 - - - - - - 0.995 - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
93. gbas gbas 735 0.995 - - - - - - 0.995 - -
94. tmco3 ENSDARG00000075108 368 0.995 - - - - - - 0.995 - - transmembrane and coiled-coil domains 3 [Source:ZFIN;Acc:ZDB-GENE-071030-1]
95. CU638740.1 CU638740.1 398 0.995 - - - - - - 0.995 - -
96. zgc:153372 ENSDARG00000068967 358 0.995 - - - - - - 0.995 - - zgc:153372 [Source:ZFIN;Acc:ZDB-GENE-060929-680]
97. PHYKPL ENSDARG00000040566 435 0.995 - - - - - - 0.995 - - 5-phosphohydroxy-L-lysine phospho-lyase [Source:ZFIN;Acc:ZDB-GENE-051127-33]
98. smc5 ENSDARG00000044282 779 0.995 - - - - - - 0.995 - - structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]
99. CAPN5 CAPN5 357 0.995 - - - - - - 0.995 - -
100. CABZ01068263.1 CABZ01068263.1 712 0.995 - - - - - - 0.995 - -

There are 1380 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA