Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-95j8.3

Gene Name Gene ID Reads Annotation
si:ch211-95j8.3 ENSDARG00000092580 20 si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]










Genes with expression patterns similar to si:ch211-95j8.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-95j8.3 ENSDARG00000092580 20 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-95j8.3 [Source:ZFIN;Acc:ZDB-GENE-091204-307]
2. C1S ENSDARG00000100599 20 1.876 - 0.876 - - - - - 1.000 - complement component 1, s subcomponent [Source:ZFIN;Acc:ZDB-GENE-030131-1232]
3. si:ch73-189n23.1 ENSDARG00000086247 15 1.87 - 0.870 - - - - - 1.000 - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
4. clcn1b ENSDARG00000012269 12 1.806 - - 0.960 - - - 0.846 - - chloride channel, voltage-sensitive 1b [Source:ZFIN;Acc:ZDB-GENE-100921-11]
5. FANCA ENSDARG00000098241 39 1.762 - 0.876 - - - 0.886 - - - FA complementation group A [Source:ZFIN;Acc:ZDB-GENE-060508-1]
6. epb41l3b ENSDARG00000019917 9 1.75 - - 0.750 - - - - 1.000 - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
7. foxn1 ENSDARG00000011879 22 1.726 - - - - - 0.943 0.783 - - forkhead box N1 [Source:ZFIN;Acc:ZDB-GENE-021008-1]
8. si:ch211-215m21.29 si:ch211-215m21.29 5 1.719 - 0.876 0.843 - - - - - -
9. sparcl1 ENSDARG00000074989 80 1.711 - - - - 0.825 0.886 - - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
10. LAYN LAYN 94 1.708 - - - - - 0.963 0.745 - -
11. FOLR1 FOLR1 25 1.677 - - 0.865 - - - - 0.812 -
12. bbs12 ENSDARG00000016112 38 1.666 - 0.870 - - - - 0.796 - - Bardet-Biedl syndrome 12 [Source:ZFIN;Acc:ZDB-GENE-070626-3]
13. rhoga ENSDARG00000068653 13 1.659 - - - - - 0.886 0.773 - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
14. znf106b ENSDARG00000091947 108 1.628 - - - - - 0.847 0.781 - - zinc finger protein 106b [Source:ZFIN;Acc:ZDB-GENE-091118-24]
15. CU896555.1 CU896555.1 27 1.622 - - 0.736 - - 0.886 - - -
16. ighv14-1 ENSDARG00000096418 17 1.613 - 0.770 - - - - 0.843 - - immunoglobulin heavy variable 14-1 [Source:ZFIN;Acc:ZDB-GENE-040514-42]
17. BEGAIN BEGAIN 39 1.592 - - 0.706 - - 0.886 - - -
18. si:dkey-32e6.3 ENSDARG00000092934 133 1.581 - 0.823 - - - - 0.758 - - si:dkey-32e6.3 [Source:ZFIN;Acc:ZDB-GENE-081104-408]
19. mfsd12b 8 1.58 - 0.790 0.790 - - - - - - major facilitator superfamily domain containing 12b
20. cx39.9 ENSDARG00000004082 148 1.573 - 0.827 - - - 0.746 - - - connexin 39.9 [Source:ZFIN;Acc:ZDB-GENE-040406-2]
21. slc34a2b ENSDARG00000036864 652 1.509 - 0.799 - - - - 0.710 - - solute carrier family 34 (type II sodium/phosphate cotransporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030709-1]
22. dis3 ENSDARG00000060559, ENSDARG00000110345 92 1.485 - 0.778 - - - - 0.707 - - DIS3 exosome endoribonuclease and 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-080213-3]
23. LARS2 ENSDARG00000075337 181 1.484 - 0.729 - - - - 0.755 - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
24. ankrd1a ENSDARG00000075263, ENSDARG00000110628, ENSDARG00000114111 252 1.482 - 0.742 - - - - 0.740 - - ankyrin repeat domain 1a (cardiac muscle) [Source:ZFIN;Acc:ZDB-GENE-100405-1]
25. si:dkey-165b20.3 ENSDARG00000099544 6 1 - - - - - - - 1.000 - si:dkey-165b20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-172]
26. VWA5A_1 VWA5A_1 6 1 - - - - - - - 1.000 -
27. CABZ01073380.1 CABZ01073380.1 5 1 - - - - - - - 1.000 -
28. BX548067.1 ENSDARG00000103045 0 1 - - - - - - - 1.000 - si:dkey-261o4.8 [Source:NCBI gene;Acc:100537246]
29. si:dkey-270b7.4 si:dkey-270b7.4 11 1 - - - - - - - 1.000 -
30. si:dkey-3p4.4 si:dkey-3p4.4 2 1 - - - - - - - 1.000 -
31. CR925813.2 CR925813.2 9 1 - - - - - - - 1.000 -
32. CU459094.2 ENSDARG00000113503 5 1 - - - - - - - 1.000 - uncharacterized LOC100331538 [Source:NCBI gene;Acc:100331538]
33. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - - - 1.000 - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
34. mir125b-3 0 1 - - - - - - - 1.000 - microRNA 125b-3
35. KRT18_1 KRT18_1 17 1 - - - - - - - 1.000 -
36. si:dkey-234l24.9 si:dkey-234l24.9 8 1 - - - - - - - 1.000 -
37. ca5 ca5 1 1 - - - - - - - 1.000 -
38. MAPKBP1 ENSDARG00000103746 4 1 - - - - - - - 1.000 - mitogen-activated protein kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-120207-1]
39. cacna1hb ENSDARG00000099708 1 1 - - - - - - - 1.000 - calcium channel, voltage-dependent, T type, alpha 1H subunit b [Source:ZFIN;Acc:ZDB-GENE-090312-128]
40. HMGXB3 ENSDARG00000077823 2 1 - - - - - - - 1.000 - HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
41. si:dkey-284g18.1 si:dkey-284g18.1 2 1 - - - - - - - 1.000 -
42. PITPNM3 ENSDARG00000055255 3 1 - - - - - - - 1.000 - PITPNM family member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9216]
43. mbd5 ENSDARG00000059581 1 1 - - - - - - - 1.000 - methyl-CpG binding domain protein 5 [Source:ZFIN;Acc:ZDB-GENE-070209-125]
44. phc2b ENSDARG00000013224 3 1 - - - - - - - 1.000 - polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
45. als2a ENSDARG00000075111 29 1 - - - - - - - 1.000 - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
46. ulk1a ENSDARG00000062518 10 1 - - - - - - - 1.000 - unc-51 like autophagy activating kinase 1a [Source:ZFIN;Acc:ZDB-GENE-080723-31]
47. zgc:194418 ENSDARG00000111790 1 1 - - - - - - - 1.000 - zgc:194418 [Source:ZFIN;Acc:ZDB-GENE-080723-5]
48. CABZ01071407.1 CABZ01071407.1 6 1 - - - - - - - 1.000 -
49. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - - 1.000 - monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
50. f7i ENSDARG00000075827 4 1 - - - - - - - 1.000 - coagulation factor VIIi [Source:ZFIN;Acc:ZDB-GENE-021206-10]
51. si:dkeyp-46h3.6 ENSDARG00000087363 14 1 - - - - - - - 1.000 - si:dkeyp-46h3.6 [Source:ZFIN;Acc:ZDB-GENE-060503-90]
52. MLXIPL ENSDARG00000089107, ENSDARG00000104054 5 1 - - - - - - - 1.000 - MLX interacting protein like [Source:ZFIN;Acc:ZDB-GENE-100922-66]
53. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - - - 1.000 - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
54. mrm1 ENSDARG00000059658 38 0.989 - - - - - 0.989 - - - mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060526-229]
55. glipr2 ENSDARG00000041724 41 0.984 - 0.984 - - - - - - - GLI pathogenesis-related 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4424]
56. crfb16 ENSDARG00000075181 40 0.982 - - 0.982 - - - - - - cytokine receptor family member B16 [Source:ZFIN;Acc:ZDB-GENE-071120-9]
57. si:ch211-202h22.7 ENSDARG00000073912 18 0.969 - - 0.969 - - - - - - si:ch211-202h22.7 [Source:ZFIN;Acc:ZDB-GENE-090313-77]
58. prmt3 ENSDARG00000019791 268 0.963 - - - - - 0.963 - - - protein arginine methyltransferase 3 [Source:ZFIN;Acc:ZDB-GENE-041105-1]
59. clcf1 ENSDARG00000076140 5 0.96 - - 0.960 - - - - - - cardiotrophin-like cytokine factor 1 [Source:ZFIN;Acc:ZDB-GENE-110411-244]
60. kcnc2 ENSDARG00000057468 12 0.96 - - 0.960 - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 2 [Source:ZFIN;Acc:ZDB-GENE-070410-118]
61. grm7p grm7p 225 0.96 - 0.960 - - - - - - -
62. si:dkey-115f9.2 si:dkey-115f9.2 18 0.96 - - 0.960 - - - - - -
63. si:ch211-199g17.8 si:ch211-199g17.8 9 0.96 - - 0.960 - - - - - -
64. smpdl3a ENSDARG00000053119 1 0.96 - - 0.960 - - - - - - sphingomyelin phosphodiesterase, acid-like 3A [Source:ZFIN;Acc:ZDB-GENE-050327-61]
65. GPR137B GPR137B 50 0.96 - - 0.960 - - - - - -
66. nr1h4 ENSDARG00000057741, ENSDARG00000113600 24 0.96 - - 0.960 - - - - - - nuclear receptor subfamily 1, group H, member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-313]
67. CR792453.1 ENSDARG00000095699 4 0.96 - - 0.960 - - - - - -
68. zswim6 ENSDARG00000101282 1 0.96 - - 0.960 - - - - - - zinc finger, SWIM-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-060602-4]
69. ankar ENSDARG00000000516 3 0.96 - - 0.960 - - - - - - ankyrin and armadillo repeat containing [Source:ZFIN;Acc:ZDB-GENE-030616-533]
70. tmem26b ENSDARG00000014682 2 0.96 - - 0.960 - - - - - - transmembrane protein 26b [Source:ZFIN;Acc:ZDB-GENE-080204-66]
71. sinup ENSDARG00000017163 5 0.96 - - 0.960 - - - - - - siaz-interacting nuclear protein [Source:ZFIN;Acc:ZDB-GENE-050913-2]
72. BX548078.2 BX548078.2 6 0.96 - - 0.960 - - - - - -
73. TDRD12 ENSDARG00000075217 3 0.96 - - 0.960 - - - - - - tudor domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-121214-348]
74. si:ch1073-75o15.4 ENSDARG00000094478 1 0.96 - - 0.960 - - - - - - si:ch1073-75o15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-199]
75. si:rp71-45g20.6 si:rp71-45g20.6 19 0.96 - - 0.960 - - - - - -
76. CU596012.1 CU596012.1 24 0.96 - - 0.960 - - - - - -
77. runx2a ENSDARG00000040261 1 0.96 - - 0.960 - - - - - - runt-related transcription factor 2a [Source:ZFIN;Acc:ZDB-GENE-040629-3]
78. fank1 ENSDARG00000039657 9 0.96 - - 0.960 - - - - - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
79. neu4 ENSDARG00000057677 1 0.96 - - 0.960 - - - - - - sialidase 4 [Source:ZFIN;Acc:ZDB-GENE-050522-125]
80. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 0.96 - - 0.960 - - - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
81. dfnb31b 1 0.96 - - 0.960 - - - - - - deafness, autosomal recessive 31b, transcript variant X2
82. samd7 ENSDARG00000060354 15 0.96 - - 0.960 - - - - - - sterile alpha motif domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-549]
83. slc25a15b ENSDARG00000062271, ENSDARG00000111891 75 0.959 - - 0.959 - - - - - - solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15b [Source:ZFIN;Acc:ZDB-GENE-060526-35]
84. BX247898.1 BX247898.1 75 0.957 - - - - - 0.957 - - -
85. CR753866.2 CR753866.2 6 0.952 - - 0.952 - - - - - -
86. piwil1 ENSDARG00000041699 21 0.948 - - - - 0.948 - - - - piwi-like RNA-mediated gene silencing 1 [Source:ZFIN;Acc:ZDB-GENE-030813-2]
87. lmbrd2a ENSDARG00000099566 15 0.948 - 0.948 - - - - - - - LMBR1 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-050417-32]
88. CU929354.1 CU929354.1 3 0.945 - - - - - - - 0.945 -
89. ZC3H7B 2 0.943 - - - - - 0.943 - - - zinc finger CCCH-type containing 7B
90. CABZ01046432.1 ENSDARG00000079325 11 0.943 - - - - - 0.943 - - - uncharacterized LOC100331045 [Source:NCBI gene;Acc:100331045]
91. ENSDARG00000088912 ENSDARG00000088912 8 0.943 - - - - - 0.943 - - -
92. SUSD1_1 SUSD1_1 83 0.941 - - - - - - 0.941 - -
93. taf4b ENSDARG00000075732 3 0.936 - - 0.936 - - - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
94. lhpp ENSDARG00000060196 34 0.936 - - 0.936 - - - - - - phospholysine phosphohistidine inorganic pyrophosphate phosphatase [Source:ZFIN;Acc:ZDB-GENE-070615-43]
95. si:ch211-207e19.16 si:ch211-207e19.16 3 0.936 - - 0.936 - - - - - -
96. adam19b ENSDARG00000067545 162 0.924 - 0.924 - - - - - - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
97. si:ch211-250k18.8_1 2 0.918 - - - - - - 0.918 - - si:ch211-250k18.8
98. mink1 ENSDARG00000035360, ENSDARG00000112785 13 0.918 - - 0.918 - - - - - - misshapen-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-060526-45]
99. si:rp71-78h1.10 si:rp71-78h1.10 104 0.918 - - - - - - 0.918 - -
100. esyt1b ENSDARG00000014239 8 0.918 - - - - - - 0.918 - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]

There are 781 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA