Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-93g21.3

Gene Name Gene ID Reads Annotation
si:ch211-93g21.3 si:ch211-93g21.3 1










Genes with expression patterns similar to si:ch211-93g21.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-93g21.3 si:ch211-93g21.3 1 2 - - - - 1.000 - 1.000 - -
2. crybb3 ENSDARG00000041301 48 1.616 - - - - 0.764 - 0.852 - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
3. flnb ENSDARG00000092281 10 1 - - - - - - 1.000 - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
4. GPRIN1 10 1 - - - - - - 1.000 - - G protein regulated inducer of neurite outgrowth 1
5. RECK ENSDARG00000090039 15 1 - - - - - - 1.000 - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
6. usp53b ENSDARG00000076499 16 1 - - - - - - 1.000 - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
7. SNORA30 SNORA30 1 1 - - - - 1.000 - - - -
8. KLHDC3 ENSDARG00000102772 14 1 - - - - - - 1.000 - - kelch domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2426]
9. setd1bb ENSDARG00000077244 34 1 - - - - - - 1.000 - - SET domain containing 1B, b [Source:ZFIN;Acc:ZDB-GENE-080522-1]
10. paplnb ENSDARG00000042186 18 1 - - - - - - 1.000 - - papilin b, proteoglycan-like sulfated glycoprotein [Source:ZFIN;Acc:ZDB-GENE-030131-6023]
11. si:dkey-21n8.3 si:dkey-21n8.3 5 1 - - - - - - 1.000 - -
12. KAZN_1 KAZN_1 13 1 - - - - - - 1.000 - -
13. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - 1.000 - - - -
14. alg13 ENSDARG00000054374 2 1 - - - - - - 1.000 - - ALG13, UDP-N-acetylglucosaminyltransferase subunit [Source:ZFIN;Acc:ZDB-GENE-060307-1]
15. CMTM8 CMTM8 71 1 - - - - - - 1.000 - -
16. gpr155a ENSDARG00000090804 27 1 - - - - - - 1.000 - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
17. GPR97_1 GPR97_1 2 1 - - - - - - 1.000 - -
18. snx33 ENSDARG00000014954 45 1 - - - - - - 1.000 - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
19. EGFR_1 EGFR_1 2 1 - - - - - - 1.000 - -
20. zgc:66432 zgc:66432 16 1 - - - - 1.000 - - - -
21. BX465203.2 BX465203.2 23 1 - - - - 1.000 - - - -
22. adrb1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - - - 1.000 - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
23. si:ch211-250n8.1 ENSDARG00000088736 4 1 - - - - - - 1.000 - - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
24. si:ch211-1f22.17 si:ch211-1f22.17 10 1 - - - - - - 1.000 - -
25. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - 1.000 - - - -
26. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - 1.000 - - - -
27. cyp2ad2 ENSDARG00000021172 2 1 - - - - 1.000 - - - - cytochrome P450, family 2, subfamily AD, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-020812-2]
28. BX572077.3 BX572077.3 20 1 - - - - - - 1.000 - -
29. cacng5a ENSDARG00000003326 17 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
30. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - - 1.000 - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
31. RNF224 RNF224 5 1 - - - - 1.000 - - - -
32. asb2a_1 asb2a_1 6 1 - - - - - - 1.000 - -
33. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 - - - - - - 1.000 - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
34. socs1a ENSDARG00000038095 20 1 - - - - - - 1.000 - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
35. CABZ01048021.1 CABZ01048021.1 15 1 - - - - - - 1.000 - -
36. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - - 1.000 - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
37. CT027682.3 CT027682.3 0 1 - - - - - - 1.000 - -
38. si:dkey-279j5.1 ENSDARG00000101459 17 1 - - - - - - 1.000 - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
39. FJX1 ENSDARG00000035873 22 1 - - - - - - 1.000 - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
40. ppapdc1a ppapdc1a 1 1 - - - - 1.000 - - - -
41. FRMPD1_2 FRMPD1_2 2 1 - - - - 1.000 - - - -
42. si:ch211-203l7.3 si:ch211-203l7.3 0 1 - - - - - - 1.000 - -
43. gpr75 ENSDARG00000098526 32 1 - - - - - - 1.000 - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
44. si:ch211-197g15.5 si:ch211-197g15.5 10 1 - - - - 1.000 - - - -
45. TMEM255B 1 1 - - - - 1.000 - - - - transmembrane protein 255B
46. WIPF1 WIPF1 32 1 - - - - - - 1.000 - -
47. XCR1 XCR1 9 1 - - - - - - 1.000 - -
48. HELZ2 ENSDARG00000012600 2 1 - - - - 1.000 - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
49. BX897747.3_1 BX897747.3_1 1 1 - - - - 1.000 - - - -
50. CU695006.1 CU695006.1 4 1 - - - - - - 1.000 - -
51. FMNL1 FMNL1 7 1 - - - - 1.000 - - - -
52. jak3 ENSDARG00000010252 11 1 - - - - 1.000 - - - - Janus kinase 3 (a protein tyrosine kinase, leukocyte) [Source:ZFIN;Acc:ZDB-GENE-070725-4]
53. ANKRD27 ENSDARG00000089207 3 1 - - - - 1.000 - - - - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
54. npnt ENSDARG00000018721 19 1 - - - - 1.000 - - - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
55. AL773596.2 AL773596.2 2 1 - - - - 1.000 - - - -
56. GLS2 GLS2 10 1 - - - - - - 1.000 - -
57. C4H12orf39 C4H12orf39 73 1 - - - - - - 1.000 - -
58. klhl24 klhl24 40 1 - - - - - - 1.000 - -
59. CT025887.1 ENSDARG00000114574 1 1 - - - - - - 1.000 - - uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
60. prpf3_1 ENSDARG00000086425, ENSDARG00000116776 84 1 - - - - - - 1.000 - - PRP3 pre-mRNA processing factor 3 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040823-3]
61. cyp1c2 ENSDARG00000101789 3 1 - - - - - - 1.000 - - cytochrome P450, family 1, subfamily C, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-050705-1]
62. kcnj1a.2 ENSDARG00000090866 8 1 - - - - - - 1.000 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
63. fam151a ENSDARG00000058218 40 1 - - - - - - 1.000 - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
64. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - - - 1.000 - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
65. tnni2a.1 ENSDARG00000045592 15 1 - - - - - - 1.000 - - troponin I type 2a (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-60]
66. UBAC2_1 UBAC2_1 23 1 - - - - - - 1.000 - -
67. myd88 ENSDARG00000010169 86 1 - - - - - - 1.000 - - myeloid differentiation primary response 88 [Source:ZFIN;Acc:ZDB-GENE-040219-3]
68. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - 1.000 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
69. atp2b1b ENSDARG00000007788 56 1 - - - - - - 1.000 - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
70. kcnab1 kcnab1 10 1 - - - - - - 1.000 - -
71. SLC9B1 SLC9B1 137 1 - - - - - - 1.000 - -
72. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - - - 1.000 - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
73. CU467646.3 ENSDARG00000099076 36 1 - - - - - - 1.000 - - mucin-2-like [Source:NCBI gene;Acc:108179180]
74. ENDOD1_2 ENDOD1_2 2 1 - - - - 1.000 - - - -
75. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - - - - 1.000 - -
76. si:dkey-1j5.4 ENSDARG00000073747 1 1 - - - - - - 1.000 - - si:dkey-1j5.4 [Source:ZFIN;Acc:ZDB-GENE-130603-91]
77. chrna9 ENSDARG00000054680 4 1 - - - - - - 1.000 - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
78. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - 1.000 - - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
79. npas4a ENSDARG00000055752 5 1 - - - - 1.000 - - - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
80. fstl3 ENSDARG00000025670 41 1 - - - - 1.000 - - - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
81. si:ch211-283e2.7 19 1 - - - - 1.000 - - - - si:ch211-283e2.7, transcript variant X2
82. SNORA26 SNORA26 1 1 - - - - - - 1.000 - -
83. GRM1 GRM1 4 1 - - - - - - 1.000 - -
84. APOH APOH 2 1 - - - - 1.000 - - - -
85. radil ENSDARG00000079779 14 1 - - - - - - 1.000 - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
86. zgc:154142 ENSDARG00000100792 42 1 - - - - - - 1.000 - - zgc:154142 [Source:ZFIN;Acc:ZDB-GENE-070615-2]
87. MFAP4_3 MFAP4_3 7 1 - - - - - - 1.000 - -
88. si:dkey-201i6.6 si:dkey-201i6.6 2 1 - - - - - - 1.000 - -
89. TXNRD2 TXNRD2 14 1 - - - - - - 1.000 - -
90. aste1 5 1 - - - - - - 1.000 - - asteroid homolog 1 (Drosophila)
91. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - - - 1.000 - - - -
92. bpnt1 ENSDARG00000043684 78 1 - - - - 1.000 - - - - bisphosphate nucleotidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-46]
93. he1b 11900 1 - - - - - - 1.000 - - hatching enzyme 1b
94. si:ch73-343l4.3 ENSDARG00000092502 1 1 - - - - 1.000 - - - - si:ch73-343l4.3 [Source:ZFIN;Acc:ZDB-GENE-090313-155]
95. pvalb5 ENSDARG00000032836 242 1 - - - - - - 1.000 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
96. lrrc38 lrrc38 20 1 - - - - - - 1.000 - -
97. akap1a ENSDARG00000089802 5 1 - - - - - - 1.000 - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
98. ZNF70_6 ZNF70_6 15 1 - - - - 1.000 - - - -
99. MFAP4_8 MFAP4_8 1 1 - - - - 1.000 - - - -
100. zgc:172014 ENSDARG00000101775 3 1 - - - - 1.000 - - - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]

There are 208 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA