Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-93g21.3

Gene Name Gene ID Reads Annotation
si:ch211-93g21.3 si:ch211-93g21.3 1










Genes with expression patterns similar to si:ch211-93g21.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-93g21.3 si:ch211-93g21.3 1 2 - - - - 1.000 - 1.000 - -
2. crybb3 ENSDARG00000041301 48 1.616 - - - - 0.764 - 0.852 - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
3. tnni2a.1 ENSDARG00000045592 15 1 - - - - - - 1.000 - - troponin I type 2a (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041114-60]
4. setd1bb ENSDARG00000077244 34 1 - - - - - - 1.000 - - SET domain containing 1B, b [Source:ZFIN;Acc:ZDB-GENE-080522-1]
5. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1 - - - - - - 1.000 - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
6. HELZ2 ENSDARG00000012600 2 1 - - - - 1.000 - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
7. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - - 1.000 - -
8. MFAP4_3 MFAP4_3 7 1 - - - - - - 1.000 - -
9. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - - - 1.000 - - - -
10. cyp2ad2 ENSDARG00000021172 2 1 - - - - 1.000 - - - - cytochrome P450, family 2, subfamily AD, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-020812-2]
11. KAZN_1 KAZN_1 13 1 - - - - - - 1.000 - -
12. chrna9 ENSDARG00000054680 4 1 - - - - - - 1.000 - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
13. npas4a ENSDARG00000055752 5 1 - - - - 1.000 - - - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
14. atm_1 ENSDARG00000002385 1 1 - - - - 1.000 - - - - ATM serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-040809-1]
15. RNH1_2 RNH1_2 12 1 - - - - - - 1.000 - -
16. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 - - - - - - 1.000 - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
17. zgc:194189 ENSDARG00000008010 26 1 - - - - - - 1.000 - - zgc:194189 [Source:ZFIN;Acc:ZDB-GENE-081022-71]
18. CU695006.1 CU695006.1 4 1 - - - - - - 1.000 - -
19. tusc3 ENSDARG00000078854 4 1 - - - - - - 1.000 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
20. asb2a_1 asb2a_1 6 1 - - - - - - 1.000 - -
21. BX572077.3 BX572077.3 20 1 - - - - - - 1.000 - -
22. si:dkey-61f9.2 2 1 - - - - 1.000 - - - - si:dkey-61f9.2
23. CT025887.1 ENSDARG00000114574 1 1 - - - - - - 1.000 - - uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
24. XCR1 XCR1 9 1 - - - - - - 1.000 - -
25. BX323819.1 BX323819.1 9 1 - - - - - - 1.000 - -
26. hs3st4 ENSDARG00000052648 6 1 - - - - 1.000 - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
27. GLS2 GLS2 10 1 - - - - - - 1.000 - -
28. CU855711.1 ENSDARG00000088643 6 1 - - - - 1.000 - - - - legumain-like [Source:NCBI gene;Acc:108191752]
29. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - 1.000 - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
30. si:dkey-200c24.1 si:dkey-200c24.1 7 1 - - - - 1.000 - - - -
31. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - 1.000 - - - -
32. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - 1.000 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
33. VGLL2 VGLL2 13 1 - - - - - - 1.000 - -
34. si:dkeyp-46h3.5 ENSDARG00000089515 1 1 - - - - 1.000 - - - - si:dkeyp-46h3.5 [Source:ZFIN;Acc:ZDB-GENE-060503-937]
35. bpnt1 ENSDARG00000043684 78 1 - - - - 1.000 - - - - bisphosphate nucleotidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-46]
36. SNORA30 SNORA30 1 1 - - - - 1.000 - - - -
37. si:ch211-66k16.24 si:ch211-66k16.24 1 1 - - - - 1.000 - - - -
38. zgc:195077 ENSDARG00000070852 1 1 - - - - - - 1.000 - - zgc:195077 [Source:ZFIN;Acc:ZDB-GENE-080724-9]
39. jak3 ENSDARG00000010252 11 1 - - - - 1.000 - - - - Janus kinase 3 (a protein tyrosine kinase, leukocyte) [Source:ZFIN;Acc:ZDB-GENE-070725-4]
40. casp3b ENSDARG00000055045 54 1 - - - - - - 1.000 - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
41. si:dkey-201i6.6 si:dkey-201i6.6 2 1 - - - - - - 1.000 - -
42. RECK ENSDARG00000090039 15 1 - - - - - - 1.000 - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
43. C4H12orf39 C4H12orf39 73 1 - - - - - - 1.000 - -
44. FJX1 ENSDARG00000035873 22 1 - - - - - - 1.000 - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
45. si:ch211-250n8.1 ENSDARG00000088736 4 1 - - - - - - 1.000 - - si:ch211-250n8.1 [Source:ZFIN;Acc:ZDB-GENE-130603-2]
46. FRMPD1_2 FRMPD1_2 2 1 - - - - 1.000 - - - -
47. TMEM255B 1 1 - - - - 1.000 - - - - transmembrane protein 255B
48. si:dkey-1j5.4 ENSDARG00000073747 1 1 - - - - - - 1.000 - - si:dkey-1j5.4 [Source:ZFIN;Acc:ZDB-GENE-130603-91]
49. socs1a ENSDARG00000038095 20 1 - - - - - - 1.000 - - suppressor of cytokine signaling 1a [Source:ZFIN;Acc:ZDB-GENE-040801-205]
50. thnsl2 ENSDARG00000032584 59 1 - - - - - - 1.000 - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
51. snx33 ENSDARG00000014954 45 1 - - - - - - 1.000 - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
52. KSR1 KSR1 8 1 - - - - - - 1.000 - -
53. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 1 - - - - - - 1.000 - - moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
54. APOH APOH 2 1 - - - - 1.000 - - - -
55. BX005410.2 BX005410.2 44 1 - - - - 1.000 - - - -
56. si:ch73-343l4.3 ENSDARG00000092502 1 1 - - - - 1.000 - - - - si:ch73-343l4.3 [Source:ZFIN;Acc:ZDB-GENE-090313-155]
57. AL773596.2 AL773596.2 2 1 - - - - 1.000 - - - -
58. lrrc38 lrrc38 20 1 - - - - - - 1.000 - -
59. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - - - 1.000 - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
60. gpr155a ENSDARG00000090804 27 1 - - - - - - 1.000 - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
61. ACTN4 ENSDARG00000099786 25 1 - - - - - - 1.000 - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
62. he1b 11900 1 - - - - - - 1.000 - - hatching enzyme 1b
63. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - 1.000 - - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
64. pvalb5 ENSDARG00000032836 242 1 - - - - - - 1.000 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
65. TRIM14_12 TRIM14_12 1 1 - - - - - - 1.000 - -
66. ENDOD1_1 ENDOD1_1 0 1 - - - - - - 1.000 - -
67. ROCK2 ROCK2 8 1 - - - - - - 1.000 - -
68. GPRIN1 10 1 - - - - - - 1.000 - - G protein regulated inducer of neurite outgrowth 1
69. ebf1b ENSDARG00000069196 64 1 - - - - - - 1.000 - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
70. ENDOD1_2 ENDOD1_2 2 1 - - - - 1.000 - - - -
71. cmlc1 ENSDARG00000032976 455 1 - - - - - - 1.000 - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
72. TXNRD2 TXNRD2 14 1 - - - - - - 1.000 - -
73. PSMB11_1 PSMB11_1 2 1 - - - - 1.000 - - - -
74. si:dkey-57b6.4 si:dkey-57b6.4 3 1 - - - - - - 1.000 - -
75. adrb1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - - - 1.000 - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
76. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - - 1.000 - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
77. fam151a ENSDARG00000058218 40 1 - - - - - - 1.000 - - family with sequence similarity 151, member A [Source:ZFIN;Acc:ZDB-GENE-070705-105]
78. BCAM ENSDARG00000090190 19 1 - - - - - - 1.000 - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
79. CABZ01074647.1 CABZ01074647.1 1 1 - - - - 1.000 - - - -
80. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - 1.000 - - - -
81. BX897747.3_1 BX897747.3_1 1 1 - - - - 1.000 - - - -
82. FMNL1 FMNL1 7 1 - - - - 1.000 - - - -
83. myd88 ENSDARG00000010169 86 1 - - - - - - 1.000 - - myeloid differentiation primary response 88 [Source:ZFIN;Acc:ZDB-GENE-040219-3]
84. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - - - 1.000 - - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
85. lrmp ENSDARG00000045574 26 1 - - - - - - 1.000 - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
86. MFAP4_8 MFAP4_8 1 1 - - - - 1.000 - - - -
87. si:ch211-203l7.3 si:ch211-203l7.3 0 1 - - - - - - 1.000 - -
88. kcnj1a.2 ENSDARG00000090866 8 1 - - - - - - 1.000 - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050327-22]
89. GRM1 GRM1 4 1 - - - - - - 1.000 - -
90. CT027682.3 CT027682.3 0 1 - - - - - - 1.000 - -
91. GPR82 GPR82 127 1 - - - - 1.000 - - - -
92. CU681840.1 CU681840.1 3 1 - - - - - - 1.000 - -
93. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - - - 1.000 - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
94. akap1a ENSDARG00000089802 5 1 - - - - - - 1.000 - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
95. SLC9B1 SLC9B1 137 1 - - - - - - 1.000 - -
96. zgc:66432 zgc:66432 16 1 - - - - 1.000 - - - -
97. usp53b ENSDARG00000076499 16 1 - - - - - - 1.000 - - ubiquitin specific peptidase 53b [Source:ZFIN;Acc:ZDB-GENE-090312-168]
98. ppapdc1a ppapdc1a 1 1 - - - - 1.000 - - - -
99. atp2b1b ENSDARG00000007788 56 1 - - - - - - 1.000 - - ATPase plasma membrane Ca2+ transporting 1b [Source:ZFIN;Acc:ZDB-GENE-080409-1]
100. BTBD17_1 BTBD17_1 42 1 - - - - - - 1.000 - -

There are 208 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA