Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-93g21.3

Gene Name Gene ID Reads Annotation
si:ch211-93g21.3 si:ch211-93g21.3 1










Genes with expression patterns similar to si:ch211-93g21.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-93g21.3 si:ch211-93g21.3 1 2 - - - - 1.000 - 1.000 - -
2. crybb3 ENSDARG00000041301 48 1.616 - - - - 0.764 - 0.852 - - crystallin, beta B3 [Source:ZFIN;Acc:ZDB-GENE-060130-2]
3. si:dkeyp-46h3.5 ENSDARG00000089515 1 1 - - - - 1.000 - - - - si:dkeyp-46h3.5 [Source:ZFIN;Acc:ZDB-GENE-060503-937]
4. PSMB11_1 PSMB11_1 2 1 - - - - 1.000 - - - -
5. CR384075.2 CR384075.2 1 1 - - - - 1.000 - - - -
6. si:ch211-223g7.7 si:ch211-223g7.7 1 1 - - - - - - 1.000 - -
7. si:dkey-61f9.2 2 1 - - - - 1.000 - - - - si:dkey-61f9.2
8. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - 1.000 - - - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
9. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - - 1.000 - - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
10. cmlc1 ENSDARG00000032976 455 1 - - - - - - 1.000 - - cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
11. msnb ENSDARG00000028740, ENSDARG00000109311, ENSDARG00000110190 24 1 - - - - - - 1.000 - - moesin b [Source:ZFIN;Acc:ZDB-GENE-030717-7]
12. zgc:173716 9 1 - - - - - - 1.000 - - zgc:173716
13. casp3b ENSDARG00000055045 54 1 - - - - - - 1.000 - - caspase 3, apoptosis-related cysteine peptidase b [Source:ZFIN;Acc:ZDB-GENE-070607-1]
14. BX323819.1 BX323819.1 9 1 - - - - - - 1.000 - -
15. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - - - 1.000 - - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
16. BCAM ENSDARG00000090190 19 1 - - - - - - 1.000 - - basal cell adhesion molecule (Lutheran blood group) [Source:ZFIN;Acc:ZDB-GENE-060929-620]
17. mfsd10 ENSDARG00000086786 304 1 - - - - - - 1.000 - - major facilitator superfamily domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050417-154]
18. NPC1L1 ENSDARG00000099558 0 1 - - - - - - 1.000 - - NPC1 like intracellular cholesterol transporter 1 [Source:HGNC Symbol;Acc:HGNC:7898]
19. si:ch73-343l4.6 ENSDARG00000025547, ENSDARG00000095127 1 1 - - - - 1.000 - - - - si:ch73-343l4.6 [Source:ZFIN;Acc:ZDB-GENE-090313-158]
20. si:ch211-244h4.2 si:ch211-244h4.2 1 1 - - - - 1.000 - - - -
21. trim35-29 ENSDARG00000055730 24 1 - - - - - - 1.000 - - tripartite motif containing 35-29 [Source:ZFIN;Acc:ZDB-GENE-041114-35]
22. ACTN4 ENSDARG00000099786 25 1 - - - - - - 1.000 - - actinin, alpha 4 [Source:ZFIN;Acc:ZDB-GENE-030131-940]
23. KSR1 KSR1 8 1 - - - - - - 1.000 - -
24. si:ch211-250o15.5 si:ch211-250o15.5 1 1 - - - - - - 1.000 - -
25. GPR82 GPR82 127 1 - - - - 1.000 - - - -
26. BTBD17_1 BTBD17_1 42 1 - - - - - - 1.000 - -
27. ncs1b ENSDARG00000054186 252 1 - - - - - - 1.000 - - neuronal calcium sensor 1b [Source:ZFIN;Acc:ZDB-GENE-050930-1]
28. zgc:194189 ENSDARG00000008010 26 1 - - - - - - 1.000 - - zgc:194189 [Source:ZFIN;Acc:ZDB-GENE-081022-71]
29. atm_1 ENSDARG00000002385 1 1 - - - - 1.000 - - - - ATM serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-040809-1]
30. CU681840.1 CU681840.1 3 1 - - - - - - 1.000 - -
31. CU855711.1 ENSDARG00000088643 6 1 - - - - 1.000 - - - - legumain-like [Source:NCBI gene;Acc:108191752]
32. tex30 ENSDARG00000030636, ENSDARG00000111168 36 1 - - - - - - 1.000 - - testis expressed 30 [Source:ZFIN;Acc:ZDB-GENE-041210-219]
33. PLA2G10 PLA2G10 9 1 - - - - - - 1.000 - -
34. pvalb5 ENSDARG00000032836 242 1 - - - - - - 1.000 - - parvalbumin 5 [Source:ZFIN;Acc:ZDB-GENE-050417-336]
35. he1b 11900 1 - - - - - - 1.000 - - hatching enzyme 1b
36. si:ch73-343l4.3 ENSDARG00000092502 1 1 - - - - 1.000 - - - - si:ch73-343l4.3 [Source:ZFIN;Acc:ZDB-GENE-090313-155]
37. MXRA5 MXRA5 58 1 - - - - - - 1.000 - -
38. CABZ01074647.1 CABZ01074647.1 1 1 - - - - 1.000 - - - -
39. zgc:172014 ENSDARG00000101775 3 1 - - - - 1.000 - - - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
40. ZNF70_6 ZNF70_6 15 1 - - - - 1.000 - - - -
41. MFAP4_8 MFAP4_8 1 1 - - - - 1.000 - - - -
42. akap1a ENSDARG00000089802 5 1 - - - - - - 1.000 - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
43. lrrc38 lrrc38 20 1 - - - - - - 1.000 - -
44. TRIM14_10 TRIM14_10 9 1 - - - - - - 1.000 - -
45. BX323854.1 ENSDARG00000030778 3 1 - - - - - - 1.000 - -
46. si:dkey-11d20.4 si:dkey-11d20.4 6 1 - - - - - - 1.000 - -
47. hs3st4 ENSDARG00000052648 6 1 - - - - 1.000 - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
48. si:ch211-66k16.24 si:ch211-66k16.24 1 1 - - - - 1.000 - - - -
49. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - 1.000 - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
50. si:ch211-57m13.8 ENSDARG00000078271 1 1 - - - - 1.000 - - - - si:ch211-57m13.8 [Source:ZFIN;Acc:ZDB-GENE-110411-238]
51. tmem37 ENSDARG00000059305 19 1 - - - - - - 1.000 - - transmembrane protein 37 [Source:ZFIN;Acc:ZDB-GENE-040426-2208]
52. thnsl2 ENSDARG00000032584 59 1 - - - - - - 1.000 - - threonine synthase-like 2 [Source:ZFIN;Acc:ZDB-GENE-051127-19]
53. BX005410.2 BX005410.2 44 1 - - - - 1.000 - - - -
54. PLCG2 ENSDARG00000068763 11 1 - - - - - - 1.000 - - phospholipase C, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9532]
55. ROCK2 ROCK2 8 1 - - - - - - 1.000 - -
56. zgc:195077 ENSDARG00000070852 1 1 - - - - - - 1.000 - - zgc:195077 [Source:ZFIN;Acc:ZDB-GENE-080724-9]
57. lrmp ENSDARG00000045574 26 1 - - - - - - 1.000 - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
58. RNH1_2 RNH1_2 12 1 - - - - - - 1.000 - -
59. GABRA2_1 ENSDARG00000113737 5 1 - - - - 1.000 - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
60. POLQ ENSDARG00000044622, ENSDARG00000110374 94 1 - - - - - - 1.000 - - polymerase (DNA directed), theta [Source:ZFIN;Acc:ZDB-GENE-040724-232]
61. ebf1b ENSDARG00000069196 64 1 - - - - - - 1.000 - - early B cell factor 1b [Source:ZFIN;Acc:ZDB-GENE-090814-2]
62. CR762484.2 CR762484.2 42 1 - - - - - - 1.000 - -
63. tusc3 ENSDARG00000078854 4 1 - - - - - - 1.000 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
64. TRIM14_12 TRIM14_12 1 1 - - - - - - 1.000 - -
65. qkib ENSDARG00000002026 15 1 - - - - - - 1.000 - - QKI, KH domain containing, RNA binding b [Source:ZFIN;Acc:ZDB-GENE-081028-54]
66. BX511065.1 BX511065.1 214 1 - - - - - - 1.000 - -
67. ponzr6 ENSDARG00000036382 16 1 - - - - - - 1.000 - - plac8 onzin related protein 6 [Source:ZFIN;Acc:ZDB-GENE-081104-326]
68. si:dkey-200c24.1 si:dkey-200c24.1 7 1 - - - - 1.000 - - - -
69. st3gal1l ENSDARG00000079310 10 1 - - - - - - 1.000 - - ST3 beta-galactoside alpha-2,3-sialyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-060321-2]
70. CT573253.1 CT573253.1 4 1 - - - - 1.000 - - - -
71. CU459012.3 ENSDARG00000109688 1 1 - - - - 1.000 - - - -
72. zgc:198241 ENSDARG00000076483, ENSDARG00000116081 3 1 - - - - - - 1.000 - - zgc:198241 [Source:ZFIN;Acc:ZDB-GENE-080303-14]
73. VGLL2 VGLL2 13 1 - - - - - - 1.000 - -
74. lmod2b ENSDARG00000045864 63 1 - - - - - - 1.000 - - leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
75. si:dkey-30g5.2 si:dkey-30g5.2 1 1 - - - - 1.000 - - - -
76. ENDOD1_1 ENDOD1_1 0 1 - - - - - - 1.000 - -
77. si:ch211-197g15.5 si:ch211-197g15.5 10 1 - - - - 1.000 - - - -
78. gpr75 ENSDARG00000098526 32 1 - - - - - - 1.000 - - G protein-coupled receptor 75 [Source:ZFIN;Acc:ZDB-GENE-100316-3]
79. si:ch211-203l7.3 si:ch211-203l7.3 0 1 - - - - - - 1.000 - -
80. FRMPD1_2 FRMPD1_2 2 1 - - - - 1.000 - - - -
81. ppapdc1a ppapdc1a 1 1 - - - - 1.000 - - - -
82. FJX1 ENSDARG00000035873 22 1 - - - - - - 1.000 - - four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
83. FMNL1 FMNL1 7 1 - - - - 1.000 - - - -
84. CU695006.1 CU695006.1 4 1 - - - - - - 1.000 - -
85. BX897747.3_1 BX897747.3_1 1 1 - - - - 1.000 - - - -
86. HELZ2 ENSDARG00000012600 2 1 - - - - 1.000 - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
87. XCR1 XCR1 9 1 - - - - - - 1.000 - -
88. WIPF1 WIPF1 32 1 - - - - - - 1.000 - -
89. TMEM255B 1 1 - - - - 1.000 - - - - transmembrane protein 255B
90. RELL2 ENSDARG00000071876, ENSDARG00000112094 68 1 - - - - - - 1.000 - - RELT-like 2 [Source:ZFIN;Acc:ZDB-GENE-060421-6581]
91. asb2a_1 asb2a_1 6 1 - - - - - - 1.000 - -
92. RNF224 RNF224 5 1 - - - - 1.000 - - - -
93. BX572077.3 BX572077.3 20 1 - - - - - - 1.000 - -
94. cacng5a ENSDARG00000003326 17 1 - - - - - - 1.000 - - calcium channel, voltage-dependent, gamma subunit 5a [Source:ZFIN;Acc:ZDB-GENE-120104-4]
95. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1 - - - - - - 1.000 - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
96. cyp2ad2 ENSDARG00000021172 2 1 - - - - 1.000 - - - - cytochrome P450, family 2, subfamily AD, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-020812-2]
97. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - 1.000 - - - -
98. si:dkey-279j5.1 ENSDARG00000101459 17 1 - - - - - - 1.000 - - si:dkey-279j5.1 [Source:ZFIN;Acc:ZDB-GENE-120703-27]
99. CT027682.3 CT027682.3 0 1 - - - - - - 1.000 - -
100. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - - 1.000 - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]

There are 208 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA