Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-93f2.1

Gene Name Gene ID Reads Annotation
si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]










Genes with expression patterns similar to si:ch211-93f2.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-93f2.1 ENSDARG00000101726, ENSDARG00000104818 708 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-93f2.1 [Source:ZFIN;Acc:ZDB-GENE-041014-96]
2. cib1 ENSDARG00000103118 291 2.33 0.859 - - - - 0.721 - - 0.750 calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
3. glipr2l ENSDARG00000016837 440 2.231 0.731 - - 0.794 - 0.706 - - - GLI pathogenesis-related 2, like [Source:ZFIN;Acc:ZDB-GENE-041010-53]
4. dyrk1ab ENSDARG00000023814 1769 1.835 0.838 0.997 - - - - - - - dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 1A, b [Source:ZFIN;Acc:ZDB-GENE-030131-5677]
5. zgc:111974 zgc:111974 1386 1.811 0.816 0.995 - - - - - - -
6. clpxb ENSDARG00000067796 1918 1.8 0.806 0.994 - - - - - - - caseinolytic mitochondrial matrix peptidase chaperone subunit b [Source:ZFIN;Acc:ZDB-GENE-130404-1]
7. copb2 ENSDARG00000038743, ENSDARG00000114286 6404 1.782 - 0.969 - - - - 0.813 - - coatomer protein complex, subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-010724-7]
8. fam83h fam83h 1448 1.765 - 0.989 - 0.776 - - - - -
9. si:dkey-183n20.2 si:dkey-183n20.2 210 1.751 - - - 0.870 - 0.881 - - -
10. si:ch73-375g18.1 ENSDARG00000075024 2431 1.724 0.734 0.990 - - - - - - - si:ch73-375g18.1 [Source:ZFIN;Acc:ZDB-GENE-110408-56]
11. swt1 ENSDARG00000094010 472 1.718 0.852 - - 0.866 - - - - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
12. gpd1c ENSDARG00000036942 869 1.714 - 0.997 - - - - 0.717 - - glycerol-3-phosphate dehydrogenase 1c [Source:ZFIN;Acc:ZDB-GENE-040426-2576]
13. ube2f ENSDARG00000025754 1946 1.714 0.717 0.997 - - - - - - - ubiquitin-conjugating enzyme E2F (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2557]
14. si:dkey-169i5.4 ENSDARG00000077862 511 1.688 0.824 - - 0.864 - - - - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
15. mpv17l2 ENSDARG00000056367, ENSDARG00000112107 352 1.688 0.830 - - 0.858 - - - - - MPV17 mitochondrial membrane protein-like 2 [Source:ZFIN;Acc:ZDB-GENE-040718-306]
16. thap4 ENSDARG00000077323 434 1.686 0.855 - - 0.831 - - - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
17. atpv0e1 atpv0e1 1957 1.685 0.762 0.923 - - - - - - -
18. NFRKB ENSDARG00000091512 646 1.673 0.887 - - 0.786 - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
19. elovl6l ENSDARG00000038639 1184 1.672 0.831 - - - - - 0.841 - - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
20. slc31a1 ENSDARG00000013961, ENSDARG00000110656 4072 1.669 0.737 0.932 - - - - - - - solute carrier family 31 (copper transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040415-3]
21. BX005085.2 ENSDARG00000098122 196 1.666 0.873 - - 0.793 - - - - -
22. c7a ENSDARG00000042172 716 1.66 0.873 - - - - - 0.787 - - complement component 7a [Source:ZFIN;Acc:ZDB-GENE-081104-392]
23. tax1bp3 ENSDARG00000059177 4324 1.641 0.910 - - - - - 0.731 - - Tax1 (human T-cell leukemia virus type I) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2830]
24. CABZ01064972.1 ENSDARG00000098966 199 1.635 0.710 - - 0.925 - - - - - uncharacterized LOC100538212 [Source:NCBI gene;Acc:100538212]
25. rbp1a rbp1a 9847 1.631 0.733 0.898 - - - - - - -
26. vps11 ENSDARG00000036338 421 1.628 0.876 - - 0.752 - - - - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
27. mettl5 ENSDARG00000068893 159 1.627 - - - 0.829 - - - - 0.798 methyltransferase like 5 [Source:ZFIN;Acc:ZDB-GENE-041010-21]
28. ERO1LB ERO1LB 1433 1.613 0.882 - - 0.731 - - - - -
29. TSSC4 ENSDARG00000036144 1994 1.611 0.842 - - - - 0.769 - - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
30. ankrd10b ENSDARG00000004771 654 1.61 0.882 - - 0.728 - - - - - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
31. SH3D21 ENSDARG00000099448 1726 1.604 0.874 - - - - - 0.730 - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
32. si:ch73-73d17.3 si:ch73-73d17.3 925 1.598 0.879 - - - - - 0.719 - -
33. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 1.588 0.829 - - - - - 0.759 - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
34. orc1 ENSDARG00000039217, ENSDARG00000115400 795 1.587 0.854 - - - - 0.733 - - - origin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
35. fam89a ENSDARG00000079979 4375 1.573 0.843 - - - - - 0.730 - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
36. chmp3 ENSDARG00000038064 577 1.57 0.823 - - - - 0.747 - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
37. SIRT5 ENSDARG00000039684 1124 1.551 - - - 0.781 - - 0.770 - - sirtuin 5 [Source:ZFIN;Acc:ZDB-GENE-040718-349]
38. abat ENSDARG00000006031 2143 1.548 0.811 - - - - - 0.737 - - 4-aminobutyrate aminotransferase [Source:ZFIN;Acc:ZDB-GENE-031006-4]
39. ube3c ENSDARG00000035978, ENSDARG00000112229 787 1.541 0.833 - - - - 0.708 - - - ubiquitin protein ligase E3C [Source:ZFIN;Acc:ZDB-GENE-040426-1211]
40. fam162a ENSDARG00000063344 1812 1.531 0.747 - - - - 0.784 - - - family with sequence similarity 162, member A [Source:ZFIN;Acc:ZDB-GENE-030131-8307]
41. map2k1 ENSDARG00000007825 373 1.531 0.828 - - - - - 0.703 - - mitogen-activated protein kinase kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2759]
42. mycbp ENSDARG00000091001 1511 1.523 0.753 - - 0.770 - - - - - c-myc binding protein [Source:ZFIN;Acc:ZDB-GENE-060331-97]
43. zdhhc8b ENSDARG00000018508 1327 1.509 - - - - - 0.750 0.759 - - zinc finger, DHHC-type containing 8b [Source:ZFIN;Acc:ZDB-GENE-030407-3]
44. nfybb ENSDARG00000045611, ENSDARG00000110926 350 1.509 - - - - - 0.804 0.705 - - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
45. ormdl1 ENSDARG00000014333 1589 1.498 0.750 - - - - - 0.748 - - ORMDL sphingolipid biosynthesis regulator 1 [Source:ZFIN;Acc:ZDB-GENE-030616-529]
46. CU915738.1 CU915738.1 3723 1.486 - 0.722 - - - - 0.764 - -
47. gstt1b ENSDARG00000017388, ENSDARG00000112401 2107 1.484 0.777 - - - - 0.707 - - - glutathione S-transferase theta 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1491]
48. POR POR 973 1.473 0.751 - - - - - - - 0.722
49. MPC2 ENSDARG00000024478 4194 1.471 0.735 0.736 - - - - - - - mitochondrial pyruvate carrier 2 [Source:ZFIN;Acc:ZDB-GENE-030131-330]
50. SLC25A24 ENSDARG00000008568 2005 1.469 - - 0.728 - - - 0.741 - - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:ZFIN;Acc:ZDB-GENE-040912-183]
51. axin2 ENSDARG00000100149 4223 1.466 0.749 - - - - - 0.717 - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
52. plxnb2a ENSDARG00000003811, ENSDARG00000094799 1662 1.417 0.702 - - - - - 0.715 - - plexin b2a [Source:ZFIN;Acc:ZDB-GENE-030131-8917]
53. MTMR11 ENSDARG00000069755 917 0.999 - 0.999 - - - - - - - myotubularin related protein 11 [Source:ZFIN;Acc:ZDB-GENE-130530-726]
54. zgc:100829 ENSDARG00000015557 1686 0.998 - 0.998 - - - - - - - zgc:100829 [Source:ZFIN;Acc:ZDB-GENE-040801-54]
55. PPIC ENSDARG00000104343 662 0.998 - 0.998 - - - - - - - peptidylprolyl isomerase C [Source:ZFIN;Acc:ZDB-GENE-170217-1]
56. ccsapb ENSDARG00000040085 784 0.998 - 0.998 - - - - - - - centriole, cilia and spindle-associated protein b [Source:ZFIN;Acc:ZDB-GENE-081107-51]
57. suv39h1b ENSDARG00000055753 1540 0.998 - 0.998 - - - - - - - suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
58. nubp1 ENSDARG00000055472 1182 0.998 - 0.998 - - - - - - - nucleotide binding protein 1 (MinD homolog, E. coli) [Source:ZFIN;Acc:ZDB-GENE-050417-471]
59. SYTL1 ENSDARG00000070094 282 0.997 - 0.997 - - - - - - - synaptotagmin-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-439]
60. WDR81 ENSDARG00000079702 822 0.997 - 0.997 - - - - - - - WD repeat domain 81 [Source:ZFIN;Acc:ZDB-GENE-030131-3389]
61. aldh3a2b ENSDARG00000029381 2187 0.997 - 0.997 - - - - - - - aldehyde dehydrogenase 3 family, member A2b [Source:ZFIN;Acc:ZDB-GENE-040912-103]
62. wu:fi42e03 ENSDARG00000070709 276 0.997 - 0.997 - - - - - - - wu:fi42e03 [Source:ZFIN;Acc:ZDB-GENE-030131-6284]
63. prosc 925 0.997 - 0.997 - - - - - - - pyridoxal phosphate binding protein, transcript variant X1
64. STARD4 ENSDARG00000102477 411 0.997 - 0.997 - - - - - - - StAR-related lipid transfer (START) domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-168]
65. olig4 ENSDARG00000052610, ENSDARG00000116678 1704 0.997 - 0.997 - - - - - - - oligodendrocyte transcription factor 4 [Source:ZFIN;Acc:ZDB-GENE-030131-3580]
66. ahsa1l ahsa1l 2366 0.997 - 0.997 - - - - - - -
67. thbs4a ENSDARG00000102777 625 0.997 - 0.997 - - - - - - - thrombospondin 4a [Source:ZFIN;Acc:ZDB-GENE-080215-11]
68. trnau1apa ENSDARG00000101323 911 0.997 - 0.997 - - - - - - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
69. ctage5 530 0.997 - 0.997 - - - - - - - CTAGE family, member 5, transcript variant X8
70. prune2 ENSDARG00000059423, ENSDARG00000116519 646 0.997 - 0.997 - - - - - - - prune homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050309-222]
71. angptl3 ENSDARG00000044365 574 0.997 - 0.997 - - - - - - - angiopoietin-like 3 [Source:ZFIN;Acc:ZDB-GENE-010817-3]
72. cnksr2b ENSDARG00000073707 664 0.997 - 0.997 - - - - - - - connector enhancer of kinase suppressor of Ras 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8048]
73. CAPN1_1 ENSDARG00000055338 288 0.997 - 0.997 - - - - - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
74. tlk2 ENSDARG00000010779, ENSDARG00000112127 751 0.997 - 0.997 - - - - - - - tousled-like kinase 2 [Source:ZFIN;Acc:ZDB-GENE-060623-36]
75. eya2 ENSDARG00000018984 1768 0.997 - 0.997 - - - - - - - EYA transcriptional coactivator and phosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-24]
76. shda ENSDARG00000094243 929 0.997 - 0.997 - - - - - - - Src homology 2 domain containing transforming protein D, a [Source:ZFIN;Acc:ZDB-GENE-070912-58]
77. ppfibp2b ENSDARG00000029168 961 0.997 - 0.997 - - - - - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
78. esrrga ENSDARG00000004861 805 0.997 - 0.997 - - - - - - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
79. kctd6b ENSDARG00000023703, ENSDARG00000116734 2621 0.996 - 0.996 - - - - - - - potassium channel tetramerization domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-040718-14]
80. xylt1 ENSDARG00000061248 2357 0.996 - 0.996 - - - - - - - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
81. galns ENSDARG00000051853, ENSDARG00000113387 347 0.996 - 0.996 - - - - - - - galactosamine (N-acetyl)-6-sulfatase [Source:ZFIN;Acc:ZDB-GENE-070112-1152]
82. gfap ENSDARG00000025301 5584 0.996 - 0.996 - - - - - - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
83. phldb1a ENSDARG00000061093 1637 0.996 - 0.996 - - - - - - - pleckstrin homology-like domain, family B, member 1a [Source:ZFIN;Acc:ZDB-GENE-060526-272]
84. wu:fb54a03 wu:fb54a03 1722 0.996 - 0.996 - - - - - - -
85. zbtb44 ENSDARG00000061110, ENSDARG00000116194 1106 0.996 - 0.996 - - - - - - - zinc finger and BTB domain containing 44 [Source:ZFIN;Acc:ZDB-GENE-060526-201]
86. snx27b ENSDARG00000016977 2768 0.996 - 0.996 - - - - - - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
87. ccnc ENSDARG00000009607 1240 0.996 - 0.996 - - - - - - - cyclin C [Source:ZFIN;Acc:ZDB-GENE-030131-7369]
88. matr3l1.1 ENSDARG00000000394, ENSDARG00000001162 3757 0.996 - 0.996 - - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
89. sema4ba ENSDARG00000074414 1194 0.996 - 0.996 - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ba [Source:ZFIN;Acc:ZDB-GENE-070705-31]
90. nkain1 ENSDARG00000006859 1961 0.996 - 0.996 - - - - - - - sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
91. rbm14b ENSDARG00000103834 1597 0.996 - 0.996 - - - - - - - RNA binding motif protein 14b [Source:ZFIN;Acc:ZDB-GENE-040426-2455]
92. ddx42 ENSDARG00000037928 1659 0.996 - 0.996 - - - - - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
93. mrpl14 ENSDARG00000068886 1991 0.996 - 0.996 - - - - - - - mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
94. CABZ01079490.1 CABZ01079490.1 1808 0.996 - 0.996 - - - - - - -
95. sema3ab ENSDARG00000042210, ENSDARG00000110306 2178 0.995 - 0.995 - - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Ab [Source:ZFIN;Acc:ZDB-GENE-991209-6]
96. bmpr1bb ENSDARG00000102742 1036 0.995 - 0.995 - - - - - - - bone morphogenetic protein receptor, type IBb [Source:ZFIN;Acc:ZDB-GENE-090610-1]
97. smox ENSDARG00000036967 3816 0.995 - 0.995 - - - - - - - spermine oxidase [Source:ZFIN;Acc:ZDB-GENE-031201-3]
98. setbp1 ENSDARG00000093799 4499 0.995 - 0.995 - - - - - - - SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
99. kpna5 ENSDARG00000042030 1643 0.995 - 0.995 - - - - - - - karyopherin alpha 5 (importin alpha 6) [Source:ZFIN;Acc:ZDB-GENE-050522-22]
100. cks1b ENSDARG00000007971 2739 0.995 - 0.995 - - - - - - - CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]

There are 987 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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