Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-89o9.6

Gene Name Gene ID Reads Annotation
si:ch211-89o9.6 ENSDARG00000075639 382 si:ch211-89o9.6 [Source:ZFIN;Acc:ZDB-GENE-030131-7155]










Genes with expression patterns similar to si:ch211-89o9.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-89o9.6 ENSDARG00000075639 382 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-89o9.6 [Source:ZFIN;Acc:ZDB-GENE-030131-7155]
2. sco2 ENSDARG00000045555 219 1.743 - 0.877 - - - - 0.866 - - SCO2 cytochrome c oxidase assembly protein [Source:ZFIN;Acc:ZDB-GENE-041210-173]
3. pik3cg ENSDARG00000017757 157 1.607 - 0.740 - - - - 0.867 - - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040426-2532]
4. ccrl1b ccrl1b 154 1.595 - - - - - 0.773 0.822 - -
5. FHOD3 FHOD3 422 1.542 0.707 - - - - - 0.835 - -
6. mob3a ENSDARG00000019113 2551 1.449 - - - - - 0.749 0.700 - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
7. rxrgb ENSDARG00000004697 332 0.984 - 0.984 - - - - - - - retinoid X receptor, gamma b [Source:ZFIN;Acc:ZDB-GENE-040718-34]
8. TRIM35_8 TRIM35_8 43 0.948 - 0.948 - - - - - - -
9. hsd17b7_1 ENSDARG00000088140 36 0.938 - - - - - - 0.938 - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
10. CR478286.1_1 CR478286.1_1 306 0.911 - - - - - - 0.911 - -
11. cdh13 ENSDARG00000014215 106 0.901 - - - - - - 0.901 - - cadherin 13, H-cadherin (heart) [Source:ZFIN;Acc:ZDB-GENE-060503-286]
12. HERC4 ENSDARG00000059936 369 0.901 - - - - - - 0.901 - - HECT and RLD domain containing E3 ubiquitin protein ligase 4 [Source:ZFIN;Acc:ZDB-GENE-070801-1]
13. btbd11a ENSDARG00000063255 366 0.9 - 0.900 - - - - - - - BTB (POZ) domain containing 11a [Source:ZFIN;Acc:ZDB-GENE-050419-142]
14. egln3 ENSDARG00000032553 280 0.899 - - - - - - 0.899 - - egl-9 family hypoxia-inducible factor 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2541]
15. cdk4 ENSDARG00000087937 80 0.899 - - - - - - 0.899 - - cyclin-dependent kinase 4 [Source:ZFIN;Acc:ZDB-GENE-060929-974]
16. inpp5f ENSDARG00000061437 1228 0.896 - - - - - - 0.896 - - inositol polyphosphate-5-phosphatase F [Source:ZFIN;Acc:ZDB-GENE-041111-194]
17. dusp7 ENSDARG00000101413 1307 0.893 - - - - - - 0.893 - - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
18. mtmr1b ENSDARG00000022378 168 0.889 - - - 0.889 - - - - - myotubularin related protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-48]
19. gas8 ENSDARG00000101431 140 0.888 - - - - - - 0.888 - - growth arrest-specific 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1980]
20. si:ch211-197g15.8 ENSDARG00000094984 218 0.888 - - - - - - 0.888 - - si:ch211-197g15.8 [Source:ZFIN;Acc:ZDB-GENE-050208-377]
21. CCDC23 CCDC23 54 0.88 - 0.880 - - - - - - -
22. irx2a ENSDARG00000001785 262 0.88 - 0.880 - - - - - - - iroquois homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1446]
23. si:dkey-222l20.1 si:dkey-222l20.1 375 0.879 - - - - - - 0.879 - -
24. si:zfos-364h11.1 99 0.879 - - - - - - 0.879 - - si:zfos-364h11.1, transcript variant X4
25. hgfb ENSDARG00000079076 168 0.878 - - - - - - 0.878 - - hepatocyte growth factor b [Source:ZFIN;Acc:ZDB-GENE-041014-3]
26. AL840631.2 AL840631.2 326 0.877 0.877 - - - - - - - -
27. AP5B1 ENSDARG00000078805 62 0.873 - - - - - - 0.873 - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
28. KCNQ2 KCNQ2 146 0.872 - - - - - - 0.872 - -
29. lrrc9 ENSDARG00000054352 25 0.871 - 0.871 - - - - - - - leucine rich repeat containing 9 [Source:ZFIN;Acc:ZDB-GENE-080917-56]
30. CMTM8_1 CMTM8_1 123 0.871 - - - - - - 0.871 - -
31. mlh1 ENSDARG00000025948 130 0.87 - - - - - - 0.870 - - mutL homolog 1, colon cancer, nonpolyposis type 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-1600]
32. alkbh4 ENSDARG00000052247 306 0.869 - - - - - - 0.869 - - alkB homolog 4, lysine demthylase [Source:ZFIN;Acc:ZDB-GENE-060526-275]
33. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 0.868 - - - 0.868 - - - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
34. dusp3a ENSDARG00000061255, ENSDARG00000113934 328 0.865 - - - - - - 0.865 - - dual specificity phosphatase 3a [Source:ZFIN;Acc:ZDB-GENE-111207-3]
35. MYPN 404 0.865 - - - 0.865 - - - - - myopalladin, transcript variant X1
36. arpc5lb ENSDARG00000035433 726 0.863 - - - - - - 0.863 - - actin related protein 2/3 complex, subunit 5-like, b [Source:ZFIN;Acc:ZDB-GENE-060531-161]
37. smtla ENSDARG00000038191 42 0.863 - - - - - - 0.863 - - somatolactin alpha [Source:ZFIN;Acc:ZDB-GENE-060123-2]
38. napepld ENSDARG00000009252 228 0.862 - - - - - - 0.862 - - N-acyl phosphatidylethanolamine phospholipase D [Source:ZFIN;Acc:ZDB-GENE-030131-3856]
39. fer ENSDARG00000012196 83 0.862 - - - - - - 0.862 - - fer (fps/fes related) tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-060526-234]
40. zgc:114046 ENSDARG00000091728 68 0.862 - - - - - - 0.862 - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
41. si:dkey-117m1.4 ENSDARG00000093120 1666 0.862 - - - - - - 0.862 - - si:dkey-117m1.4 [Source:ZFIN;Acc:ZDB-GENE-090313-177]
42. hspa12a ENSDARG00000070603 1474 0.86 - - - - - - 0.860 - - heat shock protein 12A [Source:ZFIN;Acc:ZDB-GENE-031001-1]
43. CABZ01079241.1 ENSDARG00000098424 88 0.86 - - - - - - 0.860 - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
44. kcnh7 ENSDARG00000062687 172 0.86 - - - - - - 0.860 - - potassium channel, voltage gated eag related subfamily H, member 7 [Source:ZFIN;Acc:ZDB-GENE-120214-39]
45. CABZ01112521.1 CABZ01112521.1 83 0.859 - - - - - - 0.859 - -
46. rpp21 ENSDARG00000043404, ENSDARG00000109965 469 0.858 0.858 - - - - - - - - ribonuclease P 21 subunit [Source:ZFIN;Acc:ZDB-GENE-040801-37]
47. PARP4 ENSDARG00000069934 70 0.858 - - - - - - 0.858 - - poly (ADP-ribose) polymerase family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-387]
48. CABZ01022575.2 CABZ01022575.2 83 0.858 - - - - - - 0.858 - -
49. rbm38 ENSDARG00000058818 647 0.856 - - - - - - 0.856 - - RNA binding motif protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-5923]
50. agmo ENSDARG00000025595 42 0.856 - - - - - - 0.856 - - alkylglycerol monooxygenase [Source:ZFIN;Acc:ZDB-GENE-040426-2207]
51. exosc8 ENSDARG00000068755 951 0.856 - - - - - - 0.856 - - exosome component 8 [Source:ZFIN;Acc:ZDB-GENE-030131-1736]
52. ZBTB8A ENSDARG00000059226 98 0.856 - - - - - - 0.856 - - zinc finger and BTB domain containing 8A [Source:ZFIN;Acc:ZDB-GENE-060421-5153]
53. si:ch211-218c6.9 si:ch211-218c6.9 40 0.855 - - - - - - 0.855 - -
54. cyp27a1.4 ENSDARG00000055159 47 0.855 - - - - - - 0.855 - - cytochrome P450, family 27, subfamily A, polypeptide 1, gene 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1060]
55. pigm ENSDARG00000024277 86 0.855 - - - - - - 0.855 - - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
56. si:ch73-186j5.4 si:ch73-186j5.4 70 0.855 - - - - - - 0.855 - -
57. aldh2.2 ENSDARG00000028087 303 0.855 - 0.855 - - - - - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
58. CASK CASK 1750 0.855 - - - - - - 0.855 - -
59. PRRT4 ENSDARG00000088343 36 0.855 - - - - - - 0.855 - - proline-rich transmembrane protein 4 [Source:ZFIN;Acc:ZDB-GENE-140106-210]
60. fosb ENSDARG00000055751 170 0.854 - - - - - - 0.854 - - FBJ murine osteosarcoma viral oncogene homolog B [Source:ZFIN;Acc:ZDB-GENE-041114-181]
61. slc5a11 ENSDARG00000019932 160 0.853 - - - - - - 0.853 - - solute carrier family 5 (sodium/inositol cotransporter), member 11 [Source:ZFIN;Acc:ZDB-GENE-041114-9]
62. olfml2bb ENSDARG00000021480 256 0.853 - - - - - - 0.853 - - olfactomedin-like 2Bb [Source:ZFIN;Acc:ZDB-GENE-070912-266]
63. si:ch211-153l6.4 si:ch211-153l6.4 45 0.853 - - - - - - 0.853 - -
64. si:dkey-169i5.4 ENSDARG00000077862 511 0.853 - - - - - - 0.853 - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
65. KLHL7 ENSDARG00000101445 684 0.852 - - - - - - 0.852 - - kelch-like family member 7 [Source:ZFIN;Acc:ZDB-GENE-130212-1]
66. kat2b ENSDARG00000062634 276 0.85 - - - - - - 0.850 - - K(lysine) acetyltransferase 2B [Source:ZFIN;Acc:ZDB-GENE-060503-207]
67. OLFM4_1 OLFM4_1 213 0.849 - - - - - - 0.849 - -
68. eno1b ENSDARG00000013750 63 0.849 - - - - - - 0.849 - - enolase 1b, (alpha) [Source:ZFIN;Acc:ZDB-GENE-040426-1651]
69. cnot10 ENSDARG00000058528 478 0.847 - - - - - - 0.847 - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
70. cbln2a ENSDARG00000074601 12 0.847 - - - - - - 0.847 - - cerebellin 2a precursor [Source:ZFIN;Acc:ZDB-GENE-070912-591]
71. CCDC34 CCDC34 313 0.846 - - - - - - 0.846 - -
72. rgs3a ENSDARG00000099746 727 0.846 - - - - - - 0.846 - - regulator of G protein signaling 3a [Source:ZFIN;Acc:ZDB-GENE-040801-150]
73. SHARPIN ENSDARG00000076995 235 0.846 0.846 - - - - - - - - SHANK-associated RH domain interacting protein [Source:ZFIN;Acc:ZDB-GENE-101223-1]
74. gfm2 ENSDARG00000005561 302 0.846 - - - - - - 0.846 - - G elongation factor, mitochondrial 2 [Source:ZFIN;Acc:ZDB-GENE-060201-3]
75. mapk4 ENSDARG00000017681, ENSDARG00000110581 303 0.846 - - - - - - 0.846 - - mitogen-activated protein kinase 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2835]
76. ints3 ENSDARG00000016811 339 0.845 - - - - - - 0.845 - - integrator complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-060503-634]
77. trim47 ENSDARG00000056678 641 0.845 - - - 0.845 - - - - - tripartite motif containing 47 [Source:ZFIN;Acc:ZDB-GENE-040426-1000]
78. CDH8 172 0.844 - - - - - - 0.844 - - cadherin 8
79. si:dkey-103i16.6 ENSDARG00000062893, ENSDARG00000116729 108 0.844 - 0.844 - - - - - - - si:dkey-103i16.6 [Source:ZFIN;Acc:ZDB-GENE-061207-46]
80. mir184 48 0.844 - - - - - - 0.844 - - microRNA 184
81. si:ch211-148l7.4 ENSDARG00000094469 221 0.844 - - - - - - 0.844 - - si:ch211-148l7.4 [Source:ZFIN;Acc:ZDB-GENE-090313-38]
82. mettl16 ENSDARG00000055838 818 0.844 - - - - - - 0.844 - - methyltransferase like 16 [Source:ZFIN;Acc:ZDB-GENE-040801-130]
83. hs3st3l ENSDARG00000059903 184 0.842 - - - - - - 0.842 - - heparan sulfate (glucosamine) 3-O-sulfotransferase 3-like [Source:ZFIN;Acc:ZDB-GENE-070202-6]
84. kcnk5a ENSDARG00000023587, ENSDARG00000111204 128 0.842 - - - - - - 0.842 - - potassium channel, subfamily K, member 5a [Source:ZFIN;Acc:ZDB-GENE-051113-112]
85. kcnj1a.1 ENSDARG00000091232 110 0.842 - 0.842 - - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
86. ptgis ENSDARG00000060094, ENSDARG00000113227 82 0.841 - - - - - - 0.841 - - prostaglandin I2 (prostacyclin) synthase [Source:ZFIN;Acc:ZDB-GENE-070116-1]
87. RPS6KC1 ENSDARG00000104103 746 0.841 - - - - - 0.841 - - - ribosomal protein S6 kinase polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-081031-83]
88. rcc1 ENSDARG00000037158 1165 0.84 - - - - - - 0.840 - - regulator of chromosome condensation 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2216]
89. DHRS7C DHRS7C 363 0.84 - 0.840 - - - - - - -
90. scml4 ENSDARG00000017266 194 0.84 - - - - - - 0.840 - - Scm polycomb group protein like 4 [Source:ZFIN;Acc:ZDB-GENE-041210-338]
91. BX936303.1 ENSDARG00000103105 26 0.839 - - - - - - 0.839 - -
92. sirt3 ENSDARG00000035819 101 0.839 - - - - - - 0.839 - - sirtuin 3 [Source:ZFIN;Acc:ZDB-GENE-070112-1762]
93. zbtb14 ENSDARG00000098273 36 0.839 - - - - - - 0.839 - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
94. zgc:173570 ENSDARG00000037645, ENSDARG00000114242 46 0.838 - - - - - - 0.838 - - zgc:173570 [Source:ZFIN;Acc:ZDB-GENE-080218-15]
95. adam28 ENSDARG00000035514, ENSDARG00000109685, ENSDARG00000111244 540 0.837 - - - - - - 0.837 - - ADAM metallopeptidase domain 28 [Source:ZFIN;Acc:ZDB-GENE-060929-532]
96. vps36 ENSDARG00000057021 636 0.837 - - - 0.837 - - - - - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
97. gabra1 ENSDARG00000068989 581 0.837 - - - - - - 0.837 - - gamma-aminobutyric acid (GABA) A receptor, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-061013-194]
98. CU570684.5 CU570684.5 55 0.837 - - - - - - 0.837 - -
99. scn3b ENSDARG00000062359 242 0.837 - - - - - - 0.837 - - sodium channel, voltage-gated, type III, beta [Source:ZFIN;Acc:ZDB-GENE-070920-2]
100. dgat1b ENSDARG00000054914 119 0.836 - - - - - - 0.836 - - diacylglycerol O-acyltransferase 1b [Source:ZFIN;Acc:ZDB-GENE-040718-158]

There are 506 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA