Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-89o9.4

Gene Name Gene ID Reads Annotation
si:ch211-89o9.4 ENSDARG00000093237 153 si:ch211-89o9.4 [Source:ZFIN;Acc:ZDB-GENE-090313-134]










Genes with expression patterns similar to si:ch211-89o9.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-89o9.4 ENSDARG00000093237 153 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-89o9.4 [Source:ZFIN;Acc:ZDB-GENE-090313-134]
2. sms ENSDARG00000008155 1192 1.621 - 0.704 - - - - 0.917 - - spermine synthase [Source:ZFIN;Acc:ZDB-GENE-040625-150]
3. lnpb 781 1.591 - - - - - 0.849 0.742 - - limb and neural patterns b, transcript variant X3
4. myoz2a ENSDARG00000012311 1373 1.575 - 0.779 - - - - 0.796 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
5. alpk3a ENSDARG00000078989 1992 1.572 - - - - - 0.759 0.813 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
6. rtn2b ENSDARG00000057027 1391 1.567 - - - - - 0.736 0.831 - - reticulon 2b [Source:ZFIN;Acc:ZDB-GENE-060331-95]
7. six1b ENSDARG00000026473 1908 1.554 - 0.809 - - - - 0.745 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
8. MYOT ENSDARG00000076312 1791 1.55 - 0.744 - - - 0.806 - - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
9. smyd1a ENSDARG00000009280 1503 1.544 - - - - - 0.735 0.809 - - SET and MYND domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9825]
10. PAQR4 PAQR4 2150 1.543 - 0.806 - - - - 0.737 - -
11. FBXO40 FBXO40 194 1.54 - - - - - - 0.817 0.723 -
12. BX470254.1 ENSDARG00000097402 1389 1.538 - 0.740 - - - - 0.798 - -
13. mkxa ENSDARG00000075450, ENSDARG00000114299 233 1.536 - 0.813 - - - - 0.723 - - mohawk homeobox a [Source:ZFIN;Acc:ZDB-GENE-080513-1]
14. sec22bb_1 ENSDARG00000100435 57 1.53 - 0.780 - - - - 0.750 - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
15. MSS51 ENSDARG00000075463 428 1.525 - 0.707 - - - - 0.818 - - MSS51 mitochondrial translational activator [Source:ZFIN;Acc:ZDB-GENE-130530-775]
16. CABZ01086825.1 CABZ01086825.1 573 1.524 - - - - - 0.714 0.810 - -
17. grem2 grem2 743 1.521 - 0.754 - - - 0.767 - - -
18. pvalb4 ENSDARG00000024433 35736 1.517 - - - - - - 0.810 0.707 - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
19. ugp2a ENSDARG00000005578 2835 1.511 - - - - - 0.701 0.810 - - UDP-glucose pyrophosphorylase 2a [Source:ZFIN;Acc:ZDB-GENE-090311-46]
20. YRDC ENSDARG00000041428 221 1.508 - 0.744 - - - - 0.764 - - yrdC N(6)-threonylcarbamoyltransferase domain containing [Source:ZFIN;Acc:ZDB-GENE-070410-65]
21. myf6 ENSDARG00000029830 1911 1.501 - 0.784 - - - - 0.717 - - myogenic factor 6 [Source:ZFIN;Acc:ZDB-GENE-040309-2]
22. usp28 ENSDARG00000008880 1850 1.5 - 0.702 - - - - 0.798 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
23. acyp1 ENSDARG00000060126 2161 1.498 - 0.746 - - - 0.752 - - - acylphosphatase 1, erythrocyte (common) type [Source:ZFIN;Acc:ZDB-GENE-050309-125]
24. dachb ENSDARG00000034785, ENSDARG00000111845 109 1.494 - 0.769 - - - - 0.725 - - dachshund b [Source:ZFIN;Acc:ZDB-GENE-020402-4]
25. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.491 - 0.725 - - - - 0.766 - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
26. mylk2 ENSDARG00000031698 135 1.491 - 0.714 - - - - 0.777 - - myosin light chain kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080616-2]
27. sept8b ENSDARG00000014233 223 1.485 - - - - - 0.721 0.764 - - septin 8b [Source:ZFIN;Acc:ZDB-GENE-070424-3]
28. CABZ01044297.1 CABZ01044297.1 2015 1.474 - 0.731 - - - - 0.743 - -
29. ryr1b ENSDARG00000023797 5693 1.463 - 0.753 - - - - 0.710 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
30. TIMM21 ENSDARG00000071594 722 1.461 - - - - - 0.755 0.706 - - translocase of inner mitochondrial membrane 21 [Source:HGNC Symbol;Acc:HGNC:25010]
31. cbwd ENSDARG00000004318, ENSDARG00000111371 626 1.459 - 0.713 - - - 0.746 - - - COBW domain containing [Source:ZFIN;Acc:ZDB-GENE-040426-2388]
32. col11a2 ENSDARG00000012422 3204 1.458 - 0.740 - - - - 0.718 - - collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
33. cacng1 cacng1 3118 1.458 - 0.713 - - - - 0.745 - -
34. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 1.456 - - - - - 0.721 0.735 - - poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
35. MYOM3 2720 1.452 - 0.719 - - - - 0.733 - - myomesin 3, transcript variant X2
36. pitx3 ENSDARG00000070069 363 1.439 - 0.702 - - - - 0.737 - - paired-like homeodomain 3 [Source:ZFIN;Acc:ZDB-GENE-041229-4]
37. eng1a eng1a 484 1.434 - - - - - 0.700 0.734 - -
38. ASXL2 ENSDARG00000076501 378 0.945 - 0.945 - - - - - - - ASXL transcriptional regulator 2 [Source:ZFIN;Acc:ZDB-GENE-100412-1]
39. si:dkey-240h12.4 ENSDARG00000034210 114 0.914 0.914 - - - - - - - - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
40. CABZ01085858.1 CABZ01085858.1 355 0.899 0.899 - - - - - - - -
41. si:dkey-65j6.2 ENSDARG00000103586 533 0.893 - - - - - - 0.893 - - si:dkey-65j6.2 [Source:ZFIN;Acc:ZDB-GENE-090313-319]
42. DNLZ ENSDARG00000068655 229 0.887 - 0.887 - - - - - - - DNL-type zinc finger [Source:ZFIN;Acc:ZDB-GENE-070112-1482]
43. C5H12orf65 C5H12orf65 237 0.886 - 0.886 - - - - - - -
44. brf2 ENSDARG00000002060 81 0.883 0.883 - - - - - - - - BRF2, RNA polymerase III transcription initiation factor [Source:ZFIN;Acc:ZDB-GENE-040801-43]
45. reep1 ENSDARG00000014854 915 0.877 - - - - - - 0.877 - - receptor accessory protein 1 [Source:ZFIN;Acc:ZDB-GENE-110411-267]
46. C5H4orf22 C5H4orf22 117 0.86 - - - - - 0.860 - - -
47. CU457815.1 ENSDARG00000115823 1005 0.859 - 0.859 - - - - - - - ankyrin repeat and SOCS box containing 15a [Source:NCBI gene;Acc:100151067]
48. mkln1 ENSDARG00000025576 1122 0.859 - 0.859 - - - - - - - muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
49. BX927282.2 ENSDARG00000096925 221 0.857 - 0.857 - - - - - - -
50. SHISA8 SHISA8 58 0.855 - - - - - - 0.855 - -
51. arhgap4a ENSDARG00000039265 181 0.855 0.855 - - - - - - - - Rho GTPase activating protein 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1229]
52. lingo4b ENSDARG00000078527 235 0.851 - - - - - - 0.851 - - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
53. tsga10 ENSDARG00000052512 79 0.85 - 0.850 - - - - - - - testis specific, 10 [Source:ZFIN;Acc:ZDB-GENE-061013-482]
54. orai2 ENSDARG00000035148 330 0.85 - - - - - - 0.850 - - ORAI calcium release-activated calcium modulator 2 [Source:ZFIN;Acc:ZDB-GENE-060531-127]
55. hspb7 ENSDARG00000104441 1417 0.848 - - - - - - 0.848 - - heat shock protein family, member 7 (cardiovascular) [Source:ZFIN;Acc:ZDB-GENE-041010-136]
56. eral1 ENSDARG00000059887 149 0.848 - 0.848 - - - - - - - Era-like 12S mitochondrial rRNA chaperone 1 [Source:ZFIN;Acc:ZDB-GENE-060526-84]
57. actn2 actn2 1054 0.848 - - - - - - 0.848 - -
58. git2a ENSDARG00000061915 884 0.847 - 0.847 - - - - - - - G protein-coupled receptor kinase interacting ArfGAP 2a [Source:ZFIN;Acc:ZDB-GENE-060526-267]
59. dnajc27 ENSDARG00000070916 530 0.847 - 0.847 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 27 [Source:ZFIN;Acc:ZDB-GENE-081022-93]
60. si:dkeyp-87e3.1 si:dkeyp-87e3.1 245 0.846 - - - - - - 0.846 - -
61. dgkh ENSDARG00000018716 795 0.846 - 0.846 - - - - - - - diacylglycerol kinase, eta [Source:ZFIN;Acc:ZDB-GENE-070912-328]
62. si:ch211-28p3.4 ENSDARG00000091009 280 0.843 - 0.843 - - - - - - - si:ch211-28p3.4 [Source:ZFIN;Acc:ZDB-GENE-130603-54]
63. ZXDC ZXDC 93 0.841 - 0.841 - - - - - - -
64. hemk1 ENSDARG00000078894 397 0.839 - - - - - 0.839 - - - HemK methyltransferase family member 1 [Source:ZFIN;Acc:ZDB-GENE-050208-185]
65. chrnd ENSDARG00000019342 2728 0.837 - - - - - - 0.837 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
66. wdr83 ENSDARG00000041600, ENSDARG00000115089 253 0.836 - - - - - 0.836 - - - WD repeat domain containing 83 [Source:ZFIN;Acc:ZDB-GENE-040718-126]
67. add3b ENSDARG00000056250, ENSDARG00000114699 119 0.836 0.836 - - - - - - - - adducin 3 (gamma) b [Source:ZFIN;Acc:ZDB-GENE-080718-6]
68. tnnc1b ENSDARG00000037539 13945 0.836 - - - - - - 0.836 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
69. si:dkey-225f23.4 ENSDARG00000102520 86 0.836 0.836 - - - - - - - - si:dkey-225f23.4 [Source:NCBI gene;Acc:100005326]
70. cand2 ENSDARG00000005749, ENSDARG00000109268, ENSDARG00000112192 356 0.836 - - - - - - 0.836 - - cullin-associated and neddylation-dissociated 2 (putative) [Source:ZFIN;Acc:ZDB-GENE-060503-645]
71. lrrc20 ENSDARG00000105018 1970 0.833 - 0.833 - - - - - - - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
72. mrps22 ENSDARG00000018073, ENSDARG00000115927 177 0.831 - 0.831 - - - - - - - mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]
73. CT583709.2 CT583709.2 55 0.831 - - - - - - 0.831 - -
74. zgc:92113 1738 0.83 - - - - - - 0.830 - - zgc:92113
75. ypel2b ENSDARG00000087258, ENSDARG00000116766 539 0.829 - 0.829 - - - - - - - yippee-like 2b [Source:ZFIN;Acc:ZDB-GENE-110419-2]
76. fam173b ENSDARG00000033451 513 0.828 - - - - - - 0.828 - - family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
77. gpr78 gpr78 135 0.828 - 0.828 - - - - - - -
78. DHDH DHDH 15 0.827 0.827 - - - - - - - -
79. si:dkey-188i13.10 ENSDARG00000075151 22 0.826 - - - - - 0.826 - - - si:dkey-188i13.10 [Source:ZFIN;Acc:ZDB-GENE-090313-208]
80. ppfibp2a ENSDARG00000061977 199 0.825 - 0.825 - - - - - - - PTPRF interacting protein, binding protein 2a (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-070705-277]
81. vgll2b ENSDARG00000053773 444 0.825 - - - - - - 0.825 - - vestigial-like family member 2b [Source:ZFIN;Acc:ZDB-GENE-050809-113]
82. tnnt2d ENSDARG00000002988 7590 0.825 - - - - - - 0.825 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
83. FRMD5 ENSDARG00000075942 569 0.824 - 0.824 - - - - - - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
84. tamm41 ENSDARG00000100157 1116 0.824 - - - - - - 0.824 - - TAM41 mitochondrial translocator assembly and maintenance homolog [Source:ZFIN;Acc:ZDB-GENE-051030-99]
85. lgals2a ENSDARG00000054942 888 0.823 - - - - - - 0.823 - - lectin, galactoside-binding, soluble, 2a [Source:ZFIN;Acc:ZDB-GENE-050318-2]
86. slc8a3 ENSDARG00000004931 338 0.82 - 0.820 - - - - - - - solute carrier family 8 (sodium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-050810-1]
87. prex1 ENSDARG00000075793 1017 0.82 - 0.820 - - - - - - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1428]
88. zgc:153662 zgc:153662 4604 0.819 - - - - - - 0.819 - -
89. slc25a27 ENSDARG00000042873 297 0.819 - - - - - - 0.819 - - solute carrier family 25, member 27 [Source:ZFIN;Acc:ZDB-GENE-040426-1290]
90. NUDT8 ENSDARG00000007722 329 0.817 - - - - - - 0.817 - - nudix (nucleoside diphosphate linked moiety X)-type motif 8 [Source:ZFIN;Acc:ZDB-GENE-061013-219]
91. ATP5J_2 ATP5J_2 2381 0.817 - - - - - - 0.817 - -
92. CU638714.1 ENSDARG00000100303 2132 0.817 - - - - - - 0.817 - -
93. slc30a4 ENSDARG00000007180 158 0.817 - 0.817 - - - - - - - solute carrier family 30 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1408]
94. si:ch73-59c19.1 ENSDARG00000091909 64 0.815 - - - - - 0.815 - - - si:ch73-59c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-247]
95. ddr2a ENSDARG00000100693 236 0.815 - 0.815 - - - - - - - discoidin domain receptor tyrosine kinase 2a [Source:ZFIN;Acc:ZDB-GENE-090316-2]
96. dnajc24 ENSDARG00000023927 127 0.814 0.814 - - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 24 [Source:ZFIN;Acc:ZDB-GENE-040426-1153]
97. cxcl12a ENSDARG00000037116 5433 0.813 - - - - - - 0.813 - - chemokine (C-X-C motif) ligand 12a (stromal cell-derived factor 1) [Source:ZFIN;Acc:ZDB-GENE-030318-1]
98. txnipb ENSDARG00000070000 2365 0.813 - - - - - - 0.813 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
99. CR855306.1 ENSDARG00000099475 102 0.81 - 0.810 - - - - - - -
100. mirlet7i 192 0.81 - 0.810 - - - - - - - microRNA let-7i

There are 491 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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