Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-89o5.3

Gene Name Gene ID Reads Annotation
si:ch211-89o5.3 si:ch211-89o5.3 5










Genes with expression patterns similar to si:ch211-89o5.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-89o5.3 si:ch211-89o5.3 5 4 - 1.000 1.000 1.000 - - - - 1.000
2. GGT5 GGT5 1 2 - - - 1.000 - - - - 1.000
3. ptger2a ENSDARG00000011434 6 2 - - - 1.000 - - - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
4. SSTR2 SSTR2 12 1.984 - 0.984 - - - - - - 1.000
5. ubb ENSDARG00000093313, ENSDARG00000112953 4 1.923 - 0.923 - - - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
6. zgc:114046 ENSDARG00000091728 68 1.883 - 1.000 0.883 - - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
7. si:ch211-234c11.3_1 ENSDARG00000093615 10 1.807 - - - 0.807 - - - - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
8. ACAP2 ENSDARG00000060783 9 1.797 - - 0.797 1.000 - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-050208-640]
9. npvf ENSDARG00000036227 23 1.712 - - - 0.827 - - - - 0.885 neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
10. nkx2.1b nkx2.1b 125 1.444 - - - 0.724 - - - - 0.720
11. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
12. NPM2 NPM2 41 1 - - - - - - - - 1.000
13. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - - - - 1.000
14. CABZ01081747.2 CABZ01081747.2 9 1 - - - - - - - - 1.000
15. BX004873.4 BX004873.4 0 1 - - - - - - - - 1.000
16. vcam1a ENSDARG00000078201 1 1 - - - - - - - - 1.000 vascular cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-172]
17. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - - - - - - - 1.000 si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
18. gba ENSDARG00000076058 1 1 - - - - - - - - 1.000 glucosidase, beta, acid [Source:ZFIN;Acc:ZDB-GENE-100922-270]
19. wisp2 ENSDARG00000077882 3 1 - - - - - - - - 1.000 WNT1 inducible signaling pathway protein 2 [Source:ZFIN;Acc:ZDB-GENE-060223-1]
20. ccdc24 ENSDARG00000038793 7 1 - - - - - - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
21. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - - - - - - - 1.000
22. zgc:162724 zgc:162724 9 1 - - - - - - - - 1.000
23. si:ch211-149k23.10 si:ch211-149k23.10 10 1 - - - 1.000 - - - - -
24. DSEL DSEL 1 1 - - - - - - - - 1.000
25. zgc:113886 ENSDARG00000077712, ENSDARG00000100587, ENSDARG00000108812 19 1 - - - 1.000 - - - - - zgc:113886 [Source:ZFIN;Acc:ZDB-GENE-050913-91]
26. TDRD6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
27. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
28. si:ch1073-351l9.1 si:ch1073-351l9.1 1 1 - - - - - - - - 1.000
29. si:ch211-170d8.5 ENSDARG00000046142 0 1 - - - - - - - - 1.000 si:ch211-170d8.5 [Source:ZFIN;Acc:ZDB-GENE-081105-120]
30. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - - - - 1.000 si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
31. mybpc2a ENSDARG00000030157 11 1 - - - - - - - - 1.000 myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
32. grin2cb ENSDARG00000077560 9 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, N-methyl D-aspartate 2Cb [Source:ZFIN;Acc:ZDB-GENE-100308-2]
33. CCDC66 2 1 - - - - - - - - 1.000 coiled-coil domain containing 66
34. TAAR1 TAAR1 0 1 - - - - - - - - 1.000
35. tusc3 ENSDARG00000078854 4 1 - - - - - - - - 1.000 tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
36. CT030048.2 CT030048.2 3 1 - - - - - - - - 1.000
37. ZNF341 ENSDARG00000103725 6 1 - - - 1.000 - - - - - zinc finger protein 341 [Source:ZFIN;Acc:ZDB-GENE-080204-99]
38. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
39. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
40. CR394568.1 CR394568.1 0 1 - - - - - - - - 1.000
41. cyp2aa7 ENSDARG00000103766 8 1 - - - 1.000 - - - - - cytochrome P450, family 2, subfamily AA, polypeptide 7 [Source:ZFIN;Acc:ZDB-GENE-071004-48]
42. Metazoa_SRP Metazoa_SRP 1 1 - - - - - - - - 1.000
43. esr1 ENSDARG00000004111, ENSDARG00000112357 19 1 - - - 1.000 - - - - - estrogen receptor 1 [Source:ZFIN;Acc:ZDB-GENE-020806-5]
44. TFR2 ENSDARG00000103727 1 1 - - - 1.000 - - - - - transferrin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041220-3]
45. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - - - - 1.000 si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
46. HMGXB3 ENSDARG00000077823 2 1 - - - - - - - - 1.000 HMG box domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-111012-1]
47. si:ch73-177h5.2 ENSDARG00000020812 0 1 - - - - - - - - 1.000 si:ch73-177h5.2 [Source:ZFIN;Acc:ZDB-GENE-081104-247]
48. FIG4 ENSDARG00000107912 0 1 - - - - - - - - 1.000 FIG4 phosphoinositide 5-phosphatase [Source:HGNC Symbol;Acc:HGNC:16873]
49. 5S_rRNA_1 5S_rRNA_1 5 1 - - - 1.000 - - - - -
50. si:ch211-113a14.19_5 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 2 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
51. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - - - 1.000
52. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
53. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - - - - - - - - 1.000
54. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
55. kcng3 ENSDARG00000061622 6 1 - - - 1.000 - - - - - potassium voltage-gated channel, subfamily G, member 3 [Source:ZFIN;Acc:ZDB-GENE-111111-9]
56. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - - - - 1.000 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
57. si:dkey-83m22.8 si:dkey-83m22.8 1 1 - - - 1.000 - - - - -
58. MEI1 MEI1 2 1 - - - - - - - - 1.000
59. BX321870.1 ENSDARG00000098519 9 1 - - - - - - - - 1.000
60. GPT GPT 2 1 - - - - - - - - 1.000
61. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1 - 1.000 - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
62. CDR2_1 CDR2_1 8 1 - - - - - - - - 1.000
63. slc47a2 2 1 - - - - - - - - 1.000 solute carrier family 47 (multidrug and toxin extrusion), member 2
64. PDE6H 3 1 - - - - - - - - 1.000 phosphodiesterase 6H, cGMP-specific, cone, gamma, transcript variant 2
65. dock4b ENSDARG00000024874 32 1 - - - 1.000 - - - - - dedicator of cytokinesis 4b [Source:ZFIN;Acc:ZDB-GENE-060130-74]
66. si:ch211-64c10.1 si:ch211-64c10.1 21 1 - - - 1.000 - - - - -
67. si:dkeyp-51f11.3 si:dkeyp-51f11.3 0 1 - - - - - - - - 1.000
68. si:dkey-34f9.2 si:dkey-34f9.2 0 1 - - - - - - - - 1.000
69. iqsec2 iqsec2 304 1 - 1.000 - - - - - - -
70. si:ch1073-39g8.1 si:ch1073-39g8.1 7 1 - - - 1.000 - - - - -
71. CDK18 ENSDARG00000012204 5 1 - - - - - - - - 1.000 cyclin dependent kinase 18 [Source:HGNC Symbol;Acc:HGNC:8751]
72. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
73. TSTA3_1 TSTA3_1 0 1 - - - 1.000 - - - - -
74. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
75. CR356223.1 ENSDARG00000093865 1 1 - - - - - - - - 1.000
76. hhat ENSDARG00000074428 8 1 - - - - - - - - 1.000 hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
77. si:dkey-82i20.3 si:dkey-82i20.3 6 1 - - - - - - - - 1.000
78. si:ch211-113a14.19_1 ENSDARG00000109926, ENSDARG00000111536, ENSDARG00000113481, ENSDARG00000113707, ENSDARG00000115875 15 1 - - - - - - - - 1.000 si:ch211-113a14.19 [Source:ZFIN;Acc:ZDB-GENE-121214-198]
79. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
80. zgc:66313 ENSDARG00000030357 45 1 - - - 1.000 - - - - - zgc:66313 [Source:ZFIN;Acc:ZDB-GENE-040426-1606]
81. si:ch211-145m1.3 3 1 - - - - - - - - 1.000 si:ch211-145m1.3
82. si:ch73-341k19.1 ENSDARG00000095946 5 1 - - - - - - - - 1.000 si:ch73-341k19.1 [Source:ZFIN;Acc:ZDB-GENE-110411-201]
83. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
84. si:dkey-25o1.6 si:dkey-25o1.6 5 1 - - - - - - - - 1.000
85. si:dkey-111i23.1 ENSDARG00000094811 1 1 - - - 1.000 - - - - - si:dkey-111i23.1 [Source:ZFIN;Acc:ZDB-GENE-070912-351]
86. CNBD1 ENSDARG00000091489 0 1 - - - - - - - - 1.000 cyclic nucleotide binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1022]
87. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
88. 5S_rRNA_6 5S_rRNA_6 11 1 - - - 1.000 - - - - -
89. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
90. lifra ENSDARG00000098857 11 1 - - - - - - - - 1.000 leukemia inhibitory factor receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-050327-16]
91. calhm1 ENSDARG00000077021 2 1 - - - 1.000 - - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
92. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
93. si:ch211-233m11.1 ENSDARG00000074653 1 1 - - - - - - - - 1.000 si:ch211-233m11.1 [Source:ZFIN;Acc:ZDB-GENE-081028-16]
94. dcp2_1 ENSDARG00000104242 74 1 - - - - - - - - 1.000 decapping mRNA 2 [Source:ZFIN;Acc:ZDB-GENE-040426-851]
95. ptx4 ENSDARG00000038072 2 1 - - - - - - - - 1.000 pentraxin 4, long [Source:ZFIN;Acc:ZDB-GENE-120215-70]
96. BX248582.1 BX248582.1 1 1 - - - 1.000 - - - - -
97. si:ch211-145h19.4 si:ch211-145h19.4 1 1 - - - - - - - - 1.000
98. CCDC18 ENSDARG00000078822 5 1 - - - - - - - - 1.000 coiled-coil domain containing 18 [Source:ZFIN;Acc:ZDB-GENE-030131-5414]
99. mvb12bb ENSDARG00000079478 9 1 - - - - - - - - 1.000 multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
100. ENSDARG00000089152 ENSDARG00000089152 12 1 - - - 1.000 - - - - -

There are 624 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA