Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-89o5.3

Gene Name Gene ID Reads Annotation
si:ch211-89o5.3 si:ch211-89o5.3 5










Genes with expression patterns similar to si:ch211-89o5.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-89o5.3 si:ch211-89o5.3 5 4 - 1.000 1.000 1.000 - - - - 1.000
2. ptger2a ENSDARG00000011434 6 2 - - - 1.000 - - - - 1.000 prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
3. GGT5 GGT5 1 2 - - - 1.000 - - - - 1.000
4. SSTR2 SSTR2 12 1.984 - 0.984 - - - - - - 1.000
5. ubb ENSDARG00000093313, ENSDARG00000112953 4 1.923 - 0.923 - - - - - - 1.000 ubiquitin B [Source:ZFIN;Acc:ZDB-GENE-050411-10]
6. zgc:114046 ENSDARG00000091728 68 1.883 - 1.000 0.883 - - - - - - zgc:114046 [Source:ZFIN;Acc:ZDB-GENE-050320-24]
7. si:ch211-234c11.3_1 ENSDARG00000093615 10 1.807 - - - 0.807 - - - - 1.000 si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
8. ACAP2 ENSDARG00000060783 9 1.797 - - 0.797 1.000 - - - - - ArfGAP with coiled-coil, ankyrin repeat and PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-050208-640]
9. npvf ENSDARG00000036227 23 1.712 - - - 0.827 - - - - 0.885 neuropeptide VF precursor [Source:ZFIN;Acc:ZDB-GENE-070424-226]
10. nkx2.1b nkx2.1b 125 1.444 - - - 0.724 - - - - 0.720
11. si:dkey-266f7.10 ENSDARG00000086613 7 1 - - - 1.000 - - - - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
12. FJX1 ENSDARG00000035873 22 1 - - - - - - - - 1.000 four jointed box 1 [Source:ZFIN;Acc:ZDB-GENE-100422-10]
13. skila ENSDARG00000023933 2 1 - - - - - - - - 1.000 SKI-like proto-oncogene a [Source:ZFIN;Acc:ZDB-GENE-070912-548]
14. si:dkeyp-35e5.10 ENSDARG00000107425 8 1 - - - 1.000 - - - - - si:dkeyp-35e5.10 [Source:ZFIN;Acc:ZDB-GENE-110913-63]
15. 5S_rRNA_6 5S_rRNA_6 11 1 - - - 1.000 - - - - -
16. si:dkey-13k17.1 si:dkey-13k17.1 2 1 - - - 1.000 - - - - -
17. ldlrap1b ENSDARG00000039750 2 1 - - - - - - - - 1.000 low density lipoprotein receptor adaptor protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1012]
18. tcp10 tcp10 1 1 - - - 1.000 - - - - -
19. zgc:113886 ENSDARG00000077712, ENSDARG00000100587, ENSDARG00000108812 19 1 - - - 1.000 - - - - - zgc:113886 [Source:ZFIN;Acc:ZDB-GENE-050913-91]
20. CU467982.1 CU467982.1 12 1 - - - - - - - - 1.000
21. si:dkey-276l13.5 si:dkey-276l13.5 3 1 - - - - - - - - 1.000
22. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - - - - 1.000
23. mfsd9 ENSDARG00000074728 6 1 - - - 1.000 - - - - - major facilitator superfamily domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-070912-190]
24. dock4b ENSDARG00000024874 32 1 - - - 1.000 - - - - - dedicator of cytokinesis 4b [Source:ZFIN;Acc:ZDB-GENE-060130-74]
25. si:dkey-25o1.9 si:dkey-25o1.9 0 1 - - - 1.000 - - - - -
26. LOX LOX 7 1 - - - 1.000 - - - - -
27. GABRA2 ENSDARG00000113737 5 1 - - - - - - - - 1.000 gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
28. slc35c1 ENSDARG00000104669 65 1 - - - - - - - - 1.000 solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
29. rhbdd3 ENSDARG00000079816 2 1 - - - - - - - - 1.000 rhomboid domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-39]
30. si:ch211-215m21.29 si:ch211-215m21.29 5 1 - - - - - - - - 1.000
31. 5S_rRNA_13 5S_rRNA_13 0 1 - - - - - - - - 1.000
32. si:ch211-13k12.1 si:ch211-13k12.1 25 1 - - - - - - - - 1.000
33. CNBD1 ENSDARG00000091489 0 1 - - - - - - - - 1.000 cyclic nucleotide binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-1022]
34. wdr21 ENSDARG00000003197, ENSDARG00000110654 4 1 - - - 1.000 - - - - - WD repeat domain 21 [Source:ZFIN;Acc:ZDB-GENE-040109-2]
35. rspo4 ENSDARG00000038593 3 1 - - - 1.000 - - - - - R-spondin 4 [Source:ZFIN;Acc:ZDB-GENE-110103-2]
36. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 1 - - - - - - - - 1.000 potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
37. si:dkey-11f4.14 ENSDARG00000098461 35 1 - - - 1.000 - - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
38. CU459094.2 ENSDARG00000113503 5 1 - - - 1.000 - - - - - uncharacterized LOC100331538 [Source:NCBI gene;Acc:100331538]
39. slc5a5 ENSDARG00000005392 6 1 - - - - - - - - 1.000 solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
40. GPT GPT 2 1 - - - - - - - - 1.000
41. CR356223.1 ENSDARG00000093865 1 1 - - - - - - - - 1.000
42. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - - - - 1.000 chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
43. DNM2 DNM2 2 1 - - - 1.000 - - - - -
44. Metazoa_SRP Metazoa_SRP 1 1 - - - - - - - - 1.000
45. ZCCHC6 2 1 - - - - - - - - 1.000 zinc finger, CCHC domain containing 6
46. BX004873.4 BX004873.4 0 1 - - - - - - - - 1.000
47. ccdc24 ENSDARG00000038793 7 1 - - - - - - - - 1.000 coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
48. gria3b ENSDARG00000037498, ENSDARG00000111839 2 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, AMPA 3b [Source:ZFIN;Acc:ZDB-GENE-030616-53]
49. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - - - - 1.000
50. si:ch211-149k23.10 si:ch211-149k23.10 10 1 - - - 1.000 - - - - -
51. si:ch73-27e22.3 ENSDARG00000077263 10 1 - - - - - - - - 1.000 si:ch73-27e22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-231]
52. ENSDARG00000089152 ENSDARG00000089152 12 1 - - - 1.000 - - - - -
53. EPM2AIP1 EPM2AIP1 4 1 - - - - - - - - 1.000
54. RBBP6_3 RBBP6_3 34 1 - - - - - - - - 1.000
55. grid2 ENSDARG00000055302, ENSDARG00000110593 1 1 - - - - - - - - 1.000 glutamate receptor, ionotropic, delta 2 [Source:ZFIN;Acc:ZDB-GENE-040913-1]
56. BX511034.1_1 ENSDARG00000071629 0 1 - - - - - - - - 1.000
57. CR774179.1 ENSDARG00000086969 3 1 - - - - - - - - 1.000
58. LPHN2_1 LPHN2_1 3 1 - - - 1.000 - - - - -
59. CEP170B_1 CEP170B_1 3 1 - - - 1.000 - - - - -
60. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - 1.000 - - - - -
61. arhgap21a ENSDARG00000104295 1 1 - - - - - - - - 1.000 Rho GTPase activating protein 21a [Source:ZFIN;Acc:ZDB-GENE-090918-5]
62. si:ch211-171l17.14 ENSDARG00000100412, ENSDARG00000101388 4 1 - - - - - - - - 1.000 si:ch211-171l17.14 [Source:ZFIN;Acc:ZDB-GENE-070912-153]
63. hhat ENSDARG00000074428 8 1 - - - - - - - - 1.000 hedgehog acyltransferase [Source:ZFIN;Acc:ZDB-GENE-051118-1]
64. si:ch211-113a14.26 5 1 - - - 1.000 - - - - - si:ch211-113a14.26
65. BX927130.1 ENSDARG00000099328 7 1 - - - - - - - - 1.000 si:dkey-27n6.5 [Source:NCBI gene;Acc:557869]
66. cdc14aa ENSDARG00000013858 18 1 - - - - - - - - 1.000 cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
67. htr5al htr5al 6 1 - - - - - - - - 1.000
68. si:dkey-24h22.5 ENSDARG00000094556 4 1 - - - 1.000 - - - - - si:dkey-24h22.5 [Source:ZFIN;Acc:ZDB-GENE-090313-274]
69. si:ch1073-109g21.1 si:ch1073-109g21.1 0 1 - - - - - - - - 1.000
70. SLCO2B1 ENSDARG00000054609 0 1 - - - - - - - - 1.000 solute carrier organic anion transporter family, member 2B1 [Source:ZFIN;Acc:ZDB-GENE-051023-6]
71. zgc:92161 ENSDARG00000101749 27 1 - - - - - - - - 1.000 zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
72. FP102016.2 FP102016.2 0 1 - - - - - - - - 1.000
73. MEI1 MEI1 2 1 - - - - - - - - 1.000
74. KIAA0319 KIAA0319 2 1 - - - - - - - - 1.000
75. CT737184.1 ENSDARG00000102726 0 1 - - - - - - - - 1.000
76. TFR2 ENSDARG00000103727 1 1 - - - 1.000 - - - - - transferrin receptor 2 [Source:ZFIN;Acc:ZDB-GENE-041220-3]
77. CABZ01074669.1 CABZ01074669.1 12 1 - - - - - - - - 1.000
78. si:rp71-7l19.6 si:rp71-7l19.6 12 1 - - - - - - - - 1.000
79. BX119910.4 BX119910.4 0 1 - - - - - - - - 1.000
80. si:dkeyp-46h3.8 ENSDARG00000093704 9 1 - - - 1.000 - - - - - si:dkeyp-46h3.8 [Source:ZFIN;Acc:ZDB-GENE-060503-183]
81. CABZ01030692.1 CABZ01030692.1 0 1 - - - - - - - - 1.000
82. cyp2n13 ENSDARG00000042953 10 1 - - - - - - - - 1.000 cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
83. si:dkey-179k24.6 si:dkey-179k24.6 5 1 - - - - - - - - 1.000
84. scn1a 8 1 - - - - - - - - 1.000 sodium channel, voltage-gated, type I, alpha, transcript variant X1
85. CU302316.1 ENSDARG00000109600 2 1 - - - - - - - - 1.000
86. si:dkey-14d8.1 ENSDARG00000095332 11 1 - - - - - - - - 1.000 si:dkey-14d8.1 [Source:ZFIN;Acc:ZDB-GENE-041210-86]
87. CR318624.1 ENSDARG00000094618 5 1 - - - - - - - - 1.000
88. slc15a1b ENSDARG00000044528 6 1 - - - - - - - - 1.000 solute carrier family 15 (oligopeptide transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-4661]
89. si:dkey-149m13.2 si:dkey-149m13.2 1 1 - - - - - - - - 1.000
90. trpc6a ENSDARG00000056625, ENSDARG00000111066 4 1 - - - 1.000 - - - - - transient receptor potential cation channel, subfamily C, member 6a [Source:ZFIN;Acc:ZDB-GENE-040724-114]
91. si:ch211-254p10.2 ENSDARG00000056750 3 1 - - - - - - - - 1.000 si:ch211-254p10.2 [Source:ZFIN;Acc:ZDB-GENE-100922-17]
92. cep78 ENSDARG00000039229 1 1 - - - 1.000 - - - - - centrosomal protein 78 [Source:ZFIN;Acc:ZDB-GENE-070905-1]
93. si:ch211-214p13.7 1 1 - - - - - - - - 1.000 si:ch211-214p13.7
94. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - - - 1.000
95. FP236851.1 FP236851.1 10 1 - - - 1.000 - - - - -
96. iqsec2 iqsec2 304 1 - 1.000 - - - - - - -
97. LIX1 ENSDARG00000052154 9 1 - - - - - - - - 1.000 limb and CNS expressed 1 [Source:ZFIN;Acc:ZDB-GENE-060526-123]
98. si:ch211-198e13.3 5 1 - - - - - - - - 1.000 si:ch211-198e13.3, transcript variant X1
99. vcam1a ENSDARG00000078201 1 1 - - - - - - - - 1.000 vascular cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-060503-172]
100. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - - - - 1.000 solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]

There are 624 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA