Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-89o5.1

Gene Name Gene ID Reads Annotation
si:ch211-89o5.1 si:ch211-89o5.1 91










Genes with expression patterns similar to si:ch211-89o5.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-89o5.1 si:ch211-89o5.1 91 8 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. CR388047.3 ENSDARG00000117023 89 1.961 - 0.963 - - - - - - 0.998
3. casp2 ENSDARG00000062052 559 1.94 - 0.945 - - - - - - 0.995 caspase 2, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-3]
4. CR318593.1_1 CR318593.1_1 8 1.928 - - - - 0.928 1.000 - - -
5. nfu1 ENSDARG00000068125 1743 1.883 - 0.895 - - - - - - 0.988 NFU1 iron-sulfur cluster scaffold homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-365]
6. mov10a ENSDARG00000015829 566 1.84 - 0.859 - - - - - - 0.981 Mov10 RISC complex RNA helicase a [Source:ZFIN;Acc:ZDB-GENE-091230-8]
7. gbp4 ENSDARG00000068857, ENSDARG00000112635 55 1.829 - - 0.829 - - 1.000 - - - guanylate binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-060531-46]
8. ADAP2 ENSDARG00000070565 29 1.808 - - 0.845 - - 0.963 - - - ArfGAP with dual PH domains 2 [Source:ZFIN;Acc:ZDB-GENE-070912-21]
9. zgc:153151 ENSDARG00000069563 126 1.805 - - - - 0.813 - - - 0.992 zgc:153151 [Source:ZFIN;Acc:ZDB-GENE-060825-103]
10. lsr ENSDARG00000099291 881 1.789 - 0.880 - - - - - - 0.909 lipolysis stimulated lipoprotein receptor [Source:ZFIN;Acc:ZDB-GENE-050913-73]
11. grhl3 ENSDARG00000078552 897 1.775 - 0.830 - - - - - - 0.945 grainyhead-like transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9854]
12. IKZF2 ENSDARG00000069111 1366 1.759 - 0.873 - - - - - - 0.886 IKAROS family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-100922-169]
13. rrnad1 ENSDARG00000089033 69 1.753 - - - - 0.872 0.881 - - - ribosomal RNA adenine dimethylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050522-515]
14. afap1 ENSDARG00000055284 730 1.744 - 0.952 - 0.792 - - - - - actin filament associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-100316-6]
15. rangap1a ENSDARG00000041317 1456 1.731 - 0.881 - - - - - - 0.850 RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
16. CYSTM1 CYSTM1 176 1.722 - 0.922 - - 0.800 - - - -
17. stxbp3 ENSDARG00000008142 2604 1.708 - 0.748 - - - - - - 0.960 syntaxin binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2833]
18. timm23 timm23 2712 1.707 - 0.865 - - - - - - 0.842
19. si:ch1073-155h21.1 ENSDARG00000007582 137 1.704 - 0.967 0.737 - - - - - - si:ch1073-155h21.1 [Source:ZFIN;Acc:ZDB-GENE-030131-2664]
20. nrros ENSDARG00000071491, ENSDARG00000112102 64 1.697 - - 0.762 - - 0.935 - - - negative regulator of reactive oxygen species [Source:ZFIN;Acc:ZDB-GENE-040808-36]
21. gba2 ENSDARG00000061472 171 1.688 - - - 0.700 - - - - 0.988 glucosidase, beta (bile acid) 2 [Source:ZFIN;Acc:ZDB-GENE-070522-3]
22. acad11 ENSDARG00000045411 350 1.686 - 0.943 - 0.743 - - - - - acyl-CoA dehydrogenase family, member 11 [Source:ZFIN;Acc:ZDB-GENE-040426-814]
23. zfr2 ENSDARG00000071683 780 1.685 - 0.796 - - - - - - 0.889 zinc finger RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070705-184]
24. GNG12 GNG12 9 1.677 - - - 0.902 - 0.775 - - -
25. f7 ENSDARG00000034862 405 1.667 - 0.937 0.730 - - - - - - coagulation factor VII [Source:ZFIN;Acc:ZDB-GENE-010814-1]
26. prss12 ENSDARG00000061830 593 1.649 - - - - - - 0.703 - 0.946 serine protease 12 [Source:ZFIN;Acc:ZDB-GENE-090313-45]
27. fpr1 ENSDARG00000042984 66 1.648 - - 0.793 0.855 - - - - - formyl peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-121227-2]
28. myb ENSDARG00000053666, ENSDARG00000114024 58 1.645 - - - 0.737 0.908 - - - - v-myb avian myeloblastosis viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-991110-14]
29. cx35.4 ENSDARG00000042866 685 1.632 - - 0.717 - - - - - 0.915 connexin 35.4 [Source:ZFIN;Acc:ZDB-GENE-050417-174]
30. sbno2a ENSDARG00000098801 40 1.619 - - 0.738 0.881 - - - - - strawberry notch homolog 2a [Source:ZFIN;Acc:ZDB-GENE-100629-3]
31. lrtomt lrtomt 39 1.595 - - - 0.753 - 0.842 - - -
32. SLC25A6 ENSDARG00000005853, ENSDARG00000113366 975 1.591 - 0.847 0.744 - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:ZFIN;Acc:ZDB-GENE-070912-446]
33. zgc:136851 zgc:136851 315 1.588 - 0.812 0.776 - - - - - -
34. zgc:114037_4 57 1.586 - - - - - 0.809 0.777 - - zgc:114037
35. ABCC10 ENSDARG00000077988, ENSDARG00000111885, ENSDARG00000113210 81 1.562 - - - 0.720 - 0.842 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 10 [Source:ZFIN;Acc:ZDB-GENE-050517-24]
36. C18H15orf26 C18H15orf26 36 1.551 - - 0.703 0.848 - - - - -
37. man1b1 man1b1 3294 1.55 - 0.768 - - - - - - 0.782
38. ugt2a4 ENSDARG00000051940 85 1.55 - - 0.801 - - 0.749 - - - UDP glucuronosyltransferase 2 family, polypeptide A4 [Source:ZFIN;Acc:ZDB-GENE-080721-23]
39. mettl17 ENSDARG00000103889, ENSDARG00000109400 239 1.545 - - - - - 0.778 0.767 - - methyltransferase like 17 [Source:ZFIN;Acc:ZDB-GENE-031118-203]
40. dlg1l ENSDARG00000102216 1960 1.53 - 0.729 - - - - - - 0.801 discs, large (Drosophila) homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-050222-3]
41. kcnj1a.1 ENSDARG00000091232 110 1.481 - - - - - 0.754 - 0.727 - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
42. klhl26 ENSDARG00000053876 48 1.454 - - 0.737 - - 0.717 - - - kelch-like family member 26 [Source:ZFIN;Acc:ZDB-GENE-030131-5975]
43. exo1 ENSDARG00000056832, ENSDARG00000112534 186 1.43 - - - - 0.709 - 0.721 - - exonuclease 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2828]
44. TKT TKT 298 1.409 - - - - 0.701 0.708 - - -
45. rac1l_1 ENSDARG00000054649, ENSDARG00000096549 12 1 - - - - - 1.000 - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
46. sox8 sox8 109 1 - - - - - 1.000 - - -
47. p4ha3 ENSDARG00000103692 2 1 - - - - - 1.000 - - - prolyl 4-hydroxylase, alpha polypeptide III [Source:ZFIN;Acc:ZDB-GENE-041010-4]
48. zgc:173837 ENSDARG00000076949 24 1 - - - - - 1.000 - - - zgc:173837 [Source:ZFIN;Acc:ZDB-GENE-080213-12]
49. mfsd6l ENSDARG00000014761 60 1 - - - - - 1.000 - - - major facilitator superfamily domain containing 6-like [Source:ZFIN;Acc:ZDB-GENE-040801-105]
50. si:dkey-58f10.14 ENSDARG00000095026 7 1 - - - - - 1.000 - - - si:dkey-58f10.14 [Source:ZFIN;Acc:ZDB-GENE-060526-316]
51. PEG3_35 PEG3_35 52 1 - - - - - 1.000 - - -
52. cers4a ENSDARG00000031387 19 1 - - - - - 1.000 - - - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
53. drc1 ENSDARG00000042182 39 1 - - - - - 1.000 - - - dynein regulatory complex subunit 1 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-041001-218]
54. pabpn1l ENSDARG00000087996, ENSDARG00000113382 40 1 - - - - - 1.000 - - - poly(A) binding protein, nuclear 1-like (cytoplasmic) [Source:ZFIN;Acc:ZDB-GENE-080709-5]
55. asb13a.2 ENSDARG00000045765, ENSDARG00000109879 8 1 - - - - - 1.000 - - - ankyrin repeat and SOCS box containing 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041210-88]
56. CR927050.1 ENSDARG00000099180 5 1 - - - - - 1.000 - - -
57. echdc1 68 1 - - - - - 1.000 - - - enoyl CoA hydratase domain containing 1, transcript variant 1
58. cryba2b ENSDARG00000041925 4329 1 - - - - - 1.000 - - - crystallin, beta A2b [Source:ZFIN;Acc:ZDB-GENE-040718-324]
59. or115-15 ENSDARG00000079294 1 1 - - - - - 1.000 - - - odorant receptor, family F, subfamily 115, member 15 [Source:ZFIN;Acc:ZDB-GENE-990415-189]
60. CU929356.4 CU929356.4 86 1 - - - - - 1.000 - - -
61. mcm5_1 ENSDARG00000019507 10 1 - - - - - 1.000 - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
62. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - - - - - 1.000 - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
63. brwd3 ENSDARG00000035540 92 1 - - - - - 1.000 - - - bromodomain and WD repeat domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-100921-43]
64. rtn4rl2b ENSDARG00000037495 11 1 - - - - - 1.000 - - - reticulon 4 receptor-like 2b [Source:ZFIN;Acc:ZDB-GENE-040310-2]
65. sult3st3 ENSDARG00000042920, ENSDARG00000094089 1 1 - - - - - 1.000 - - - sulfotransferase family 3, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-628]
66. CABZ01063402.1 CABZ01063402.1 64 1 - - - - - - - - 1.000
67. si:dkey-115f9.3 7 1 - - - - - 1.000 - - - si:dkey-115f9.3, transcript variant X2
68. stag1a ENSDARG00000061205 13 1 - - - - - 1.000 - - - stromal antigen 1a [Source:ZFIN;Acc:ZDB-GENE-070912-448]
69. ZC3H8 ZC3H8 114 1 - - - - - 1.000 - - -
70. CU633857.1 ENSDARG00000115315 21 1 - - - - - 1.000 - - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
71. sagb ENSDARG00000038378 28 1 - - - - - 1.000 - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
72. zgc:173705 ENSDARG00000105137, ENSDARG00000114437 83 1 - - - - - 1.000 - - - zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6]
73. snai3 ENSDARG00000031243 31 1 - - - - - 1.000 - - - snail family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-061013-757]
74. EVI5L ENSDARG00000052766 8 1 - - - - - 1.000 - - - ecotropic viral integration site 5 like [Source:HGNC Symbol;Acc:HGNC:30464]
75. DYNLRB2 DYNLRB2 12 1 - - - - - 1.000 - - -
76. RAB38 122 1 - - - - - 1.000 - - - RAB38, member RAS oncogene family
77. fbxw10 ENSDARG00000086484 11 1 - - - - - 1.000 - - - F-box and WD repeat domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-101021-1]
78. dmrt1 ENSDARG00000007349 16 1 - - - - - 1.000 - - - doublesex and mab-3 related transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-050511-1]
79. C12H17orf62_1 C12H17orf62_1 83 1 - - - - - 1.000 - - -
80. zgc:114123 ENSDARG00000044956 9 1 - - - - - 1.000 - - - zgc:114123 [Source:ZFIN;Acc:ZDB-GENE-050913-53]
81. irge4 ENSDARG00000070317 1 1 - - - - - 1.000 - - - immunity-related GTPase family, e4 [Source:ZFIN;Acc:ZDB-GENE-051212-2]
82. ppid_1 ENSDARG00000038835 4 1 - - - - - 1.000 - - - peptidylprolyl isomerase D [Source:ZFIN;Acc:ZDB-GENE-040625-34]
83. fgf23 ENSDARG00000045854 2 1 - - - - - 1.000 - - - fibroblast growth factor 23 [Source:ZFIN;Acc:ZDB-GENE-050201-4]
84. C3H17orf104 C3H17orf104 16 1 - - - - - 1.000 - - -
85. VASP VASP 22 1 - - - - - 1.000 - - -
86. txlng ENSDARG00000001969 7 1 - - - - - 1.000 - - - taxilin gamma [Source:ZFIN;Acc:ZDB-GENE-060616-122]
87. sc:d136 sc:d136 2 1 - - - - - 1.000 - - -
88. BX682234.1 ENSDARG00000074732 5 1 - - - - - 1.000 - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
89. CT030712.1 ENSDARG00000044355 83 1 - - - - - - - - 1.000 uncharacterized LOC100534830 [Source:NCBI gene;Acc:100534830]
90. F2RL3 ENSDARG00000079399 29 1 - - - - - 1.000 - - - F2R like thrombin or trypsin receptor 3 [Source:HGNC Symbol;Acc:HGNC:3540]
91. mov10b.2 ENSDARG00000056065, ENSDARG00000111814 3 1 - - - - - 1.000 - - - Moloney leukemia virus 10b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060526-371]
92. ugt5c1 ENSDARG00000061444 6 1 - - - - - 1.000 - - - UDP glucuronosyltransferase 5 family, polypeptide C1 [Source:ZFIN;Acc:ZDB-GENE-050419-68]
93. si:dkey-21h14.8 ENSDARG00000096083 1 1 - - - - - 1.000 - - - si:dkey-21h14.8 [Source:ZFIN;Acc:ZDB-GENE-110913-34]
94. si:dkey-71b5.2 si:dkey-71b5.2 10 1 - - - - - 1.000 - - -
95. raf1a ENSDARG00000096415, ENSDARG00000102328 2 1 - - - - - 1.000 - - - Raf-1 proto-oncogene, serine/threonine kinase a [Source:ZFIN;Acc:ZDB-GENE-990415-41]
96. slc5a2 ENSDARG00000100919 47 1 - - - - - 1.000 - - - solute carrier family 5 (sodium/glucose cotransporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2498]
97. rbck1 ENSDARG00000031954 95 1 - - - - - 1.000 - - - RanBP-type and C3HC4-type zinc finger containing 1 [Source:ZFIN;Acc:ZDB-GENE-040704-3]
98. fem1a ENSDARG00000067966 11 1 - - - - - 1.000 - - - fem-1 homolog a (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-030131-5824]
99. si:dkey-222f2.6 si:dkey-222f2.6 1 1 - - - - - 1.000 - - -
100. timd4 ENSDARG00000077257 4 1 - - - - - 1.000 - - - T cell immunoglobulin and mucin domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-080303-10]

There are 1402 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA