Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-89f22.1

Gene Name Gene ID Reads Annotation
si:ch211-89f22.1 si:ch211-89f22.1 11










Genes with expression patterns similar to si:ch211-89f22.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-89f22.1 si:ch211-89f22.1 11 7 1.000 1.000 1.000 - 1.000 1.000 - 1.000 1.000
2. NUGGC NUGGC 9 2.979 - 0.979 - - - 1.000 - - 1.000
3. ENKD1 ENSDARG00000043550 44 2.979 - 0.979 1.000 - - 1.000 - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
4. zgc:152891 ENSDARG00000016789 11 2.397 - 0.979 0.702 - - - - - 0.716 zgc:152891 [Source:ZFIN;Acc:ZDB-GENE-061013-229]
5. kcnk15 ENSDARG00000077371 1 2 - - 1.000 - - - - - 1.000 potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
6. rxfp1 ENSDARG00000090071 6 2 - - 1.000 - - 1.000 - - - relaxin family peptide receptor 1 [Source:ZFIN;Acc:ZDB-GENE-110125-1]
7. plp1b ENSDARG00000011929 8 2 - - 1.000 - - - - - 1.000 proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
8. cgna ENSDARG00000055607 11 2 1.000 1.000 - - - - - - - cingulin a [Source:ZFIN;Acc:ZDB-GENE-100921-78]
9. CU638740.4 CU638740.4 1 2 - - - - - 1.000 - - 1.000
10. KSR1_1 KSR1_1 1 2 - - 1.000 - - - - - 1.000
11. CU929036.1 CU929036.1 7 1.979 - 0.979 1.000 - - - - - -
12. gfpt1 ENSDARG00000057465 14 1.979 - 0.979 - - - 1.000 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
13. CR356223.4 CR356223.4 42 1.967 - 0.967 - - - 1.000 - - -
14. SPTBN4 ENSDARG00000092624 6 1.966 - - 1.000 - 0.966 - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
15. klhl5 ENSDARG00000062122, ENSDARG00000114563, ENSDARG00000115909 27 1.95 - - - - 0.950 1.000 - - - kelch-like family member 5 [Source:ZFIN;Acc:ZDB-GENE-080424-7]
16. si:busm1-228j01.5 si:busm1-228j01.5 9 1.945 - 0.979 - - 0.966 - - - -
17. si:ch211-207e7.1 si:ch211-207e7.1 33 1.914 - 0.914 - - - 1.000 - - -
18. U11 U11 11 1.913 - - - - - - - 0.913 1.000
19. CR792453.3 ENSDARG00000110328 5 1.878 - - - - - 1.000 - 0.878 - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
20. DIP2B DIP2B 18 1.872 - - - - - 1.000 - - 0.872
21. SYNPR ENSDARG00000037587 20 1.864 - - 1.000 - - 0.864 - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
22. gnat2 ENSDARG00000042529 112 1.86 - - 1.000 - 0.860 - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
23. NETO2 121 1.825 0.961 - - - - 0.864 - - - neuropilin and tolloid like 2, transcript variant X2
24. CEACAM7 CEACAM7 46 1.795 0.959 0.836 - - - - - - -
25. si:dkeyp-35f12.3 si:dkeyp-35f12.3 3 1.783 - - - - - 1.000 - - 0.783
26. PCDH10 PCDH10 7 1.78 - - - - - 1.000 - - 0.780
27. si:ch211-71k24.5 si:ch211-71k24.5 9 1.772 - - 0.772 - - 1.000 - - -
28. CR339051.1 CR339051.1 9 1.771 - - - - - 1.000 - 0.771 -
29. slco4a1 ENSDARG00000075948 74 1.76 - 0.982 - - - 0.778 - - - solute carrier organic anion transporter family, member 4A1 [Source:ZFIN;Acc:ZDB-GENE-060606-4]
30. l3mbtl3 ENSDARG00000025983 12 1.744 - - - - 0.744 - - - 1.000 l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
31. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1.741 - - - - - 1.000 - 0.741 - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
32. prkacbb ENSDARG00000059125 7 1.715 - - 0.800 - 0.915 - - - - protein kinase, cAMP-dependent, catalytic, beta b [Source:ZFIN;Acc:ZDB-GENE-050904-4]
33. rx3 ENSDARG00000052893 43 1.711 - - - - - 1.000 - - 0.711 retinal homeobox gene 3 [Source:ZFIN;Acc:ZDB-GENE-990415-238]
34. si:dkey-7c18.24 ENSDARG00000041433, ENSDARG00000113434, ENSDARG00000116523 89 1.708 0.887 0.821 - - - - - - - si:dkey-7c18.24 [Source:ZFIN;Acc:ZDB-GENE-041014-63]
35. tlx2 ENSDARG00000011273 870 1.689 - 0.954 - - - 0.735 - - - T cell leukemia homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-020208-1]
36. ano5b ENSDARG00000036147 89 1.685 0.978 0.707 - - - - - - - anoctamin 5b [Source:ZFIN;Acc:ZDB-GENE-061215-108]
37. SLC2A13 SLC2A13 74 1.679 - 0.962 - - - - - 0.717 -
38. si:dkey-103d23.5 26 1.667 - 0.896 - - - 0.771 - - - si:dkey-103d23.5
39. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 1.658 0.821 0.837 - - - - - - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
40. KCNK3 KCNK3 115 1.649 - 0.812 - - - 0.837 - - -
41. si:ch73-382f3.1 ENSDARG00000093833 295 1.627 0.904 0.723 - - - - - - - si:ch73-382f3.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9513]
42. ttll2 ENSDARG00000077853 9 1.626 - 0.897 0.729 - - - - - - tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
43. pcnt ENSDARG00000033012 664 1.591 0.877 0.714 - - - - - - - pericentrin [Source:ZFIN;Acc:ZDB-GENE-030829-26]
44. epb41l3b ENSDARG00000019917 9 1.578 - 0.822 - - - - - - 0.756 erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
45. mxra5a ENSDARG00000074815 628 1.575 0.851 0.724 - - - - - - - matrix-remodelling associated 5a [Source:ZFIN;Acc:ZDB-GENE-090312-22]
46. acot7 ENSDARG00000018653 693 1.574 0.829 0.745 - - - - - - - acyl-CoA thioesterase 7 [Source:ZFIN;Acc:ZDB-GENE-040912-42]
47. fam184a ENSDARG00000014081 93 1.564 - 0.842 - - - 0.722 - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
48. sult2st3 ENSDARG00000028367 79 1.546 - 0.754 - - - - - 0.792 - sulfotransferase family 2, cytosolic sulfotransferase 3 [Source:ZFIN;Acc:ZDB-GENE-061117-4]
49. tmem129 ENSDARG00000075346 109 1.546 0.723 0.823 - - - - - - - transmembrane protein 129, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-2796]
50. osbp2 ENSDARG00000053487 42 1.524 - - - - 0.738 - - 0.786 - oxysterol binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-091113-18]
51. tnfaip3 ENSDARG00000027777 1066 1.509 0.709 0.800 - - - - - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
52. scaf4b ENSDARG00000018854 734 1.5 0.789 0.711 - - - - - - - SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]
53. U6_18 U6_18 12 1.496 - - 0.743 - - - - 0.753 -
54. prg4b ENSDARG00000028163 306 1.491 0.783 0.708 - - - - - - - proteoglycan 4b [Source:ZFIN;Acc:ZDB-GENE-041014-324]
55. pdlim2 ENSDARG00000069956 317 1.445 0.740 0.705 - - - - - - - PDZ and LIM domain 2 (mystique) [Source:ZFIN;Acc:ZDB-GENE-070308-4]
56. gas7a ENSDARG00000074443, ENSDARG00000111294 250 1.405 - - - - - 0.703 - 0.702 - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
57. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
58. prop1 ENSDARG00000039756, ENSDARG00000109950, ENSDARG00000114449 10 1 - - - - - - - - 1.000 PROP paired-like homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081107-40]
59. bbs5 ENSDARG00000039827 211 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
60. hif1al2 ENSDARG00000044550 140 1 - - - - - 1.000 - - - hypoxia inducible factor 1 subunit alpha, like 2 [Source:ZFIN;Acc:ZDB-GENE-050211-2]
61. mdm1 ENSDARG00000045675 64 1 - - - - - 1.000 - - - Mdm1 nuclear protein homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041210-117]
62. syne2a_1 0 1 - - - - - - - - 1.000 spectrin repeat containing, nuclear envelope 2a
63. si:dkeyp-67e1.8 si:dkeyp-67e1.8 6 1 - - 1.000 - - - - - -
64. 5S_rRNA_27 5S_rRNA_27 2 1 - - - - - - - - 1.000
65. cep89 ENSDARG00000005092 4 1 - - - - - 1.000 - - - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
66. BX323448.1 ENSDARG00000116236 10 1 1.000 - - - - - - - -
67. kcnj1a.6 ENSDARG00000088484 4 1 - - 1.000 - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-050420-272]
68. rh50 ENSDARG00000041848 0 1 - - 1.000 - - - - - - Rh50-like protein [Source:ZFIN;Acc:ZDB-GENE-000427-1]
69. acp6 ENSDARG00000040064 197 1 - - - - - 1.000 - - - acid phosphatase 6, lysophosphatidic [Source:ZFIN;Acc:ZDB-GENE-050208-290]
70. MFAP4_5 MFAP4_5 4 1 - - - - - 1.000 - - -
71. ntm ENSDARG00000018065 1 1 - - 1.000 - - - - - - neurotrimin [Source:ZFIN;Acc:ZDB-GENE-060421-6020]
72. si:ch211-229o8.4 si:ch211-229o8.4 1 1 - - - - - 1.000 - - -
73. FRMPD1_2 FRMPD1_2 2 1 - - 1.000 - - - - - -
74. CU041398.1 CU041398.1 17 1 1.000 - - - - - - - -
75. ABCD2 ENSDARG00000059409 1 1 - - - - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
76. CR388416.3 CR388416.3 1 1 - - - - - - - - 1.000
77. si:dkey-88e10.2 si:dkey-88e10.2 7 1 1.000 - - - - - - - -
78. gh1 ENSDARG00000038185 1 1 - - - - - - - - 1.000 growth hormone 1 [Source:ZFIN;Acc:ZDB-GENE-030725-2]
79. vwc2 ENSDARG00000076495 22 1 - - - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
80. nitr3a_1 ENSDARG00000110676 44 1 - - - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
81. abhd2b ENSDARG00000045804, ENSDARG00000115068 23 1 1.000 - - - - - - - - abhydrolase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-061027-74]
82. si:ch211-207l22.2 si:ch211-207l22.2 1 1 - - - - - 1.000 - - -
83. badb ENSDARG00000054937, ENSDARG00000114609 11 1 - - 1.000 - - - - - - BCL2 associated agonist of cell death b [Source:ZFIN;Acc:ZDB-GENE-000616-1]
84. CABZ01049059.1 CABZ01049059.1 0 1 - - - - - 1.000 - - -
85. taar14d ENSDARG00000091705, ENSDARG00000111452 1 1 - - - - - 1.000 - - - trace amine associated receptor 14d [Source:ZFIN;Acc:ZDB-GENE-041210-315]
86. bdkrb1 ENSDARG00000020744 4 1 - - - - - 1.000 - - - bradykinin receptor B1 [Source:ZFIN;Acc:ZDB-GENE-030814-1]
87. cul4a ENSDARG00000096578 14 1 - - - - - 1.000 - - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
88. ENSDARG00000086059 ENSDARG00000086059 9 1 - - - - - 1.000 - - -
89. si:dkey-253d23.9 ENSDARG00000074820 24 1 - - - - - 1.000 - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
90. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 1 - - 1.000 - - - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
91. zgc:113030 ENSDARG00000069869 53 1 - - - - - 1.000 - - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
92. crybb2 ENSDARG00000053512 15 1 - - 1.000 - - - - - - crystallin, beta B2 [Source:ZFIN;Acc:ZDB-GENE-060130-1]
93. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - - - - - 1.000 - - -
94. PKN1 PKN1 42 1 1.000 - - - - - - - -
95. cacng7b ENSDARG00000070624 18 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
96. tnfrsfa ENSDARG00000004451 4 1 - - - - - - - - 1.000 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
97. pou1f1 ENSDARG00000058924, ENSDARG00000110816, ENSDARG00000115109 17 1 - - - - - - - - 1.000 POU class 1 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040630-7]
98. lpar5b ENSDARG00000068638 2 1 - - - - - 1.000 - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
99. st8sia1 ENSDARG00000098221 34 1 - - - - - 1.000 - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051005-1]
100. si:ch211-191n13.1 si:ch211-191n13.1 1 1 - - 1.000 - - - - - -

There are 1583 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA