Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-80h18.1

Gene Name Gene ID Reads Annotation
si:ch211-80h18.1 ENSDARG00000078522 1941 si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]










Genes with expression patterns similar to si:ch211-80h18.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-80h18.1 ENSDARG00000078522 1941 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
2. CR382327.1 ENSDARG00000088739 56 3.485 - - 0.947 0.937 - - - 0.889 0.712
3. otomp ENSDARG00000040306 682 2.916 - - 0.978 0.949 - - - - 0.989 otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
4. FOXL2 239 2.807 1.000 - - - 0.939 - - - 0.868 forkhead box L2, transcript variant X1
5. stm ENSDARG00000035694 1567 2.663 - - - 0.843 - - - 0.897 0.923 starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
6. CR352265.1 ENSDARG00000062758 39 2.659 - - 0.865 - - - - 0.960 0.834
7. GPR137B_1 GPR137B_1 8 2.624 1.000 - - 0.817 - - - 0.807 -
8. cldna ENSDARG00000069888 712 2.498 - - 0.830 0.904 - - - - 0.764 claudin a [Source:ZFIN;Acc:ZDB-GENE-010328-1]
9. CLDN22 CLDN22 114 2.374 - - 0.773 0.748 - - - 0.853 -
10. COL9A1 COL9A1 264 2.373 - - 0.819 0.756 - - - - 0.798
11. cldnj ENSDARG00000058880 59 2.37 - - 0.757 0.804 - - - 0.809 - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
12. zgc:194210 ENSDARG00000073799, ENSDARG00000115078 100 2.313 - - 0.740 0.748 - - - 0.825 - zgc:194210 [Source:ZFIN;Acc:ZDB-GENE-030131-2476]
13. otpb ENSDARG00000058379 1143 2.294 - 0.710 0.727 0.857 - - - - - orthopedia homeobox b [Source:ZFIN;Acc:ZDB-GENE-990708-7]
14. GLIPR1 GLIPR1 37 1.904 1.000 - - - - - 0.904 - -
15. gsc ENSDARG00000059073, ENSDARG00000111184, ENSDARG00000115937 152 1.898 1.000 - - 0.898 - - - - - goosecoid [Source:ZFIN;Acc:ZDB-GENE-980528-2060]
16. CABZ01034707.1 CABZ01034707.1 122 1.805 1.000 - - - - - 0.805 - -
17. diaph3_1 ENSDARG00000090785 3 1.797 1.000 - - 0.797 - - - - - diaphanous-related formin 3 [Source:ZFIN;Acc:ZDB-GENE-040801-144]
18. ms4a17a.1 ENSDARG00000043798 7 1.778 1.000 - 0.778 - - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
19. CR848664.1 CR848664.1 12 1.757 - - - - - 0.841 - 0.916 -
20. ENSDARG00000088389 ENSDARG00000088389 2 1.746 - - - - - - - 0.916 0.830
21. si:dkey-20j1.4 si:dkey-20j1.4 406 1.746 - - - - 0.926 0.820 - - -
22. si:dkeyp-46h3.8 ENSDARG00000093704 9 1.744 1.000 - - 0.744 - - - - - si:dkeyp-46h3.8 [Source:ZFIN;Acc:ZDB-GENE-060503-183]
23. tlr4bb ENSDARG00000022048, ENSDARG00000110914 2 1.742 1.000 - - - - - 0.742 - - toll-like receptor 4b, duplicate b [Source:ZFIN;Acc:ZDB-GENE-040219-9]
24. aven ENSDARG00000002894 49 1.742 1.000 - - - - - 0.742 - - apoptosis, caspase activation inhibitor [Source:ZFIN;Acc:ZDB-GENE-041001-171]
25. tmem88a ENSDARG00000056920 536 1.734 - - - - 0.935 - 0.799 - - transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
26. fgfbp2 fgfbp2 14 1.728 - - - 0.788 - - - 0.940 -
27. larp4b ENSDARG00000062146 1601 1.726 - - - - 0.928 0.798 - - - La ribonucleoprotein domain family, member 4B [Source:ZFIN;Acc:ZDB-GENE-061027-39]
28. c1qtnf1 ENSDARG00000088878 4 1.725 - - - - - - 0.742 - 0.983 C1q and TNF related 1 [Source:ZFIN;Acc:ZDB-GENE-050417-427]
29. cryabb ENSDARG00000101380, ENSDARG00000109545 8 1.722 - - 0.925 0.797 - - - - - crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
30. ATXN1 ATXN1 12 1.715 0.910 - - - - - 0.805 - -
31. RNF214_1 RNF214_1 5 1.71 1.000 0.710 - - - - - - -
32. nkiras2_1 ENSDARG00000052594 31 1.71 1.000 0.710 - - - - - - - NFKB inhibitor interacting Ras-like 2 [Source:ZFIN;Acc:ZDB-GENE-040801-166]
33. CR387932.1 ENSDARG00000097344 2 1.71 1.000 0.710 - - - - - - -
34. SP5 SP5 8 1.708 - - - 0.731 - - - 0.977 -
35. zgc:195195 zgc:195195 6 1.693 - 0.710 - - - - - - 0.983
36. rars2 ENSDARG00000032277 54 1.677 - 0.813 - - - 0.864 - - - arginyl-tRNA synthetase 2, mitochondrial (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-1244]
37. GPR89A ENSDARG00000077983 463 1.674 - - - - - 0.855 0.819 - - G protein-coupled receptor 89A [Source:HGNC Symbol;Acc:HGNC:31984]
38. C20H2orf44 C20H2orf44 486 1.67 0.796 0.874 - - - - - - -
39. TOR4A_1 TOR4A_1 20 1.665 - - - 0.749 - - - 0.916 -
40. FP102191.1 FP102191.1 21 1.659 - - - - - - 0.743 0.916 -
41. si:dkey-222e15.4 10 1.658 - - - - - - 0.742 0.916 - si:dkey-222e15.4, transcript variant X4
42. sts ENSDARG00000053241 10 1.658 - - - - - - 0.742 0.916 - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
43. bricd5 ENSDARG00000056247 1 1.654 - - 0.738 - - - - 0.916 - BRICHOS domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-85]
44. PIGW ENSDARG00000079244 118 1.651 0.910 - - - - 0.741 - - - phosphatidylinositol glycan anchor biosynthesis, class W [Source:ZFIN;Acc:ZDB-GENE-080204-94]
45. s100s ENSDARG00000036773 90 1.645 - - - - - - - 0.825 0.820 S100 calcium binding protein S [Source:ZFIN;Acc:ZDB-GENE-040822-31]
46. ENSDARG00000029117 ENSDARG00000029117 80 1.64 - - 0.707 - - - - - 0.933
47. stx16 ENSDARG00000003307, ENSDARG00000112974 487 1.64 - - - - - 0.907 0.733 - - syntaxin 16 [Source:ZFIN;Acc:ZDB-GENE-060810-113]
48. pip5k2 pip5k2 5743 1.629 - - - - 0.886 - 0.743 - -
49. zgc:173713 17 1.626 - 0.710 - - - - - 0.916 - zgc:173713, transcript variant X2
50. tmeff2b ENSDARG00000058699 82 1.612 - - - - - 0.868 0.744 - - transmembrane protein with EGF-like and two follistatin-like domains 2b [Source:ZFIN;Acc:ZDB-GENE-101001-4]
51. cyp26c1 ENSDARG00000056029 1426 1.605 - - - 0.772 - 0.833 - - - cytochrome P450, family 26, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-050714-2]
52. slc13a5 slc13a5 15 1.601 - 0.739 - - - - 0.862 - -
53. FGFBP1 FGFBP1 7 1.597 - - 0.738 0.859 - - - - -
54. zgc:174311 zgc:174311 3 1.595 - - 0.738 - - 0.857 - - -
55. pou4f3 ENSDARG00000006206 8 1.595 - - 0.738 - - - - - 0.857 POU class 4 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-24]
56. SLC41A2 SLC41A2 202 1.58 - - - - - 0.719 0.861 - -
57. cyp39a1 ENSDARG00000017982 4 1.572 - - - - - - 0.742 - 0.830 cytochrome P450, family 39, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-041014-339]
58. mirlet7i 192 1.568 - 0.749 - - - 0.819 - - - microRNA let-7i
59. dlg3 ENSDARG00000076796, ENSDARG00000111101 2 1.568 - - 0.738 - - - - - 0.830 discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
60. ankrd37 ENSDARG00000056376 131 1.566 - 0.710 0.856 - - - - - - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
61. pvrl4 155 1.565 - 0.710 - - - 0.855 - - - poliovirus receptor-related 4
62. dnajc5b ENSDARG00000058147 6 1.544 - - - 0.797 - - - 0.747 - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
63. pigm ENSDARG00000024277 86 1.54 0.732 - - - - 0.808 - - - phosphatidylinositol glycan anchor biosynthesis, class M [Source:ZFIN;Acc:ZDB-GENE-040426-1393]
64. TMEM98 ENSDARG00000059743 214 1.536 - 0.710 - - - - 0.826 - - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
65. dusp6 ENSDARG00000070914, ENSDARG00000116888 4473 1.531 - - - - 0.826 0.705 - - - dual specificity phosphatase 6 [Source:ZFIN;Acc:ZDB-GENE-030613-1]
66. DNAH10 ENSDARG00000061486 29 1.506 0.796 0.710 - - - - - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
67. EPHB6 ENSDARG00000057729 223 1.506 - 0.780 - 0.726 - - - - - eph receptor B6 [Source:ZFIN;Acc:ZDB-GENE-100922-51]
68. si:dkey-146l4.1 si:dkey-146l4.1 113 1.5 0.751 - - - - - 0.749 - -
69. gfi1aa ENSDARG00000020746 30 1.5 - 0.777 - - - - - 0.723 - growth factor independent 1A transcription repressor a [Source:ZFIN;Acc:ZDB-GENE-050522-534]
70. si:dkey-42i9.8 ENSDARG00000071541 17 1.498 - 0.710 - - - - - - 0.788 si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
71. BX511257.1 BX511257.1 66 1.494 - 0.747 0.747 - - - - - -
72. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1.492 - - - 0.737 - - - 0.755 - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
73. si:ch211-141e20.2 ENSDARG00000093349 61 1.491 - 0.710 - - - 0.781 - - - si:ch211-141e20.2 [Source:ZFIN;Acc:ZDB-GENE-070912-75]
74. cldn11a ENSDARG00000020031 284 1.485 - - - 0.743 - - 0.742 - - claudin 11a [Source:ZFIN;Acc:ZDB-GENE-040718-369]
75. s100t ENSDARG00000055589 453 1.483 - - 0.764 0.719 - - - - - S100 calcium binding protein T [Source:ZFIN;Acc:ZDB-GENE-050320-61]
76. epha4l ENSDARG00000010767 1184 1.479 - - - - - - - 0.718 0.761 eph receptor A4, like [Source:ZFIN;Acc:ZDB-GENE-990415-61]
77. rtel1 ENSDARG00000035074 17 1.475 - - - 0.744 - - - - 0.731 regulator of telomere elongation helicase 1 [Source:ZFIN;Acc:ZDB-GENE-050306-11]
78. cntnap2b ENSDARG00000074558, ENSDARG00000109616, ENSDARG00000116850 559 1.469 - 0.742 0.727 - - - - - - contactin associated protein like 2b [Source:NCBI gene;Acc:563345]
79. slc6a1a ENSDARG00000045944 260 1.454 - 0.750 - 0.704 - - - - - solute carrier family 6 (neurotransmitter transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-060519-23]
80. BX537305.1 ENSDARG00000113834 10 1.454 - 0.710 - 0.744 - - - - -
81. slc7a14b ENSDARG00000079231 6 1.454 - 0.710 - 0.744 - - - - - solute carrier family 7, member 14b [Source:ZFIN;Acc:ZDB-GENE-091113-47]
82. si:ch211-207c6.4 si:ch211-207c6.4 7 1.454 - 0.710 - 0.744 - - - - -
83. STRC ENSDARG00000105391 10 1.453 - - 0.738 - - - - - 0.715 stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
84. si:ch211-215m21.17 si:ch211-215m21.17 14 1.453 - 0.710 - - - - 0.743 - -
85. scfd2 ENSDARG00000040005, ENSDARG00000116272 7 1.452 - 0.710 - - - - 0.742 - - sec1 family domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050320-143]
86. si:ch73-103b2.1 ENSDARG00000095944, ENSDARG00000099867 40 1.452 - 0.710 - - - - 0.742 - - si:ch73-103b2.1 [Source:ZFIN;Acc:ZDB-GENE-110408-42]
87. HIST1H2BA ENSDARG00000116654 10 1.452 - 0.710 - - - - 0.742 - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
88. lmx1a ENSDARG00000020354 111 1.452 - 0.710 - - - - 0.742 - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
89. pigu ENSDARG00000075530 348 1.451 - - - - - 0.710 0.741 - - phosphatidylinositol glycan anchor biosynthesis, class U [Source:ZFIN;Acc:ZDB-GENE-100629-1]
90. pttg1ipa ENSDARG00000090156 44 1.451 0.713 - - - - 0.738 - - - PTTG1 interacting protein a [Source:ZFIN;Acc:ZDB-GENE-030131-505]
91. si:ch211-165d12.4 ENSDARG00000079353 330 1.449 0.732 - - - - - 0.717 - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
92. ttc6 ENSDARG00000104125 7 1.448 - 0.710 0.738 - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
93. BX119910.13 BX119910.13 4 1.448 - 0.710 0.738 - - - - - -
94. si:dkey-97l20.5 si:dkey-97l20.5 33 1.442 0.732 0.710 - - - - - - -
95. cyp2j20 ENSDARG00000094057 44 1.439 - 0.710 - - - - 0.729 - - cytochrome P450, family 2, subfamily J, polypeptide 20 [Source:ZFIN;Acc:ZDB-GENE-041210-324]
96. cdh10 cdh10 38 1.428 - 0.710 - 0.718 - - - - -
97. vrk3 ENSDARG00000036056 424 1.414 0.704 - - - - - 0.710 - - vaccinia related kinase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-246]
98. snrnp48 ENSDARG00000039989, ENSDARG00000112516 237 1.413 - 0.711 - - - - 0.702 - - small nuclear ribonucleoprotein 48 (U11/U12) [Source:ZFIN;Acc:ZDB-GENE-030131-4482]
99. BX004994.2 BX004994.2 17 1 1.000 - - - - - - - -
100. dnm2a ENSDARG00000069937 32 1 1.000 - - - - - - - - dynamin 2a [Source:ZFIN;Acc:ZDB-GENE-050913-84]

There are 2055 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA