Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-79l20.4

Gene Name Gene ID Reads Annotation
si:ch211-79l20.4 1305 si:ch211-79l20.4, transcript variant X3










Genes with expression patterns similar to si:ch211-79l20.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-79l20.4 1305 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-79l20.4, transcript variant X3
2. ctnnbip1 ENSDARG00000038954 2519 2.648 - - - - 0.993 - 0.798 0.857 - catenin, beta interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-3]
3. CR387996.1 ENSDARG00000097774 3037 1.929 - - - - 0.987 - - 0.942 -
4. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.867 - - - - 0.975 - - 0.892 - phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
5. boc ENSDARG00000074335 4832 1.852 - - - - 0.985 - - 0.867 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
6. klc2 3058 1.835 - - - - 0.985 - - 0.850 - kinesin light chain 2
7. dido1 ENSDARG00000057940 3819 1.812 - - - - 0.960 - - 0.852 - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
8. AP3B2 1874 1.775 - - - - 0.891 - - 0.884 - adaptor related protein complex 3 beta 2 subunit, transcript variant X2
9. yy1a ENSDARG00000042796 4982 1.726 - - - - 0.985 0.741 - - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
10. MDFIC ENSDARG00000074223 781 1.715 - 0.807 - - - - - 0.908 - MyoD family inhibitor domain containing [Source:HGNC Symbol;Acc:HGNC:28870]
11. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 1.706 - - - - 0.993 - 0.713 - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
12. si:dkey-12j5.1 ENSDARG00000089480 3198 1.699 - - - - 0.967 0.732 - - - si:dkey-12j5.1 [Source:ZFIN;Acc:ZDB-GENE-100922-71]
13. ugt1b4 ENSDARG00000097024 1848 1.697 - 0.718 - - 0.979 - - - - UDP glucuronosyltransferase 1 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-080227-13]
14. hirip3 ENSDARG00000027749, ENSDARG00000115688 5875 1.684 - 0.837 - - 0.847 - - - - HIRA interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5753]
15. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 1.68 - - - - - - - 0.924 0.756 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
16. wdr92 ENSDARG00000037334 329 1.674 - - - 0.757 - - - 0.917 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
17. smc1al ENSDARG00000058203 8838 1.673 - - - - 0.915 - - - 0.758 structural maintenance of chromosomes 1A, like [Source:ZFIN;Acc:ZDB-GENE-040426-57]
18. scmh1 ENSDARG00000104311, ENSDARG00000110119 413 1.664 - - - - - - 0.754 0.910 - Scm polycomb group protein homolog 1 [Source:ZFIN;Acc:ZDB-GENE-070410-82]
19. ewsr1a ENSDARG00000020258, ENSDARG00000113252 11221 1.656 - - - - 0.868 - - - 0.788 EWS RNA-binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2317]
20. top2a ENSDARG00000024488 4273 1.652 - - - - - - - 0.929 0.723 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
21. hipk3b ENSDARG00000062082 1248 1.646 - 0.723 - - - - - 0.923 - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
22. FBXL3 FBXL3 1769 1.643 - 0.786 - - - - - 0.857 -
23. LDLRAD4 LDLRAD4 1237 1.64 - - - - - - - 0.923 0.717
24. crb2a ENSDARG00000060106 1307 1.635 - - - - - 0.730 - 0.905 - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
25. si:ch211-209n20.57 si:ch211-209n20.57 1188 1.633 - 0.707 - - - - - 0.926 -
26. arhgef10lb ENSDARG00000074244, ENSDARG00000117194 907 1.631 - - - - - 0.714 - 0.917 - Rho guanine nucleotide exchange factor (GEF) 10-like b [Source:ZFIN;Acc:ZDB-GENE-090313-222]
27. ift46 ENSDARG00000011240 2499 1.63 - - - - - 0.722 - 0.908 - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
28. tnfaip3 ENSDARG00000027777 1066 1.623 - - - - - - 0.776 0.847 - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
29. anapc5 ENSDARG00000008461 434 1.622 - - - - - 0.705 - 0.917 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
30. nme3 ENSDARG00000100990 3889 1.619 - - - - 0.775 - - 0.844 - NME/NM23 nucleoside diphosphate kinase 3 [Source:ZFIN;Acc:ZDB-GENE-000210-34]
31. aebp1 ENSDARG00000091726 906 1.618 - 0.726 - - - - - 0.892 - AE binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2390]
32. snrpb ENSDARG00000011125 11729 1.618 - - - - - - 0.777 0.841 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
33. atp6v1d ENSDARG00000011175 8331 1.617 - - - - - 0.706 - 0.911 - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
34. CDCA4 ENSDARG00000042319 7918 1.613 0.733 - - - - - - 0.880 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
35. thrap3b ENSDARG00000098228 4396 1.612 - - - - - 0.766 - 0.846 - thyroid hormone receptor associated protein 3b [Source:ZFIN;Acc:ZDB-GENE-040516-9]
36. CABZ01013938.1 CABZ01013938.1 4497 1.609 - - - - - 0.755 - 0.854 -
37. foxn4 ENSDARG00000010591 2332 1.603 - - - - 0.894 - - 0.709 - forkhead box N4 [Source:ZFIN;Acc:ZDB-GENE-990415-277]
38. Sep-06 Sep-06 5465 1.597 - - - - - - - 0.870 0.727
39. GATAD2B ENSDARG00000005834 3855 1.584 - - - - - - - 0.863 0.721 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
40. get4 ENSDARG00000024398 1818 1.584 - - - - - 0.703 - 0.881 - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
41. arf6b ENSDARG00000052928 4585 1.568 - - - - - 0.717 - 0.851 - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
42. vezf1b ENSDARG00000061030 1410 1.551 - 0.790 - - - - - - 0.761 vascular endothelial zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-060825-121]
43. si:ch73-299h12.6 ENSDARG00000101319 373 1.547 - - - - - 0.750 0.797 - - si:ch73-299h12.6 [Source:ZFIN;Acc:ZDB-GENE-081031-44]
44. exosc7 ENSDARG00000100060 190 1.536 - - - 0.741 - - 0.795 - - exosome component 7 [Source:ZFIN;Acc:ZDB-GENE-050417-47]
45. tmem57a 861 1.529 - - - 0.772 - - 0.757 - - transmembrane protein 57a
46. ezh2 ENSDARG00000010571 3273 1.511 - 0.783 - - - - - - 0.728 enhancer of zeste 2 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-041111-259]
47. rnps1 ENSDARG00000116743 9994 1.509 - - - - - 0.710 0.799 - - RNA binding protein S1, serine-rich domain [Source:NCBI gene;Acc:327020]
48. chd8 ENSDARG00000075543, ENSDARG00000111419 663 1.508 - 0.778 - 0.730 - - - - - chromodomain helicase DNA binding protein 8 [Source:ZFIN;Acc:ZDB-GENE-030131-6320]
49. maf1 ENSDARG00000013122 3365 1.507 - 0.707 - - - - - 0.800 - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
50. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.504 - - - - - - - 0.778 0.726 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
51. znf395a ENSDARG00000060113 3874 1.492 - - - - - 0.728 - 0.764 - zinc finger protein 395a [Source:ZFIN;Acc:ZDB-GENE-061215-52]
52. rbm25 rbm25 3629 1.491 - - - 0.789 - - - - 0.702
53. cyb5b ENSDARG00000099774 1224 1.487 - 0.717 - - - 0.770 - - - cytochrome b5 type B [Source:ZFIN;Acc:ZDB-GENE-040426-2614]
54. CT956064.4 CT956064.4 541 1.485 - - - - - 0.708 0.777 - -
55. usb1 ENSDARG00000003841 524 1.484 0.712 - - 0.772 - - - - - U6 snRNA biogenesis 1 [Source:ZFIN;Acc:ZDB-GENE-040801-197]
56. max ENSDARG00000024844 6035 1.483 - - - - - - - 0.750 0.733 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
57. setd5 ENSDARG00000078576 1974 1.48 - 0.729 - - - - 0.751 - - SET domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-080523-1]
58. scp2b ENSDARG00000102356 951 1.477 - 0.761 - - - 0.716 - - - sterol carrier protein 2b [Source:ZFIN;Acc:ZDB-GENE-041010-196]
59. plxna3 ENSDARG00000007172 1412 1.477 - 0.759 - - - - - - 0.718 plexin A3 [Source:ZFIN;Acc:ZDB-GENE-070613-1]
60. ube2i ube2i 13024 1.476 - - - - 0.712 - - 0.764 -
61. RSF1 RSF1 1242 1.471 - - - - - - 0.755 - 0.716
62. inip ENSDARG00000028523 1925 1.469 - 0.744 - - - - - - 0.725 ints3 and nabp interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-961]
63. rybpb ENSDARG00000053459 1464 1.458 - 0.709 - 0.749 - - - - - RING1 and YY1 binding protein b [Source:ZFIN;Acc:ZDB-GENE-061103-96]
64. si:ch211-262h13.3 ENSDARG00000070898 2094 1.455 - 0.713 - - - - 0.742 - - si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
65. slc17a9b ENSDARG00000011049 231 1.447 - - - 0.723 - - 0.724 - - solute carrier family 17 (vesicular nucleotide transporter), member 9b [Source:ZFIN;Acc:ZDB-GENE-040718-380]
66. med22 ENSDARG00000014148 1307 1.444 - - - - - - 0.737 - 0.707 mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
67. slit3 ENSDARG00000034268, ENSDARG00000111488, ENSDARG00000115194 3999 1.436 - 0.712 - - - 0.724 - - - slit homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-010306-4]
68. pias4a ENSDARG00000007081 4264 1.429 - 0.709 - 0.720 - - - - - protein inhibitor of activated STAT, 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2734]
69. wnt7aa ENSDARG00000044827 645 1.427 - - - 0.712 - - 0.715 - - wingless-type MMTV integration site family, member 7Aa [Source:ZFIN;Acc:ZDB-GENE-051129-1]
70. fbxo11a_1 ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 10566 1.426 - - - 0.722 - - 0.704 - - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
71. hnrnpa0b ENSDARG00000036162, ENSDARG00000112653 27740 1.42 - - - - - - - 0.715 0.705 heterogeneous nuclear ribonucleoprotein A0b [Source:ZFIN;Acc:ZDB-GENE-030131-6154]
72. atad5a ENSDARG00000070568 1840 1.419 - - - - - 0.707 - - 0.712 ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
73. smarca5 ENSDARG00000052348 15433 1.419 - - - - 0.713 - - - 0.706 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5 [Source:ZFIN;Acc:ZDB-GENE-021125-1]
74. clasp1a ENSDARG00000010280 1158 1.418 - - - - - 0.716 0.702 - - cytoplasmic linker associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-081104-520]
75. casp6l1 ENSDARG00000025608, ENSDARG00000117004 107 1.409 - 0.702 - - - - 0.707 - - caspase 6, apoptosis-related cysteine peptidase, like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-48]
76. zgc:66447 ENSDARG00000025577, ENSDARG00000111229 744 0.994 - - - - 0.994 - - - - zgc:66447 [Source:ZFIN;Acc:ZDB-GENE-030131-4748]
77. zgc:162816 ENSDARG00000070416 974 0.994 - - - - 0.994 - - - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
78. smarcal1 ENSDARG00000102265 1921 0.994 - - - - 0.994 - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
79. gli2b ENSDARG00000020884 1468 0.994 - - - - 0.994 - - - - GLI family zinc finger 2b [Source:ZFIN;Acc:ZDB-GENE-050523-1]
80. cpn1 ENSDARG00000005185, ENSDARG00000096728 255 0.993 - - - - 0.993 - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
81. zfyve21 ENSDARG00000027887 1687 0.993 - - - - 0.993 - - - - zinc finger, FYVE domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-030131-1296]
82. shisa3 ENSDARG00000075467 485 0.993 - - - - 0.993 - - - - shisa family member 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2022]
83. rnf11a ENSDARG00000010442 592 0.993 - - - - 0.993 - - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
84. azi1_1 azi1_1 1375 0.993 - - - - 0.993 - - - -
85. commd3 ENSDARG00000045402 1601 0.993 - - - - 0.993 - - - - COMM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041219-3]
86. vsx1 ENSDARG00000056292, ENSDARG00000109766 442 0.993 - - - - 0.993 - - - - visual system homeobox 1 homolog, chx10-like [Source:ZFIN;Acc:ZDB-GENE-990415-205]
87. mutyh 512 0.993 - - - - 0.993 - - - - mutY DNA glycosylase
88. kctd9 kctd9 973 0.993 - - - - 0.993 - - - -
89. KDM5A ENSDARG00000104567 450 0.993 - - - - 0.993 - - - - lysine (K)-specific demethylase 5A [Source:ZFIN;Acc:ZDB-GENE-150114-1]
90. srpk1a ENSDARG00000073997, ENSDARG00000116973 2424 0.992 - - - - 0.992 - - - - SRSF protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2399]
91. zgc:113333 ENSDARG00000038242 797 0.992 - - - - 0.992 - - - - zgc:113333 [Source:ZFIN;Acc:ZDB-GENE-050320-57]
92. NDST1 NDST1 1584 0.992 - - - - 0.992 - - - -
93. stc2a ENSDARG00000056680, ENSDARG00000109468 1156 0.992 - - - - 0.992 - - - - stanniocalcin 2a [Source:ZFIN;Acc:ZDB-GENE-041008-14]
94. st3gal4 ENSDARG00000041006 636 0.992 - - - - 0.992 - - - - ST3 beta-galactoside alpha-2,3-sialyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-050309-174]
95. emid1 ENSDARG00000076119 862 0.992 - - - - 0.992 - - - - EMI domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070705-40]
96. znf609 znf609 1049 0.992 - - - - 0.992 - - - -
97. rqcd1 2301 0.992 - - - - 0.992 - - - - RCD1 required for cell differentiation1 homolog (S. pombe)
98. zgc:162967 zgc:162967 2132 0.992 - - - - 0.992 - - - -
99. pou4f1 ENSDARG00000005559 821 0.992 - - - - 0.992 - - - - POU class 4 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-000523-2]
100. sf3a2 ENSDARG00000021107 2929 0.992 - - - - 0.992 - - - - splicing factor 3a, subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-897]

There are 1292 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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