Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-71n6.4

Gene Name Gene ID Reads Annotation
si:ch211-71n6.4 ENSDARG00000102234 2499 si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]










Genes with expression patterns similar to si:ch211-71n6.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-71n6.4 ENSDARG00000102234 2499 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-71n6.4 [Source:ZFIN;Acc:ZDB-GENE-091204-213]
2. SGPP1 ENSDARG00000060534 1802 1.842 - - - - - 0.842 1.000 - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
3. clasp2 ENSDARG00000020345 3382 1.719 - 0.719 - - - - 1.000 - - cytoplasmic linker associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2343]
4. obscn obscn 146 1.698 - 0.857 - - - 0.841 - - -
5. acbd3 ENSDARG00000042623 2643 1.658 - 0.816 - - - 0.842 - - - acyl-Coenzyme A binding domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1930]
6. cdc42ep1b ENSDARG00000077792 1569 1.648 - 0.748 - - - 0.900 - - - CDC42 effector protein (Rho GTPase binding) 1b [Source:ZFIN;Acc:ZDB-GENE-120215-219]
7. si:dkey-67c22.2 ENSDARG00000055389 6410 1.646 - 0.866 - - - 0.780 - - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
8. map7d1b ENSDARG00000104701 1655 1.629 - 0.907 - - - 0.722 - - - MAP7 domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-080215-23]
9. TEAD1 TEAD1 43 1.617 - 0.839 - - - 0.778 - - -
10. PRPSAP1 ENSDARG00000099222 1249 1.59 - 0.862 - - - 0.728 - - - phosphoribosyl pyrophosphate synthetase-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040704-40]
11. trpm4 trpm4 501 1.59 - 0.831 - - - 0.759 - - -
12. armc1 ENSDARG00000013861 175 1.52 - 0.820 - - - 0.700 - - - armadillo repeat containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-33]
13. cdk2 ENSDARG00000026577 2835 1.504 - 0.740 - - - 0.764 - - - cyclin-dependent kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2741]
14. fam102ab ENSDARG00000016866, ENSDARG00000113063 1080 1.491 - 0.726 - - - 0.765 - - - family with sequence similarity 102, member Ab [Source:ZFIN;Acc:ZDB-GENE-060929-412]
15. MTMR4 1374 1.487 - 0.735 - - - 0.752 - - - myotubularin related protein 4, transcript variant X3
16. s1pr5a ENSDARG00000040526 923 1.481 - 0.717 - - - 0.764 - - - sphingosine-1-phosphate receptor 5a [Source:ZFIN;Acc:ZDB-GENE-041114-188]
17. pnpla7b ENSDARG00000040002 1217 1.478 - 0.718 - - - 0.760 - - - patatin-like phospholipase domain containing 7b [Source:ZFIN;Acc:ZDB-GENE-050309-66]
18. srsf2b ENSDARG00000103893 1437 1.469 - 0.759 - - - 0.710 - - - serine/arginine-rich splicing factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2420]
19. hand2 ENSDARG00000008305 1214 1.465 - 0.756 - - - 0.709 - - - heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
20. rragca ENSDARG00000069829, ENSDARG00000110332 1110 1.453 - 0.721 - - - 0.732 - - - Ras-related GTP binding Ca [Source:ZFIN;Acc:ZDB-GENE-050522-355]
21. tmub1 ENSDARG00000038787 1012 1.438 0.737 - - - - 0.701 - - - transmembrane and ubiquitin-like domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2504]
22. sh3bgrl3 ENSDARG00000098075 3071 1.421 - 0.719 - - - 0.702 - - - SH3 domain binding glutamate-rich protein like 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1059]
23. rhoad rhoad 8007 1 - - - - - - 1.000 - -
24. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1 - - - - - - 1.000 - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
25. psmb1 ENSDARG00000009640 8628 1 - - - - - - 1.000 - - proteasome subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040618-2]
26. SEMA5B SEMA5B 1316 1 - - - - - - 1.000 - -
27. prmt5 ENSDARG00000079605, ENSDARG00000116785 4676 1 - - - - - - 1.000 - - protein arginine methyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-030616-585]
28. foxp1a ENSDARG00000004843 3961 1 - - - - - - 1.000 - - forkhead box P1a [Source:ZFIN;Acc:ZDB-GENE-060929-624]
29. si:dkeyp-13a3.7 si:dkeyp-13a3.7 3422 1 - - - - - - 1.000 - -
30. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1 - - - - - - 1.000 - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
31. aaas ENSDARG00000102274 1192 1 - - - - - - 1.000 - - achalasia, adrenocortical insufficiency, alacrimia [Source:ZFIN;Acc:ZDB-GENE-030912-4]
32. sfrp5 ENSDARG00000039041 1777 1 - - - - - - 1.000 - - secreted frizzled-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-011108-2]
33. map7d3 ENSDARG00000060771 1739 1 - - - - - - 1.000 - - MAP7 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-121129-3]
34. fam133b ENSDARG00000013863 5070 1 - - - - - - 1.000 - - family with sequence similarity 133, member B [Source:ZFIN;Acc:ZDB-GENE-060503-229]
35. gpbp1l1 ENSDARG00000075569, ENSDARG00000112704 3478 1 - - - - - - 1.000 - - GC-rich promoter binding protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-031118-220]
36. selt2 12741 0.999 - - - - - - 0.999 - - selenoprotein T, 2
37. CR548630.1 CR548630.1 3301 0.999 - - - - - - 0.999 - -
38. vbp1 ENSDARG00000030241 10619 0.999 - - - - - - 0.999 - - von Hippel-Lindau binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-494]
39. kpnb1 ENSDARG00000104889 9282 0.999 - - - - - - 0.999 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
40. CAPN2 CAPN2 1497 0.999 - - - - - - 0.999 - -
41. smyd2b ENSDARG00000005629 8181 0.999 - - - - - - 0.999 - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
42. srsf1a ENSDARG00000057691, ENSDARG00000111226 15525 0.998 - - - - - - 0.998 - - serine/arginine-rich splicing factor 1a [Source:ZFIN;Acc:ZDB-GENE-040426-1950]
43. klf11a ENSDARG00000030844 3972 0.998 - - - - - - 0.998 - - Kruppel-like factor 11a [Source:ZFIN;Acc:ZDB-GENE-030131-3568]
44. glulb ENSDARG00000100003, ENSDARG00000113742 19292 0.997 - - - - - - 0.997 - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
45. hspe1 ENSDARG00000056167 21636 0.996 - - - - - - 0.996 - - heat shock 10 protein 1 [Source:ZFIN;Acc:ZDB-GENE-000906-2]
46. apg3l apg3l 5153 0.994 - - - - - - 0.994 - -
47. sdprb sdprb 13647 0.993 - - - - - - 0.993 - -
48. rpl4 ENSDARG00000041182 18655 0.993 - - - - - - 0.993 - - ribosomal protein L4 [Source:ZFIN;Acc:ZDB-GENE-030131-9034]
49. psmc6 ENSDARG00000037038, ENSDARG00000111223, ENSDARG00000114650 25449 0.992 - - - - - - 0.992 - - proteasome 26S subunit, ATPase 6 [Source:ZFIN;Acc:ZDB-GENE-030131-304]
50. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 0.99 - - - - - - 0.990 - - parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
51. syncrip ENSDARG00000040184 24690 0.99 - - - - - - 0.990 - - synaptotagmin binding, cytoplasmic RNA interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4862]
52. mybpc3 ENSDARG00000011615 7271 0.987 - - - - - - 0.987 - - myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
53. tnni1al 8272 0.986 - - - - - - 0.986 - - troponin I, skeletal, slow like, transcript variant X1
54. tegt ENSDARG00000077934 27182 0.978 - - - - - - 0.978 - - testis enhanced gene transcript (BAX inhibitor 1) [Source:ZFIN;Acc:ZDB-GENE-030826-10]
55. f11r f11r 16668 0.976 - - - - - - 0.976 - -
56. atp2a1l ENSDARG00000035458 6222 0.971 - - - - - - 0.971 - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, like [Source:ZFIN;Acc:ZDB-GENE-041229-2]
57. rtn4a ENSDARG00000044601, ENSDARG00000112237 24526 0.957 - - - - - - 0.957 - - reticulon 4a [Source:ZFIN;Acc:ZDB-GENE-030710-1]
58. rps13 ENSDARG00000036298, ENSDARG00000112818 58520 0.956 - - - - - - 0.956 - - ribosomal protein S13 [Source:ZFIN;Acc:ZDB-GENE-040625-52]
59. flna ENSDARG00000074201 26242 0.955 - - - - - - 0.955 - - filamin A, alpha (actin binding protein 280) [Source:ZFIN;Acc:ZDB-GENE-030131-2145]
60. rpl39 ENSDARG00000036316, ENSDARG00000117167 80631 0.953 - - - - - - 0.953 - - ribosomal protein L39 [Source:ZFIN;Acc:ZDB-GENE-040625-51]
61. cirbp cirbp 88363 0.943 - - - - - - 0.943 - -
62. fkbp7 ENSDARG00000010962 2986 0.932 - 0.932 - - - - - - - FK506 binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-030616-182]
63. aup1 ENSDARG00000092609 2431 0.928 - 0.928 - - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
64. wu:fu71h07 ENSDARG00000103860 558 0.927 - 0.927 - - - - - - - wu:fu71h07 [Source:ZFIN;Acc:ZDB-GENE-050302-121]
65. zgc:113385 zgc:113385 297 0.925 - 0.925 - - - - - - -
66. golga4 ENSDARG00000075331 447 0.923 - 0.923 - - - - - - - golgin A4 [Source:ZFIN;Acc:ZDB-GENE-050208-275]
67. col11a1a ENSDARG00000026165, ENSDARG00000115341 43138 0.922 - - - - - - 0.922 - - collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
68. ccnd2a ENSDARG00000051748 2506 0.917 - 0.917 - - - - - - - cyclin D2, a [Source:ZFIN;Acc:ZDB-GENE-070424-30]
69. zbtb10 ENSDARG00000077101 8683 0.917 - - - - - 0.917 - - - zinc finger and BTB domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030429-10]
70. c8a ENSDARG00000039516 495 0.915 - 0.915 - - - - - - - complement component 8, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040801-239]
71. hmgcrb ENSDARG00000105206 2080 0.912 - 0.912 - - - - - - - 3-hydroxy-3-methylglutaryl-CoA reductase b [Source:ZFIN;Acc:ZDB-GENE-051108-1]
72. cotl1 ENSDARG00000026829 23295 0.911 - - - - - - 0.911 - - coactosin-like F-actin binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8325]
73. rpl35 ENSDARG00000018334 69583 0.911 - - - - - - 0.911 - - ribosomal protein L35 [Source:ZFIN;Acc:ZDB-GENE-020419-2]
74. prkar1ab ENSDARG00000101755 555 0.911 - 0.911 - - - - - - - protein kinase, cAMP-dependent, regulatory, type I, alpha (tissue specific extinguisher 1) b [Source:ZFIN;Acc:ZDB-GENE-050417-238]
75. ckap5 ENSDARG00000102674 5068 0.907 - 0.907 - - - - - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
76. tspan2 tspan2 948 0.905 - 0.905 - - - - - - -
77. sirt2 ENSDARG00000011488 5389 0.904 - 0.904 - - - - - - - sirtuin 2 (silent mating type information regulation 2, homolog) 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1028]
78. EDEM3 ENSDARG00000074129 805 0.903 - 0.903 - - - - - - - ER degradation enhancer, mannosidase alpha-like 3 [Source:ZFIN;Acc:ZDB-GENE-070801-5]
79. CABZ01088149.1 ENSDARG00000114019 530 0.902 - - - - - 0.902 - - - mitochondrial ubiquitin ligase activator of nfkb 1-A [Source:NCBI gene;Acc:402879]
80. mfsd11 ENSDARG00000102828 1043 0.902 - 0.902 - - - - - - - major facilitator superfamily domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-050913-140]
81. rps23 ENSDARG00000021838 145026 0.901 - - - - - - 0.901 - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
82. tmem194a tmem194a 745 0.9 - 0.900 - - - - - - -
83. slc2a10 ENSDARG00000090820 637 0.899 - 0.899 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
84. pddc1 pddc1 257 0.899 - 0.899 - - - - - - -
85. l3mbtl2 ENSDARG00000056079, ENSDARG00000116037 1645 0.899 - 0.899 - - - - - - - l(3)mbt-like 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-8713]
86. cryz ENSDARG00000016074 322 0.898 - - - - - 0.898 - - - crystallin, zeta (quinone reductase) [Source:ZFIN;Acc:ZDB-GENE-050306-24]
87. sec13 ENSDARG00000054807, ENSDARG00000109318, ENSDARG00000110540 470 0.898 - 0.898 - - - - - - - SEC13 homolog, nuclear pore and COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-040426-2649]
88. slc25a11 ENSDARG00000035741 3377 0.897 - 0.897 - - - - - - - solute carrier family 25 (mitochondrial carrier; oxoglutarate carrier), member 11 [Source:ZFIN;Acc:ZDB-GENE-040625-79]
89. ergic1 ENSDARG00000100047 814 0.896 - 0.896 - - - - - - - endoplasmic reticulum-golgi intermediate compartment 1 [Source:ZFIN;Acc:ZDB-GENE-050913-75]
90. itpkb ENSDARG00000010059 2352 0.895 - 0.895 - - - - - - - inositol-trisphosphate 3-kinase B [Source:ZFIN;Acc:ZDB-GENE-041014-166]
91. h2afvb ENSDARG00000116491 35692 0.895 - - - - - - 0.895 - - H2A histone family, member Vb [Source:ZFIN;Acc:ZDB-GENE-050506-24]
92. akr1a1b ENSDARG00000052030, ENSDARG00000112549 2505 0.894 - 0.894 - - - - - - - aldo-keto reductase family 1, member A1b (aldehyde reductase) [Source:ZFIN;Acc:ZDB-GENE-050417-118]
93. igfbp1b ENSDARG00000038666 163 0.894 - 0.894 - - - - - - - insulin-like growth factor binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081210-3]
94. csad ENSDARG00000026348 1461 0.894 - 0.894 - - - - - - - cysteine sulfinic acid decarboxylase [Source:ZFIN;Acc:ZDB-GENE-041114-36]
95. lcn15 ENSDARG00000067851 140 0.894 - 0.894 - - - - - - - lipocalin 15 [Source:ZFIN;Acc:ZDB-GENE-060825-349]
96. SEC16B ENSDARG00000099554 411 0.893 - 0.893 - - - - - - - SEC16 homolog B, endoplasmic reticulum export factor [Source:ZFIN;Acc:ZDB-GENE-050208-274]
97. BX005085.1 ENSDARG00000089947 230 0.891 - 0.891 - - - - - - -
98. sas sas 1783 0.891 - 0.891 - - - - - - -
99. birc5a ENSDARG00000075621 2256 0.891 - 0.891 - - - - - - - baculoviral IAP repeat containing 5a [Source:ZFIN;Acc:ZDB-GENE-030826-1]
100. rpsa ENSDARG00000019181 93440 0.89 - - - - - - 0.890 - - ribosomal protein SA [Source:ZFIN;Acc:ZDB-GENE-040426-811]

There are 1076 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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