Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-71m22.3

Gene Name Gene ID Reads Annotation
si:ch211-71m22.3 ENSDARG00000079075 4 si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]










Genes with expression patterns similar to si:ch211-71m22.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-71m22.3 ENSDARG00000079075 4 4 - - 1.000 - 1.000 1.000 - 1.000 - si:ch211-71m22.3 [Source:ZFIN;Acc:ZDB-GENE-070705-195]
2. SLC4A8 ENSDARG00000015531 16 2 - - 1.000 - - 1.000 - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
3. CU570981.1 CU570981.1 9 2 - - 1.000 - - 1.000 - - -
4. tmem176l.2 ENSDARG00000089399 22 2 - - 1.000 - - 1.000 - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]
5. zgc:174704 10 1.989 - - - - 0.989 1.000 - - - zgc:174704, transcript variant X2
6. si:ch211-64i20.3 ENSDARG00000089934, ENSDARG00000105063 42 1.844 - - 1.000 - - 0.844 - - - si:ch211-64i20.3 [Source:ZFIN;Acc:ZDB-GENE-110913-55]
7. CU183952.2 CU183952.2 6 1.82 - - 0.820 - - 1.000 - - -
8. CT867973.1 ENSDARG00000114801 13 1 - - - - - - - 1.000 -
9. CABZ01055869.1 CABZ01055869.1 2 1 - - - - - 1.000 - - -
10. isg15 ENSDARG00000086374 8 1 - - - - - 1.000 - - - ISG15 ubiquitin-like modifier [Source:ZFIN;Acc:ZDB-GENE-021211-1]
11. TMBIM1 TMBIM1 2 1 - - - - - 1.000 - - -
12. ppm1na ENSDARG00000010231 3 1 - - - - - 1.000 - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
13. ROBO3 ENSDARG00000005645 10 1 - - 1.000 - - - - - - roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]
14. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - 1.000 - - -
15. si:ch211-284f7.1 si:ch211-284f7.1 1 1 - - - - - - - 1.000 -
16. tsen54 ENSDARG00000036844 11 1 - - - - - - - 1.000 - TSEN54 tRNA splicing endonuclease subunit [Source:ZFIN;Acc:ZDB-GENE-050522-454]
17. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - - - - - 1.000 - - -
18. GPT GPT 2 1 - - 1.000 - - - - - -
19. top3b ENSDARG00000027586 8 1 - - - - - 1.000 - - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
20. si:ch73-249k16.1 si:ch73-249k16.1 36 1 - - - - - 1.000 - - -
21. mamdc2a ENSDARG00000098345 21 1 - - 1.000 - - - - - - MAM domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-16]
22. si:ch211-10j20.1 si:ch211-10j20.1 24 1 - - - - - 1.000 - - -
23. si:ch211-220f16.1 ENSDARG00000093977 4 1 - - - - - - - 1.000 - si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
24. notchl ENSDARG00000088308 28 1 - - - - 1.000 - - - - notch homolog, like [Source:ZFIN;Acc:ZDB-GENE-070220-2]
25. cabp7b ENSDARG00000060846 5 1 - - - - - 1.000 - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
26. si:dkey-228d14.8 si:dkey-228d14.8 3 1 - - 1.000 - - - - - -
27. SLC16A1 SLC16A1 37 1 - - - - - 1.000 - - -
28. CABZ01079442.1 CABZ01079442.1 1 1 - - 1.000 - - - - - -
29. cplx3a ENSDARG00000062508, ENSDARG00000099196, ENSDARG00000112735 58 1 - - - - - 1.000 - - - complexin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-349]
30. PIK3R6_1 PIK3R6_1 1 1 - - 1.000 - - - - - -
31. th2 ENSDARG00000038384 1 1 - - 1.000 - - - - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
32. si:dkey-219e20.3 si:dkey-219e20.3 1 1 - - - - - 1.000 - - -
33. PRKD2_1 PRKD2_1 1 1 - - - - - 1.000 - - -
34. eva1c ENSDARG00000056024 1 1 - - - - - - - 1.000 - eva-1 homolog C (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-091204-329]
35. SNORD88 SNORD88 232 1 - - - - - 1.000 - - -
36. wdr27 ENSDARG00000053386 2 1 - - - - - 1.000 - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
37. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - 1.000 - - - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
38. pkz ENSDARG00000052396 2 1 - - - - - - - 1.000 - protein kinase containing Z-DNA binding domains [Source:ZFIN;Acc:ZDB-GENE-050301-2]
39. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - - - 1.000 - - -
40. RIMS2 RIMS2 2 1 - - - - - - - 1.000 -
41. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 1 - - - - - 1.000 - - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
42. morc3b ENSDARG00000043271 8 1 - - 1.000 - - - - - - MORC family CW-type zinc finger 3b [Source:ZFIN;Acc:ZDB-GENE-040801-98]
43. MFAP4_6 MFAP4_6 162 1 - - - - - 1.000 - - -
44. TMEM55B TMEM55B 76 1 - - - - - 1.000 - - -
45. CHD6 ENSDARG00000017244 219 1 - - - - - 1.000 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
46. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1 - - - - - 1.000 - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
47. cabp5b ENSDARG00000028485, ENSDARG00000110087 1 1 - - 1.000 - - - - - - calcium binding protein 5b [Source:ZFIN;Acc:ZDB-GENE-050522-146]
48. prg4a ENSDARG00000010482 10 1 - - - - - - - 1.000 - proteoglycan 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8295]
49. si:ch211-182e10.4 ENSDARG00000070661, ENSDARG00000070757 1 1 - - 1.000 - - - - - - si:ch211-182e10.4 [Source:ZFIN;Acc:ZDB-GENE-041014-76]
50. NEK11 ENSDARG00000087564 40 1 - - - - - - - 1.000 - NIMA-related kinase 11 [Source:ZFIN;Acc:ZDB-GENE-100922-73]
51. CACNA2D1 ENSDARG00000073752 6 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
52. si:ch211-241f4.1 si:ch211-241f4.1 2 1 - - - - 1.000 - - - -
53. FAM188B2 4 1 - - - - - 1.000 - - - family with sequence similarity 188, member B2
54. CCDC88A_1 CCDC88A_1 12 1 - - - - - 1.000 - - -
55. CU915534.1 ENSDARG00000105830 1 1 - - - - - 1.000 - - -
56. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - 1.000 - - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
57. BX950859.2 BX950859.2 10 1 - - 1.000 - - - - - -
58. CU571310.1 ENSDARG00000102580 53 1 - - - - - 1.000 - - - ras-related protein Rab-39A-like [Source:NCBI gene;Acc:100330257]
59. CU464087.2 CU464087.2 15 1 - - 1.000 - - - - - -
60. ppp1r3db ENSDARG00000076248 32 1 - - - - - 1.000 - - - protein phosphatase 1, regulatory subunit 3Db [Source:ZFIN;Acc:ZDB-GENE-110201-1]
61. fasn ENSDARG00000087657 99 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
62. FBXO10 ENSDARG00000061936, ENSDARG00000116317 3 1 - - - - - - - 1.000 - F-box protein 10 [Source:ZFIN;Acc:ZDB-GENE-090313-270]
63. slc7a10b ENSDARG00000051730 44 1 - - - - - 1.000 - - - solute carrier family 7 (neutral amino acid transporter light chain, asc system), member 10b [Source:ZFIN;Acc:ZDB-GENE-121105-2]
64. VASH1 ENSDARG00000092716 33 1 - - - - - 1.000 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
65. slc35f3a ENSDARG00000075909 1 1 - - - - - 1.000 - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
66. BPHL ENSDARG00000102877 28 1 - - - - - 1.000 - - - biphenyl hydrolase like [Source:ZFIN;Acc:ZDB-GENE-170623-2]
67. hapln4 ENSDARG00000018542 10 1 - - - - - 1.000 - - - hyaluronan and proteoglycan link protein 4 [Source:ZFIN;Acc:ZDB-GENE-060503-243]
68. nr1d1 ENSDARG00000033160 3 1 - - - - 1.000 - - - - nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]
69. akap1a ENSDARG00000089802 5 1 - - - - - - - 1.000 - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
70. si:dkeyp-27e10.7 si:dkeyp-27e10.7 5 1 - - - - - - - 1.000 -
71. si:dkey-220o21.2 si:dkey-220o21.2 19 1 - - - - - 1.000 - - -
72. PLBD1 ENSDARG00000063313 1 1 - - 1.000 - - - - - - phospholipase B domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050411-22]
73. tmem86a ENSDARG00000044034 1 1 - - - - - 1.000 - - - transmembrane protein 86A [Source:ZFIN;Acc:ZDB-GENE-050320-81]
74. CABZ01118769.1 CABZ01118769.1 9 1 - - - - - - - 1.000 -
75. tmem44 ENSDARG00000068193 8 1 - - - - - 1.000 - - - transmembrane protein 44 [Source:ZFIN;Acc:ZDB-GENE-060825-65]
76. fgf14 ENSDARG00000040982 5 1 - - - - - - - 1.000 - fibroblast growth factor 14 [Source:ZFIN;Acc:ZDB-GENE-060506-1]
77. snx24 ENSDARG00000053527 31 1 - - - - - 1.000 - - - sorting nexin 24 [Source:ZFIN;Acc:ZDB-GENE-050913-45]
78. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - - - - 1.000 -
79. CU179703.1 CU179703.1 5 1 - - - - 1.000 - - - -
80. ggt1l2.1 ENSDARG00000075055 0 1 - - - - - - - 1.000 - gamma-glutamyltransferase 1 like 2.1 [Source:ZFIN;Acc:ZDB-GENE-090312-32]
81. cga ENSDARG00000040479 3 1 - - - - - 1.000 - - - glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
82. si:dkey-4e4.1 ENSDARG00000096026, ENSDARG00000109251 48 1 - - - - - 1.000 - - - si:dkey-4e4.1 [Source:ZFIN;Acc:ZDB-GENE-110914-73]
83. pcdh2aa3 0 1 - - - - - 1.000 - - - protocadherin 2 alpha a 3
84. ifit2 ifit2 11 1 - - - - - 1.000 - - -
85. U1_46 U1_46 1 1 - - 1.000 - - - - - -
86. si:ch211-260c23.1 13 1 - - 1.000 - - - - - - si:ch211-260c23.1, transcript variant X7
87. RGS9BP ENSDARG00000086756 65 1 - - 1.000 - - - - - - regulator of G protein signaling 9 binding protein [Source:HGNC Symbol;Acc:HGNC:30304]
88. zgc:158260_1 ENSDARG00000101703 0 1 - - - - - 1.000 - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
89. FETUB ENSDARG00000053973 4 1 - - 1.000 - - - - - - fetuin B [Source:ZFIN;Acc:ZDB-GENE-050208-4]
90. adam10b ENSDARG00000015502 26 1 - - - - - - - 1.000 - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
91. CR848784.2 ENSDARG00000111157 16 1 - - 1.000 - - - - - -
92. CR533575.1 CR533575.1 0 1 - - - - - 1.000 - - -
93. AL935186.3 ENSDARG00000109223 19 1 - - - - - 1.000 - - -
94. si:dkeyp-27b10.1 si:dkeyp-27b10.1 9 1 - - - - - 1.000 - - -
95. si:dkey-11f14.2 si:dkey-11f14.2 2 1 - - - - - 1.000 - - -
96. CENPA 63 1 - - - - - 1.000 - - - histone H3-like centromeric protein A
97. twsg1b 7 1 - - 1.000 - - - - - - twisted gastrulation BMP signaling modulator 1b
98. si:dkey-208n4.1 si:dkey-208n4.1 10 1 - - - - - 1.000 - - -
99. si:ch211-167j6.3 ENSDARG00000095504 5 1 - - 1.000 - - - - - - si:ch211-167j6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-145]
100. si:dkey-88n24.8 ENSDARG00000091095 9 1 - - - - - 1.000 - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]

There are 312 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA