Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-69g19.2

Gene Name Gene ID Reads Annotation
si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]










Genes with expression patterns similar to si:ch211-69g19.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-69g19.2 ENSDARG00000070656, ENSDARG00000110191, ENSDARG00000114528 2860 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-69g19.2 [Source:ZFIN;Acc:ZDB-GENE-030804-13]
2. gpm6bb ENSDARG00000001676 2005 2.892 0.711 - - 0.714 0.711 - 0.756 - - glycoprotein M6Bb [Source:ZFIN;Acc:ZDB-GENE-030710-10]
3. tmbim4 ENSDARG00000014361 2549 2.675 - - - - - 0.803 - 0.882 0.990 transmembrane BAX inhibitor motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2152]
4. zfr ENSDARG00000027109, ENSDARG00000116459 4171 2.441 0.720 - - - - - - 0.733 0.988 zinc finger RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-378]
5. golgb1 ENSDARG00000061951 2023 2.339 - 0.732 - - - - 0.803 0.804 - golgin B1 [Source:ZFIN;Acc:ZDB-GENE-030429-9]
6. creb1a ENSDARG00000053586 5068 2.317 - - - - 0.710 - 0.789 0.818 - cAMP responsive element binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-040426-750]
7. snx27b ENSDARG00000016977 2768 1.895 - - - - - - - 0.904 0.991 sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
8. nhsl1b ENSDARG00000042627 3697 1.848 - - - - - - - 0.864 0.984 NHS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040910-1]
9. carhsp1 ENSDARG00000053129 2100 1.8 - - - - - 0.810 - - 0.990 calcium regulated heat stable protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1479]
10. LIMD2 ENSDARG00000078092 3414 1.782 - 0.814 - - - - - - 0.968 LIM domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-120906-1]
11. smad7 ENSDARG00000016858 1660 1.765 - 0.831 - - - - - - 0.934 SMAD family member 7 [Source:ZFIN;Acc:ZDB-GENE-030128-3]
12. rgs19 ENSDARG00000077385 783 1.757 - - - - - 0.766 - - 0.991 regulator of G protein signaling 19 [Source:ZFIN;Acc:ZDB-GENE-080723-72]
13. nbr1 nbr1 1161 1.752 - 0.762 - - - - - - 0.990
14. cand1 ENSDARG00000017841 8164 1.751 - - - - - - 0.825 - 0.926 cullin-associated and neddylation-dissociated 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2872]
15. UBE2QL1 ENSDARG00000079276 3474 1.746 0.779 - - - - - - - 0.967 ubiquitin-conjugating enzyme E2Q family-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8137]
16. sox2 ENSDARG00000070913 2763 1.743 0.749 - - - - - - - 0.994 SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
17. CABZ01080492.1 CABZ01080492.1 495 1.734 - 0.743 - - - - - - 0.991
18. zgc:113278 ENSDARG00000037813 525 1.719 - - - - - - 0.817 0.902 - zgc:113278 [Source:ZFIN;Acc:ZDB-GENE-050327-66]
19. ccdc94 1417 1.712 - - - - - 0.793 0.919 - - coiled-coil domain containing 94
20. NAT16 ENSDARG00000086222 4682 1.698 0.709 - - - - - - - 0.989 N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
21. GID4 ENSDARG00000079482 1375 1.697 - 0.842 - - - - - 0.855 - GID complex subunit 4 homolog [Source:HGNC Symbol;Acc:HGNC:28453]
22. si:ch211-120p12.3 1079 1.692 - 0.792 - - - - - 0.900 - si:ch211-120p12.3, transcript variant X2
23. sin3ab ENSDARG00000059812 2140 1.691 - - - 0.842 - - 0.849 - - SIN3 transcription regulator family member Ab [Source:ZFIN;Acc:ZDB-GENE-030131-2066]
24. tkt tkt 7203 1.689 - 0.703 - - - - - - 0.986
25. alpi.1 ENSDARG00000015273 1712 1.685 - 0.812 - - - - - 0.873 - alkaline phosphatase, intestinal, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050327-78]
26. vdac1 ENSDARG00000045132 8051 1.683 0.841 0.842 - - - - - - - voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
27. zgc:113054 ENSDARG00000053483 1079 1.682 - 0.863 - - - - - 0.819 - zgc:113054 [Source:ZFIN;Acc:ZDB-GENE-050320-9]
28. GRAMD4 GRAMD4 1967 1.645 - - - - - 0.742 0.903 - -
29. nova2 ENSDARG00000017673 7685 1.645 0.766 - - - - - - 0.879 - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
30. gata3 ENSDARG00000016526 1857 1.645 - 0.869 - - - 0.776 - - - GATA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-990415-82]
31. mgst3 mgst3 3982 1.639 - 0.825 - - - - - 0.814 -
32. neo1 neo1 4056 1.638 - - - - 0.736 - - 0.902 -
33. irs1 ENSDARG00000054087 1809 1.636 - 0.841 - - - - 0.795 - - insulin receptor substrate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-872]
34. mrpl19 ENSDARG00000011885 2208 1.634 - - - - - 0.759 - 0.875 - mitochondrial ribosomal protein L19 [Source:ZFIN;Acc:ZDB-GENE-040801-55]
35. usp33 ENSDARG00000016163 651 1.629 - - - - - 0.812 0.817 - - ubiquitin specific peptidase 33 [Source:ZFIN;Acc:ZDB-GENE-040426-2323]
36. lfng ENSDARG00000037879 11783 1.622 0.764 - - - - - - 0.858 - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
37. grnb ENSDARG00000025081 716 1.614 - - - - - 0.715 - 0.899 - granulin b [Source:ZFIN;Acc:ZDB-GENE-030131-7393]
38. fam46c 1913 1.614 - - - - - - 0.744 0.870 - family with sequence similarity 46, member C
39. ube2w ENSDARG00000044923 438 1.608 - - - - - 0.753 0.855 - - ubiquitin-conjugating enzyme E2W (putative) [Source:ZFIN;Acc:ZDB-GENE-050506-94]
40. psmd1 ENSDARG00000003189 4373 1.601 - - - - - 0.872 0.729 - - proteasome 26S subunit, non-ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-810]
41. DFNA5 DFNA5 201 1.597 - - - - - 0.727 0.870 - -
42. rfc3 ENSDARG00000055969, ENSDARG00000112402 1448 1.592 - 0.809 - - - 0.783 - - - replication factor C (activator 1) 3 [Source:ZFIN;Acc:ZDB-GENE-020809-3]
43. b2ml ENSDARG00000015887 1060 1.581 - 0.805 - - - 0.776 - - - beta-2-microglobulin, like [Source:ZFIN;Acc:ZDB-GENE-040426-2136]
44. NAIF1_1 NAIF1_1 1336 1.579 - 0.780 - - - 0.799 - - -
45. r3hdm1 ENSDARG00000101458 5241 1.579 - - - - - 0.721 - 0.858 - R3H domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7119]
46. snx1a ENSDARG00000071031 3975 1.576 - 0.731 - - - - - 0.845 - sorting nexin 1a [Source:ZFIN;Acc:ZDB-GENE-060302-3]
47. ogt.1 ENSDARG00000099455, ENSDARG00000105243 3274 1.568 - 0.721 - - - - - 0.847 - O-linked N-acetylglucosamine (GlcNAc) transferase, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9631]
48. arfgef1 ENSDARG00000063474 1131 1.558 - 0.794 - - - - 0.764 - - ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited) [Source:ZFIN;Acc:ZDB-GENE-030131-108]
49. FOXO4 ENSDARG00000055792 1457 1.555 - 0.824 - - - - 0.731 - - forkhead box O4 [Source:ZFIN;Acc:ZDB-GENE-150311-1]
50. vrk1 ENSDARG00000018006 1759 1.552 - - - 0.828 - 0.724 - - - vaccinia related kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2709]
51. paip2b ENSDARG00000008706 4255 1.552 - - - - - 0.792 0.760 - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
52. cib1 ENSDARG00000103118 291 1.541 - 0.798 - - - - 0.743 - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
53. ankrd12 ENSDARG00000052419 2579 1.541 - 0.785 - - - 0.756 - - - ankyrin repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-040426-846]
54. dhx8 ENSDARG00000054707 2088 1.54 - 0.743 - - - - 0.797 - - DEAH (Asp-Glu-Ala-His) box polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-050809-39]
55. ctdspl2b ENSDARG00000060586 1682 1.537 0.707 - - - - - 0.830 - - CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-1809]
56. reep2 ENSDARG00000031382, ENSDARG00000112622 563 1.534 0.766 - - - - - 0.768 - - receptor accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-125]
57. si:ch211-218c6.8 ENSDARG00000092364 1270 1.531 - - - - - - 0.701 0.830 - si:ch211-218c6.8 [Source:ZFIN;Acc:ZDB-GENE-050419-103]
58. slc50a1 ENSDARG00000015158 329 1.524 - 0.807 - - - 0.717 - - - solute carrier family 50 (sugar efflux transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-050220-11]
59. rbm38 ENSDARG00000058818 647 1.519 - - - - - 0.718 0.801 - - RNA binding motif protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-5923]
60. ldb1a ENSDARG00000010137 3035 1.516 - 0.754 - 0.762 - - - - - LIM domain binding 1a [Source:ZFIN;Acc:ZDB-GENE-990415-138]
61. nupr1 6040 1.516 - - - - - 0.706 0.810 - - nuclear protein 1
62. MDC1 ENSDARG00000086764 1851 1.513 0.753 - - 0.760 - - - - - mediator of DNA damage checkpoint 1 [Source:ZFIN;Acc:ZDB-GENE-060810-185]
63. ugt5b2 ENSDARG00000101495 512 1.512 - 0.794 - - - - 0.718 - - UDP glucuronosyltransferase 5 family, polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-100406-4]
64. trnau1apa ENSDARG00000101323 911 1.51 - - - 0.741 - 0.769 - - - tRNA selenocysteine 1 associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-050522-502]
65. fam60al 2846 1.509 0.767 - - - 0.742 - - - - family with sequence similarity 60, member A, like
66. si:ch211-11n16.2 ENSDARG00000099779 417 1.501 - 0.760 - - - - 0.741 - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
67. usp5 ENSDARG00000014517, ENSDARG00000114598 1969 1.499 - 0.794 0.705 - - - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
68. smc2 ENSDARG00000017744, ENSDARG00000114076 2271 1.497 - - - 0.741 - - 0.756 - - structural maintenance of chromosomes 2 [Source:ZFIN;Acc:ZDB-GENE-030131-105]
69. ppp1r7 ENSDARG00000009740 2606 1.493 - 0.731 - - - - 0.762 - - protein phosphatase 1, regulatory (inhibitor) subunit 7 [Source:ZFIN;Acc:ZDB-GENE-051113-288]
70. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.492 0.760 - - 0.732 - - - - - S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
71. clpxa ENSDARG00000029063 1188 1.486 - 0.764 - - - - 0.722 - - caseinolytic mitochondrial matrix peptidase chaperone subunit a [Source:ZFIN;Acc:ZDB-GENE-040912-143]
72. yy1a ENSDARG00000042796 4982 1.485 - - - - - 0.782 0.703 - - YY1 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-1117]
73. dnmt3b dnmt3b 2522 1.484 - 0.747 - 0.737 - - - - -
74. mgat2 ENSDARG00000052408 264 1.476 - 0.743 - - - 0.733 - - - mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-070410-54]
75. ZFHX3 ENSDARG00000103057 7759 1.472 0.706 - - 0.766 - - - - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
76. TTC31 TTC31 1088 1.47 - - - 0.716 - - 0.754 - -
77. osbpl2b ENSDARG00000013830, ENSDARG00000114103 393 1.467 - 0.708 - - - - 0.759 - - oxysterol binding protein-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6138]
78. hnrpdl 14288 1.466 - - - - 0.702 - - 0.764 - heterogeneous nuclear ribonucleoprotein D-like, transcript variant X2
79. map2k2a ENSDARG00000006609 856 1.463 - 0.751 - - - 0.712 - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
80. CYYR1 ENSDARG00000103783 4107 1.463 - - - 0.754 - 0.709 - - - cysteine/tyrosine-rich 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2356]
81. unc119.1 ENSDARG00000009629 1193 1.46 - 0.711 - - - 0.749 - - - unc-119 homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030219-130]
82. pcf11 ENSDARG00000044625, ENSDARG00000114082 1885 1.456 - - - - - 0.753 0.703 - - PCF11, cleavage and polyadenylation factor subunit [Source:ZFIN;Acc:ZDB-GENE-041114-175]
83. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.453 - - - - 0.741 - 0.712 - - ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
84. rprd2a ENSDARG00000058089 743 1.441 - - - 0.740 - - 0.701 - - regulation of nuclear pre-mRNA domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-030131-6641]
85. znf292b ENSDARG00000043973 3791 1.441 - 0.725 - - - 0.716 - - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
86. pqbp1 ENSDARG00000029724 1472 1.438 - - - 0.707 - 0.731 - - - polyglutamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030616-158]
87. crebbpb ENSDARG00000104148, ENSDARG00000112452 1926 1.436 - - - 0.730 - 0.706 - - - CREB binding protein b [Source:ZFIN;Acc:ZDB-GENE-050302-102]
88. wdr5 ENSDARG00000016903 4834 1.432 0.710 - - - 0.722 - - - - WD repeat domain 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2082]
89. cnot10 ENSDARG00000058528 478 1.43 - - - - - 0.708 0.722 - - CCR4-NOT transcription complex, subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060929-368]
90. nsfl1c ENSDARG00000087640 2226 0.998 - - - - - - - - 0.998 NSFL1 (p97) cofactor (p47) [Source:ZFIN;Acc:ZDB-GENE-041114-160]
91. hcfc1b ENSDARG00000012519 3633 0.996 - - - - - - - - 0.996 host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
92. celf4 ENSDARG00000070045 1537 0.993 - - - - - - - - 0.993 CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
93. mgea5 6076 0.993 - - - - - - - - 0.993 meningioma expressed antigen 5 (hyaluronidase), transcript variant X2
94. PRKAR2B ENSDARG00000036446 812 0.992 - - - - - - - - 0.992 protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
95. spag9a ENSDARG00000074531 1195 0.992 - - - - - - - - 0.992 sperm associated antigen 9a [Source:ZFIN;Acc:ZDB-GENE-070820-7]
96. mycla ENSDARG00000006003 1866 0.992 - - - - - - - - 0.992 MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
97. cap1 ENSDARG00000016350 891 0.991 - - - - - - - - 0.991 CAP, adenylate cyclase-associated protein 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-6459]
98. spsb1 ENSDARG00000056515, ENSDARG00000110015 788 0.991 - - - - - - - - 0.991 splA/ryanodine receptor domain and SOCS box containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6122]
99. BCL6B ENSDARG00000069335 602 0.991 - - - - - - - - 0.991 B-cell CLL/lymphoma 6, member B [Source:ZFIN;Acc:ZDB-GENE-120907-1]
100. rfx5 ENSDARG00000063258 806 0.991 - - - - - - - - 0.991 regulatory factor X, 5 [Source:ZFIN;Acc:ZDB-GENE-070717-3]

There are 1636 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA