Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-66k16.28

Gene Name Gene ID Reads Annotation
si:ch211-66k16.28 ENSDARG00000088423 80 si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]










Genes with expression patterns similar to si:ch211-66k16.28

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-66k16.28 ENSDARG00000088423 80 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-66k16.28 [Source:ZFIN;Acc:ZDB-GENE-120709-59]
2. xrra1 ENSDARG00000089578 18 1.916 - 0.916 - - - 1.000 - - - X-ray radiation resistance associated 1 [Source:ZFIN;Acc:ZDB-GENE-101216-2]
3. tnfsf10l4 ENSDARG00000058068, ENSDARG00000111545 136 1.915 0.975 0.940 - - - - - - - tumor necrosis factor (ligand) superfamily, member 10 like 4 [Source:ZFIN;Acc:ZDB-GENE-050227-6]
4. tmprss4b ENSDARG00000012860 6 1.883 - 0.981 - - - 0.902 - - - transmembrane serine protease 4b [Source:ZFIN;Acc:ZDB-GENE-030131-5862]
5. pou6f2 ENSDARG00000086362 135 1.865 - 0.981 - - - 0.884 - - - POU class 6 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-091118-71]
6. si:dkey-211g8.6 ENSDARG00000063088 19 1.865 - 0.981 - - - 0.884 - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
7. MAP4K2 ENSDARG00000001234 39 1.864 - 0.864 - - - 1.000 - - - mitogen-activated protein kinase kinase kinase kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030616-163]
8. zgc:162184 ENSDARG00000077217 47 1.863 0.975 - - - - 0.888 - - - zgc:162184 [Source:ZFIN;Acc:ZDB-GENE-070424-83]
9. LPHN3 LPHN3 195 1.855 0.963 0.892 - - - - - - -
10. FMN1_2 FMN1_2 305 1.851 0.956 0.895 - - - - - - -
11. crfb4 ENSDARG00000068711 51 1.804 - - 0.804 - - 1.000 - - - cytokine receptor family member b4 [Source:ZFIN;Acc:ZDB-GENE-070905-3]
12. btr16 ENSDARG00000028850 21 1.756 - 0.981 - - - - 0.775 - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
13. ARHGEF40 ENSDARG00000078979 25 1.746 - - - - - 1.000 - - 0.746 Rho guanine nucleotide exchange factor (GEF) 40 [Source:ZFIN;Acc:ZDB-GENE-110623-2]
14. si:dkey-260c8.4 si:dkey-260c8.4 106 1.738 0.897 0.841 - - - - - - -
15. atad1b ENSDARG00000056609 40 1.715 - - 0.715 - - 1.000 - - - ATPase family, AAA domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-030616-44]
16. ZNF784_4 ZNF784_4 113 1.685 0.963 0.722 - - - - - - -
17. ppp1r3da ENSDARG00000077513 109 1.67 - 0.933 0.737 - - - - - - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
18. RIBC2 ENSDARG00000075177 445 1.666 - 0.932 0.734 - - - - - - RIB43A domain with coiled-coils 2 [Source:ZFIN;Acc:ZDB-GENE-050411-27]
19. ptchd4 ENSDARG00000008249 17 1.658 - 0.899 - - - 0.759 - - - patched domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041001-178]
20. CDKN2AIP ENSDARG00000035853 341 1.641 0.737 0.904 - - - - - - - CDKN2A interacting protein [Source:ZFIN;Acc:ZDB-GENE-041010-188]
21. C7H19orf12_1 C7H19orf12_1 20 1.622 - - - - - 0.856 - - 0.766
22. si:dkey-205h13.2 ENSDARG00000089429 71 1.608 0.824 0.784 - - - - - - - si:dkey-205h13.2 [Source:ZFIN;Acc:ZDB-GENE-080225-18]
23. ppp6r2b ENSDARG00000069654 323 1.608 0.712 0.896 - - - - - - - protein phosphatase 6, regulatory subunit 2b [Source:ZFIN;Acc:ZDB-GENE-070705-441]
24. ugt5c2 ENSDARG00000006372 11 1.583 - - - - - 0.822 0.761 - - UDP glucuronosyltransferase 5 family, polypeptide C2 [Source:ZFIN;Acc:ZDB-GENE-060825-206]
25. asb3 ENSDARG00000005246 317 1.572 - 0.794 0.778 - - - - - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
26. C2H14orf119 C2H14orf119 716 1.548 0.808 0.740 - - - - - - -
27. aldh3a2a ENSDARG00000028259 591 1.543 0.837 0.706 - - - - - - - aldehyde dehydrogenase 3 family, member A2a [Source:ZFIN;Acc:ZDB-GENE-040718-74]
28. CABZ01085085.1 CABZ01085085.1 123 1.523 0.782 - - - - 0.741 - - -
29. TTF2 ENSDARG00000104105 564 1.496 0.703 - - - - 0.793 - - - transcription termination factor, RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-110411-73]
30. BX469922.1 BX469922.1 133 1.491 - 0.742 0.749 - - - - - -
31. CABZ01072534.1 CABZ01072534.1 69 1.475 0.732 - - - - - - - 0.743
32. fgf20b ENSDARG00000086070 13 1 - - - - - 1.000 - - - fibroblast growth factor 20b [Source:ZFIN;Acc:ZDB-GENE-060117-5]
33. si:ch211-113a14.29 48 1 - - - - - 1.000 - - - si:ch211-113a14.29
34. si:dkey-9i23.8 ENSDARG00000095407 1 1 - - - - - 1.000 - - - si:dkey-9i23.8 [Source:ZFIN;Acc:ZDB-GENE-090313-367]
35. taar14f ENSDARG00000088859, ENSDARG00000114926 1 1 - - - - - 1.000 - - - trace amine associated receptor 14f [Source:ZFIN;Acc:ZDB-GENE-041210-313]
36. ZNF512B ENSDARG00000071055 7 1 - - - - - 1.000 - - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
37. rhcgl1 ENSDARG00000007080, ENSDARG00000111618 28 1 - - - - - 1.000 - - - Rh family, C glycoprotein, like 1 [Source:ZFIN;Acc:ZDB-GENE-060209-2]
38. ctssa ctssa 24 1 - - - - - 1.000 - - -
39. STK31 ENSDARG00000056339 37 1 - - - - - 1.000 - - - serine/threonine kinase 31 [Source:ZFIN;Acc:ZDB-GENE-140106-59]
40. si:dkey-15h8.1 si:dkey-15h8.1 17 1 - - - - - 1.000 - - -
41. si:dkeyp-74a11.3 si:dkeyp-74a11.3 5 1 - - - - - 1.000 - - -
42. si:dkey-106c17.1 si:dkey-106c17.1 26 1 - - - - - 1.000 - - -
43. CU457778.1 ENSDARG00000098976 38 1 - - - - - 1.000 - - - uncharacterized LOC100535115 [Source:NCBI gene;Acc:100535115]
44. trip4 ENSDARG00000098074 79 1 - - - - - 1.000 - - - thyroid hormone receptor interactor 4 [Source:ZFIN;Acc:ZDB-GENE-040724-92]
45. BX004785.5 BX004785.5 35 1 - 1.000 - - - - - - -
46. si:ch211-102g22.3 si:ch211-102g22.3 2 1 - - - - - 1.000 - - -
47. si:ch211-260m19.8 si:ch211-260m19.8 33 1 - - - - - 1.000 - - -
48. neu3.2 ENSDARG00000010047, ENSDARG00000117176 68 1 - - - - - 1.000 - - - sialidase 3 (membrane sialidase), tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040801-262]
49. FP102191.1 FP102191.1 21 1 - - - - - 1.000 - - -
50. si:ch211-226h7.6 ENSDARG00000076196 1 1 - - - - - 1.000 - - - si:ch211-226h7.6 [Source:ZFIN;Acc:ZDB-GENE-130531-12]
51. tmem119a ENSDARG00000095259 1 1 - - - - - 1.000 - - - transmembrane protein 119a [Source:ZFIN;Acc:ZDB-GENE-060526-69]
52. si:dkeyp-41f9.3 ENSDARG00000075600 2 1 - - - - - 1.000 - - - si:dkeyp-41f9.3 [Source:ZFIN;Acc:ZDB-GENE-091118-56]
53. zgc:171759_6 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 15 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
54. abcc9 ENSDARG00000015985 20 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family C (CFTR/MRP), member 9 [Source:ZFIN;Acc:ZDB-GENE-050517-23]
55. ptprja ENSDARG00000033042 25 1 - 1.000 - - - - - - - protein tyrosine phosphatase, receptor type, J a [Source:ZFIN;Acc:ZDB-GENE-030131-8301]
56. cacna1bb ENSDARG00000079295, ENSDARG00000116562 1 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, N type, alpha 1B subunit, b [Source:ZFIN;Acc:ZDB-GENE-090514-4]
57. TRIM14_5 TRIM14_5 2 1 - - - - - 1.000 - - -
58. SPP2 ENSDARG00000095590 5 1 - - - - - 1.000 - - - secreted phosphoprotein 2 [Source:ZFIN;Acc:ZDB-GENE-090313-223]
59. unc13ba ENSDARG00000017391 1 1 - - - - - 1.000 - - - unc-13 homolog Ba (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-100921-10]
60. nitr7b_1 ENSDARG00000067977 1 1 - - - - - 1.000 - - - novel immune-type receptor 7b [Source:ZFIN;Acc:ZDB-GENE-041001-8]
61. TTC34 ENSDARG00000091221 3 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 34 [Source:ZFIN;Acc:ZDB-GENE-140106-266]
62. si:dkey-14o18.2 ENSDARG00000062995 1 1 - - - - - 1.000 - - - si:dkey-14o18.2 [Source:ZFIN;Acc:ZDB-GENE-060503-145]
63. grifin ENSDARG00000033382 141 1 - - - - - 1.000 - - - galectin-related inter-fiber protein [Source:ZFIN;Acc:ZDB-GENE-040801-163]
64. CABZ01102230.1 CABZ01102230.1 1 1 - - - - - 1.000 - - -
65. si:ch211-73m21.1 ENSDARG00000096491 10 1 - - - - - 1.000 - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
66. ZPLD1 ZPLD1 1 1 - - - - - 1.000 - - -
67. slc35c1 ENSDARG00000104669 65 1 - 1.000 - - - - - - - solute carrier family 35 (GDP-fucose transporter), member C1 [Source:ZFIN;Acc:ZDB-GENE-041212-11]
68. cd247l ENSDARG00000077240 25 1 - - - - - 1.000 - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
69. irg1 22 1 - - - - - 1.000 - - - immunoresponsive 1 homolog (mouse)
70. si:dkeyp-35e5.1 si:dkeyp-35e5.1 12 1 - - - - - 1.000 - - -
71. pdcl ENSDARG00000009480 12 1 - - - - - 1.000 - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
72. zgc:152857 ENSDARG00000041034 7 1 - - - - - 1.000 - - - zgc:152857 [Source:ZFIN;Acc:ZDB-GENE-060929-72]
73. atg9b ENSDARG00000055292 155 1 - - - - - 1.000 - - - autophagy related 9B [Source:ZFIN;Acc:ZDB-GENE-091111-3]
74. MCOLN2 ENSDARG00000098918 12 1 - - - - - 1.000 - - - mucolipin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-692]
75. cabp2a ENSDARG00000052016 19 1 - - - - - 1.000 - - - calcium binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050913-25]
76. ETS1 ENSDARG00000024431 6 1 - - - - - 1.000 - - - v-ets avian erythroblastosis virus E26 oncogene homolog 1 [Source:ZFIN;Acc:ZDB-GENE-021115-5]
77. BX323819.1 BX323819.1 9 1 - - - - - 1.000 - - -
78. si:dkeyp-87a6.2 ENSDARG00000093322 18 1 - - - - - 1.000 - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
79. si:ch73-222f22.2 ENSDARG00000094271, ENSDARG00000095763 18 1 - - - - - 1.000 - - - si:ch73-222f22.2 [Source:ZFIN;Acc:ZDB-GENE-100921-20]
80. si:dkey-71h2.4 si:dkey-71h2.4 6 1 - - - - - 1.000 - - -
81. rspo3 ENSDARG00000070081 4 1 - - - - - 1.000 - - - R-spondin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9814]
82. CU929449.1 CU929449.1 1 1 - - - - - 1.000 - - -
83. ENDOD1_6 ENDOD1_6 2 1 - - - - - 1.000 - - -
84. LRTM1 ENSDARG00000098742 21 1 - - - - - 1.000 - - - leucine rich repeats and transmembrane domains 1 [Source:ZFIN;Acc:ZDB-GENE-161221-2]
85. CABZ01071909.3 CABZ01071909.3 14 1 - - - - - 1.000 - - -
86. LRRC30 LRRC30 83 1 - - - - - 1.000 - - -
87. adra1bb ENSDARG00000041173, ENSDARG00000116032 5 1 - - - - - 1.000 - - - adrenoceptor alpha 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-51]
88. NUMA1 141 1 - - - - - 1.000 - - - nuclear mitotic apparatus protein 1, transcript variant X2
89. ucn3l ENSDARG00000087241 29 1 - - - - - 1.000 - - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
90. dao.2 ENSDARG00000035603 8 1 - - - - - 1.000 - - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
91. DNAJC11 1 1 - - - - - 1.000 - - - DnaJ heat shock protein family (Hsp40) member C11
92. sts ENSDARG00000053241 10 1 - - - - - 1.000 - - - steroid sulfatase (microsomal), isozyme S [Source:ZFIN;Acc:ZDB-GENE-030717-5]
93. U1_17 U1_17 1 1 - - - - - 1.000 - - -
94. si:ch211-30g3.6 si:ch211-30g3.6 1 1 - - - - - 1.000 - - -
95. ptger2a ENSDARG00000011434 6 1 - - - - - 1.000 - - - prostaglandin E receptor 2a (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040426-1321]
96. chpfb ENSDARG00000078037 30 1 - - - - - 1.000 - - - chondroitin polymerizing factor b [Source:ZFIN;Acc:ZDB-GENE-100504-1]
97. CDH24_1 CDH24_1 7 1 - - - - - 1.000 - - -
98. muc13b ENSDARG00000079647 67 1 - - - - - 1.000 - - - mucin 13b, cell surface associated [Source:ZFIN;Acc:ZDB-GENE-080220-61]
99. si:dkeyp-100a5.3 si:dkeyp-100a5.3 5 1 - - - - - 1.000 - - -
100. BX000363.2 ENSDARG00000109527 1 1 - - - - - 1.000 - - -

There are 1032 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA