Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-66k16.20

Gene Name Gene ID Reads Annotation
si:ch211-66k16.20 si:ch211-66k16.20 162










Genes with expression patterns similar to si:ch211-66k16.20

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-66k16.20 si:ch211-66k16.20 162 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. syn2a ENSDARG00000045945 434 1.684 0.825 0.859 - - - - - - - synapsin IIa [Source:ZFIN;Acc:ZDB-GENE-040718-341]
3. phpt1 ENSDARG00000045567 211 1.645 - 0.759 - - - - 0.886 - - phosphohistidine phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040801-85]
4. cdk10 ENSDARG00000034256 166 1.636 - 0.772 - - - - 0.864 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
5. cep72 ENSDARG00000105258 344 1.634 - - - - - 0.715 0.919 - - centrosomal protein 72 [Source:ZFIN;Acc:ZDB-GENE-101115-1]
6. hivep3b ENSDARG00000037154 114 1.614 - 0.752 - - - - 0.862 - - human immunodeficiency virus type I enhancer binding protein 3b [Source:ZFIN;Acc:ZDB-GENE-100922-42]
7. FRMPD1 34 1.614 0.829 - - - - 0.785 - - - FERM and PDZ domain containing 1, transcript variant X3
8. si:dkey-182i3.9 ENSDARG00000096575 56 1.585 - - - - 0.710 - 0.875 - - si:dkey-182i3.9 [Source:ZFIN;Acc:ZDB-GENE-121214-310]
9. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 1.569 0.796 - - - - 0.773 - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
10. tfr1a ENSDARG00000101322 105 1.567 - 0.768 - - - 0.799 - - - transferrin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-041220-1]
11. mettl6 ENSDARG00000070085 366 1.549 0.727 - - - - - 0.822 - - methyltransferase like 6 [Source:ZFIN;Acc:ZDB-GENE-040426-926]
12. ublcp1 ENSDARG00000044492, ENSDARG00000111451 888 1.549 0.782 - - - - - 0.767 - - ubiquitin-like domain containing CTD phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-3]
13. mtx1b ENSDARG00000036109 445 1.547 - 0.710 - - - - 0.837 - - metaxin 1b [Source:ZFIN;Acc:ZDB-GENE-021210-1]
14. smyhc2 ENSDARG00000099115, ENSDARG00000103969, ENSDARG00000111606 153 1.511 - 0.709 - - - 0.802 - - - slow myosin heavy chain 2 [Source:ZFIN;Acc:ZDB-GENE-070822-12]
15. mnx2b ENSDARG00000030350 484 1.499 0.784 - - - - 0.715 - - - motor neuron and pancreas homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-040415-2]
16. CCDC80 ENSDARG00000000002 413 1.499 - 0.732 - - - 0.767 - - - coiled-coil domain containing 80 [Source:ZFIN;Acc:ZDB-GENE-030616-56]
17. hoxb2a ENSDARG00000000175 1122 1.464 0.703 - - - - - 0.761 - - homeobox B2a [Source:ZFIN;Acc:ZDB-GENE-990415-103]
18. si:ch211-14c7.2 ENSDARG00000094522 369 1.427 - 0.706 - - - 0.721 - - - si:ch211-14c7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-856]
19. ap2m1b ENSDARG00000033899 317 0.95 - - - - - - 0.950 - - adaptor related protein complex 2 subunit mu 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1103]
20. BICD2 ENSDARG00000075571 401 0.94 - - - - - - 0.940 - - bicaudal D homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-120717-1]
21. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.935 - 0.935 - - - - - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
22. zgc:77151 ENSDARG00000054307 120 0.925 - - - - - - 0.925 - - zgc:77151 [Source:ZFIN;Acc:ZDB-GENE-030131-9097]
23. hsd17b7 ENSDARG00000088140 185 0.923 - - - - - - 0.923 - - hydroxysteroid (17-beta) dehydrogenase 7 [Source:ZFIN;Acc:ZDB-GENE-061013-378]
24. kirrelb 383 0.923 - - - - - - 0.923 - - kin of IRRE like b, transcript variant X3
25. adam19b ENSDARG00000067545 162 0.92 - - - - - - 0.920 - - ADAM metallopeptidase domain 19b [Source:ZFIN;Acc:ZDB-GENE-070705-541]
26. eltd1 eltd1 295 0.919 - - - - - - 0.919 - -
27. si:dkey-102c8.1 si:dkey-102c8.1 85 0.918 - - - - - - 0.918 - -
28. alx1 ENSDARG00000062824, ENSDARG00000110530, ENSDARG00000115230 243 0.917 - - - - - - 0.917 - - ALX homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-050419-191]
29. fam204a ENSDARG00000039699, ENSDARG00000114877 1178 0.915 - - - - - - 0.915 - - family with sequence similarity 204, member A [Source:ZFIN;Acc:ZDB-GENE-040718-271]
30. si:ch211-163b2.4 ENSDARG00000094890 140 0.914 - - - - - - 0.914 - - si:ch211-163b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-502]
31. thtpa ENSDARG00000063049 286 0.913 - - - - - - 0.913 - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
32. rnf19b ENSDARG00000060926 157 0.911 - - - - - - 0.911 - - ring finger protein 19B [Source:ZFIN;Acc:ZDB-GENE-060503-281]
33. WDSUB1 ENSDARG00000090418 357 0.911 - 0.911 - - - - - - - WD repeat, sterile alpha motif and U-box domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061110-97]
34. otud3 ENSDARG00000022648 263 0.905 - - - - - - 0.905 - - OTU deubiquitinase 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2509]
35. ppp1r1c ENSDARG00000038941 265 0.902 0.902 - - - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 1C [Source:ZFIN;Acc:ZDB-GENE-040718-273]
36. RFX7 885 0.9 - - - - - - 0.900 - - regulatory factor X, 7
37. si:ch211-162i8.5 ENSDARG00000111716 76 0.9 - - - - - - 0.900 - - si:ch211-162i8.5 [Source:ZFIN;Acc:ZDB-GENE-110914-30]
38. nudt15 ENSDARG00000113961 381 0.899 - - - - - 0.899 - - - nudix (nucleoside diphosphate linked moiety X)-type motif 15 [Source:ZFIN;Acc:ZDB-GENE-040625-95]
39. slc52a3 ENSDARG00000042737 67 0.899 - - - - - - 0.899 - - solute carrier family 52 (riboflavin transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-060421-4490]
40. abca4a ENSDARG00000057169 27 0.898 - - - - - - 0.898 - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
41. BX548021.2_1 BX548021.2_1 164 0.898 - - - - - - 0.898 - -
42. senp5 ENSDARG00000060646 303 0.898 - - - - - - 0.898 - - SUMO specific peptidase 5 [Source:ZFIN;Acc:ZDB-GENE-050208-772]
43. si:dkey-7l6.3 ENSDARG00000094514 146 0.898 - - - - - - 0.898 - - si:dkey-7l6.3 [Source:ZFIN;Acc:ZDB-GENE-070912-586]
44. BX465186.1 ENSDARG00000093047 28 0.898 - - - - - - 0.898 - -
45. PHF13 ENSDARG00000102023 1102 0.893 - - - - - - 0.893 - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
46. EVA1B EVA1B 22 0.892 - - - - - - 0.892 - -
47. si:ch211-238n5.4 ENSDARG00000062381, ENSDARG00000112239 286 0.892 - - - - - - 0.892 - - si:ch211-238n5.4 [Source:ZFIN;Acc:ZDB-GENE-050419-80]
48. lace1a lace1a 561 0.889 - - - - - - 0.889 - -
49. CT867948.2 CT867948.2 131 0.889 - - - - - - 0.889 - -
50. itga11a ENSDARG00000036086, ENSDARG00000111495 254 0.889 0.889 - - - - - - - - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
51. LIN9 ENSDARG00000028475 227 0.888 - - - - - - 0.888 - - lin-9 DREAM MuvB core complex component [Source:ZFIN;Acc:ZDB-GENE-030131-1747]
52. tmem187 ENSDARG00000051989 136 0.887 - - - - - - 0.887 - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
53. ENSDARG00000023499 ENSDARG00000023499 395 0.886 - - - - - - 0.886 - -
54. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.886 - - - - - - 0.886 - - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
55. mat2b ENSDARG00000012932 3146 0.886 - - - - - - 0.886 - - methionine adenosyltransferase II, beta [Source:ZFIN;Acc:ZDB-GENE-030131-786]
56. gnptg ENSDARG00000038566 259 0.886 - - - - - - 0.886 - - N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
57. BX324198.2 BX324198.2 84 0.886 - - - - - - 0.886 - -
58. fbxw2 ENSDARG00000009745 618 0.885 - - - - - - 0.885 - - F-box and WD repeat domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-050522-303]
59. mrps22 ENSDARG00000018073, ENSDARG00000115927 177 0.884 - - - - - - 0.884 - - mitochondrial ribosomal protein S22 [Source:ZFIN;Acc:ZDB-GENE-070615-31]
60. FAM188B FAM188B 145 0.883 - - - - - - 0.883 - -
61. glrbb ENSDARG00000052769, ENSDARG00000113828 467 0.882 0.882 - - - - - - - - glycine receptor, beta b [Source:ZFIN;Acc:ZDB-GENE-040801-106]
62. ITPK1 ITPK1 78 0.882 - - - - - - 0.882 - -
63. zgc:195282 ENSDARG00000079488 475 0.881 - - - - - - 0.881 - - zgc:195282 [Source:ZFIN;Acc:ZDB-GENE-081022-208]
64. otud4 ENSDARG00000077810 120 0.881 - - - - - - 0.881 - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
65. tbcela ENSDARG00000002682 1179 0.88 - - - - - - 0.880 - - tubulin folding cofactor E-like a [Source:ZFIN;Acc:ZDB-GENE-040426-1719]
66. 5_8S_rRNA_2 5_8S_rRNA_2 424 0.879 - - - - - - 0.879 - -
67. si:ch211-208h1.1 si:ch211-208h1.1 262 0.878 - - - - - - 0.878 - -
68. FP102801.1_1 FP102801.1_1 238 0.878 0.878 - - - - - - - -
69. fam129bb ENSDARG00000008026, ENSDARG00000111074 702 0.876 - - - - - - 0.876 - - family with sequence similarity 129, member Bb [Source:ZFIN;Acc:ZDB-GENE-030131-6218]
70. KCNV1 ENSDARG00000070092 301 0.876 - 0.876 - - - - - - - potassium voltage-gated channel modifier subfamily V member 1 [Source:HGNC Symbol;Acc:HGNC:18861]
71. slc2a1b ENSDARG00000007412 1028 0.874 - - - - - - 0.874 - - solute carrier family 2 (facilitated glucose transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-090915-1]
72. dmrta2 ENSDARG00000039412 328 0.874 - - - - - - 0.874 - - DMRT-like family A2 [Source:ZFIN;Acc:ZDB-GENE-041116-2]
73. CABZ01074946.1 CABZ01074946.1 119 0.873 - 0.873 - - - - - - -
74. SACM1L_1 SACM1L_1 750 0.872 - - - - - - 0.872 - -
75. LYAR ENSDARG00000098507 1506 0.872 - - - - - - 0.872 - - Ly1 antibody reactive homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-040426-1414]
76. myo3a ENSDARG00000010186 117 0.871 - - - - - - 0.871 - - myosin IIIA [Source:ZFIN;Acc:ZDB-GENE-041026-4]
77. knop1 ENSDARG00000077721 2198 0.87 - - - - - - 0.870 - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
78. spg20b 224 0.869 - - - - - - 0.869 - - spastic paraplegia 20b (Troyer syndrome)
79. CR407594.2 CR407594.2 145 0.869 - - - - - - 0.869 - -
80. si:ch211-106g4.2 si:ch211-106g4.2 6 0.868 - - - - - - 0.868 - -
81. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 0.868 - - - - - - 0.868 - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
82. DENND4B ENSDARG00000102914 1001 0.868 - - - - - - 0.868 - - DENN/MADD domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-130530-684]
83. si:ch211-38m6.6 ENSDARG00000076959 12 0.868 - - - - - - 0.868 - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
84. CABZ01058107.1 ENSDARG00000112826 8 0.868 - - - - - - 0.868 - - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
85. HIST2H4A HIST2H4A 33 0.868 - - - - - - 0.868 - -
86. KCNK7 ENSDARG00000057331 5 0.868 - - - - - - 0.868 - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
87. ftr56 ENSDARG00000030954 23 0.868 - - - - - - 0.868 - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
88. saga ENSDARG00000012610 63 0.868 - - - - - - 0.868 - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
89. mxtx1 ENSDARG00000069382 32 0.868 - - - - - - 0.868 - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
90. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.868 - - - - - - 0.868 - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
91. KBTBD13_1 KBTBD13_1 116 0.867 - - - - - 0.867 - - -
92. si:ch73-191k20.4 37 0.867 - - - - - - 0.867 - - si:ch73-191k20.4, transcript variant X1
93. alg2 ENSDARG00000070399 772 0.866 - - - - - - 0.866 - - asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060502-2]
94. otop2 ENSDARG00000006522 61 0.866 - - - - - 0.866 - - - otopetrin 2 [Source:ZFIN;Acc:ZDB-GENE-050104-2]
95. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 0.866 - - - - - - 0.866 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
96. slc16a9b ENSDARG00000104687 826 0.866 - - - - - - 0.866 - - solute carrier family 16, member 9b [Source:ZFIN;Acc:ZDB-GENE-040801-69]
97. tmem101 ENSDARG00000114508 494 0.865 - - - - - - 0.865 - - transmembrane protein 101 [Source:ZFIN;Acc:ZDB-GENE-121214-289]
98. gpn2 ENSDARG00000103127 304 0.865 - - - - - - 0.865 - - GPN-loop GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-86]
99. crtac1a ENSDARG00000059826 22 0.864 - - - - - - 0.864 - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
100. C9H2orf49 C9H2orf49 258 0.864 - 0.864 - - - - - - -

There are 663 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA