Zebrafish data search
Results for si:ch211-59m15.1
| Gene Name | Gene ID | Reads | Annotation |
|---|---|---|---|
| si:ch211-59m15.1 | 87 | si:ch211-59m15.1 |
Genes with expression patterns similar to si:ch211-59m15.1
| Nr. | Gene Name | Gene ID | Reads | Σ scores | 28hpf trunk1 | 28hpf trunk2 | 28hpf whole1 | 28hpf whole2 | 28hpf whole3 PA | 40hpf trunk1 | 40hpf trunk2 | 40hpf whole embryo1 | 40hpf whole embryo2 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | si:ch211-59m15.1 | 87 | 8 | - | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | si:ch211-59m15.1 | |
| 2. | taf1b | ENSDARG00000028937 | 879 | 2.615 | - | 0.727 | - | 0.975 | - | 0.913 | - | - | - | TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B [Source:ZFIN;Acc:ZDB-GENE-041008-2] |
| 3. | psmf1 | ENSDARG00000022652 | 527 | 2.488 | - | - | - | 0.911 | - | 0.807 | 0.770 | - | - | proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282] |
| 4. | crygm2d3 | ENSDARG00000088823 | 1560 | 1.951 | - | 0.968 | - | - | - | 0.983 | - | - | - | crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2] |
| 5. | eef1a1a | ENSDARG00000039502 | 234 | 1.902 | - | - | - | 0.984 | - | - | 0.918 | - | - | eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278] |
| 6. | si:dkey-242k1.4 | 136 | 1.849 | - | 0.950 | 0.899 | - | - | - | - | - | - | si:dkey-242k1.4 | |
| 7. | rapgef5a | ENSDARG00000075271 | 282 | 1.832 | - | - | - | 0.974 | - | 0.858 | - | - | - | Rap guanine nucleotide exchange factor (GEF) 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7681] |
| 8. | DIP2C | DIP2C | 222 | 1.83 | - | - | - | 0.982 | - | 0.848 | - | - | - | |
| 9. | si:dkeyp-82b4.2 | ENSDARG00000112648 | 14 | 1.801 | - | 0.855 | - | - | - | 0.946 | - | - | - | si:dkeyp-82b4.2 [Source:ZFIN;Acc:ZDB-GENE-060503-561] |
| 10. | tmprss13b | ENSDARG00000077573 | 47 | 1.768 | - | - | 0.833 | - | - | 0.935 | - | - | - | transmembrane serine protease 13b [Source:ZFIN;Acc:ZDB-GENE-090309-2] |
| 11. | si:ch211-190k17.19 | ENSDARG00000095756 | 19 | 1.763 | - | 0.855 | - | - | - | 0.908 | - | - | - | si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167] |
| 12. | nkx2.3 | ENSDARG00000039095, ENSDARG00000113490 | 493 | 1.727 | - | - | - | 0.945 | - | 0.782 | - | - | - | NK2 homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-990415-178] |
| 13. | LDLRAD4 | LDLRAD4 | 1237 | 1.711 | - | 0.831 | - | 0.880 | - | - | - | - | - | |
| 14. | si:ch211-176m18.1 | si:ch211-176m18.1 | 27 | 1.695 | - | - | - | - | - | 0.918 | 0.777 | - | - | |
| 15. | BX537137.1 | ENSDARG00000092436 | 77 | 1.695 | - | - | - | - | - | 0.992 | 0.703 | - | - | gastrula zinc finger protein XlCGF7.1 [Source:NCBI gene;Acc:100148466] |
| 16. | CU683901.1 | CU683901.1 | 187 | 1.694 | - | - | - | 0.974 | - | - | 0.720 | - | - | |
| 17. | BX005423.3 | BX005423.3 | 33 | 1.683 | - | 0.774 | - | - | - | 0.909 | - | - | - | |
| 18. | pus1 | ENSDARG00000045562 | 114 | 1.665 | - | 0.857 | - | - | - | - | 0.808 | - | - | pseudouridylate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-26] |
| 19. | si:dkey-5n7.2 | ENSDARG00000102339 | 42 | 1.657 | - | - | 0.804 | - | - | 0.853 | - | - | - | si:dkey-5n7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-254] |
| 20. | scyl3 | ENSDARG00000027046 | 643 | 1.653 | - | - | - | 0.857 | - | 0.796 | - | - | - | SCY1-like, kinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2559] |
| 21. | CU638738.1 | CU638738.1 | 131 | 1.647 | - | 0.799 | - | - | - | - | 0.848 | - | - | |
| 22. | pum2 | ENSDARG00000061040 | 207 | 1.644 | - | - | - | - | - | 0.862 | 0.782 | - | - | pumilio RNA-binding family member 2 [Source:ZFIN;Acc:ZDB-GENE-081031-76] |
| 23. | ENSDARG00000039608 | ENSDARG00000039608 | 23 | 1.633 | - | - | 0.856 | - | - | - | 0.777 | - | - | |
| 24. | SNCAIP | ENSDARG00000100198 | 522 | 1.623 | - | - | - | 0.863 | - | 0.760 | - | - | - | synuclein, alpha interacting protein [Source:ZFIN;Acc:ZDB-GENE-080204-71] |
| 25. | usp11 | ENSDARG00000076303 | 183 | 1.62 | - | 0.710 | - | - | - | 0.910 | - | - | - | ubiquitin specific peptidase 11 [Source:ZFIN;Acc:ZDB-GENE-081104-421] |
| 26. | adrb2a | ENSDARG00000088124 | 324 | 1.597 | - | 0.836 | - | - | - | 0.761 | - | - | - | adrenoceptor beta 2, surface a [Source:ZFIN;Acc:ZDB-GENE-100414-3] |
| 27. | CDK5RAP1 | ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 | 390 | 1.594 | - | 0.737 | - | 0.857 | - | - | - | - | - | CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90] |
| 28. | ythdf3 | ENSDARG00000057939 | 475 | 1.583 | - | - | - | 0.879 | - | 0.704 | - | - | - | YTH N(6)-methyladenosine RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6123] |
| 29. | FOCAD | ENSDARG00000022020 | 550 | 1.581 | - | 0.715 | - | 0.866 | - | - | - | - | - | focadhesin [Source:ZFIN;Acc:ZDB-GENE-080213-1] |
| 30. | lrata | ENSDARG00000037278, ENSDARG00000112503 | 1510 | 1.568 | - | - | - | 0.800 | - | 0.768 | - | - | - | lecithin retinol acyltransferase a [Source:ZFIN;Acc:ZDB-GENE-060720-1] |
| 31. | slc9a6b | ENSDARG00000075382 | 151 | 1.564 | - | 0.703 | - | - | - | 0.861 | - | - | - | solute carrier family 9, subfamily A (NHE6, cation proton antiporter 6), member 6b [Source:ZFIN;Acc:ZDB-GENE-080226-2] |
| 32. | CABZ01061146.1 | CABZ01061146.1 | 28 | 1.562 | - | - | 0.785 | - | - | - | 0.777 | - | - | |
| 33. | asap3 | ENSDARG00000021896 | 19 | 1.554 | - | 0.777 | - | - | - | - | 0.777 | - | - | ArfGAP with SH3 domain, ankyrin repeat and PH domain 3 [Source:ZFIN;Acc:ZDB-GENE-050913-39] |
| 34. | anapc1 | ENSDARG00000075687 | 488 | 1.547 | - | - | - | 0.799 | - | 0.748 | - | - | - | anaphase promoting complex subunit 1 [Source:ZFIN;Acc:ZDB-GENE-081107-12] |
| 35. | AL954696.1 | ENSDARG00000078442 | 768 | 1.536 | - | - | - | 0.747 | - | - | 0.789 | - | - | NOP9 nucleolar protein [Source:NCBI gene;Acc:100332577] |
| 36. | abcb6a | ENSDARG00000063297 | 264 | 1.529 | - | 0.729 | - | - | - | 0.800 | - | - | - | ATP-binding cassette, sub-family B (MDR/TAP), member 6a [Source:ZFIN;Acc:ZDB-GENE-050517-9] |
| 37. | si:dkey-189d19.2 | si:dkey-189d19.2 | 45 | 1.517 | - | - | 0.740 | - | - | - | 0.777 | - | - | |
| 38. | bmp6 | ENSDARG00000015686 | 211 | 1.507 | - | 0.723 | - | - | - | - | 0.784 | - | - | bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42] |
| 39. | eif2ak2 | ENSDARG00000068729 | 184 | 1.506 | - | 0.705 | - | - | - | 0.801 | - | - | - | eukaryotic translation initiation factor 2-alpha kinase 2 [Source:ZFIN;Acc:ZDB-GENE-080422-1] |
| 40. | MAPK8IP1_1 | MAPK8IP1_1 | 186 | 1.502 | - | 0.757 | - | - | - | - | 0.745 | - | - | |
| 41. | TENM3 | ENSDARG00000005479 | 39 | 1.502 | - | 0.725 | - | - | - | - | 0.777 | - | - | teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19] |
| 42. | fbxl3b | ENSDARG00000021882 | 58 | 1.48 | - | - | - | - | - | 0.703 | 0.777 | - | - | F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178] |
| 43. | SUOX | ENSDARG00000091574 | 122 | 1.473 | - | - | 0.753 | - | - | 0.720 | - | - | - | sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3] |
| 44. | BX511013.1 | ENSDARG00000112403 | 1018 | 1.45 | - | 0.703 | - | 0.747 | - | - | - | - | - | uncharacterized LOC103908633 [Source:NCBI gene;Acc:103908633] |
| 45. | dbx1b | ENSDARG00000001859, ENSDARG00000113468 | 810 | 1.437 | - | - | - | 0.715 | - | - | 0.722 | - | - | developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11] |
| 46. | spg21 | ENSDARG00000007760 | 409 | 1 | - | - | - | - | - | 1.000 | - | - | - | spastic paraplegia 21 (autosomal recessive, Mast syndrome) [Source:ZFIN;Acc:ZDB-GENE-040426-2722] |
| 47. | pibf1 | ENSDARG00000013006, ENSDARG00000015506 | 151 | 1 | - | - | - | - | - | 1.000 | - | - | - | progesterone immunomodulatory binding factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-94] |
| 48. | APOA4_2 | APOA4_2 | 61 | 1 | - | - | - | - | - | 1.000 | - | - | - | |
| 49. | rdh5 | ENSDARG00000008306 | 272 | 1 | - | - | - | - | - | 1.000 | - | - | - | retinol dehydrogenase 5 (11-cis/9-cis) [Source:ZFIN;Acc:ZDB-GENE-050208-411] |
| 50. | CABZ01066957.1 | CABZ01066957.1 | 161 | 1 | - | 1.000 | - | - | - | - | - | - | - | |
| 51. | si:ch73-280o22.2 | ENSDARG00000077072 | 67 | 0.998 | - | - | - | - | - | 0.998 | - | - | - | si:ch73-280o22.2 [Source:ZFIN;Acc:ZDB-GENE-141216-272] |
| 52. | gbp2 | ENSDARG00000038669 | 91 | 0.998 | - | - | - | - | - | 0.998 | - | - | - | guanylate binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-070912-618] |
| 53. | ZNF648 | ENSDARG00000104823 | 194 | 0.993 | - | - | - | - | - | 0.993 | - | - | - | zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149] |
| 54. | zgc:173705 | ENSDARG00000105137, ENSDARG00000114437 | 83 | 0.991 | - | - | - | 0.991 | - | - | - | - | - | zgc:173705 [Source:ZFIN;Acc:ZDB-GENE-080212-6] |
| 55. | si:ch1073-263o8.2 | ENSDARG00000090870 | 66 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362] |
| 56. | si:dkey-117i10.1 | ENSDARG00000062537 | 3 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | si:dkey-117i10.1 [Source:ZFIN;Acc:ZDB-GENE-091204-371] |
| 57. | si:dkey-201l21.4 | ENSDARG00000076398 | 5 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | si:dkey-201l21.4 [Source:ZFIN;Acc:ZDB-GENE-060531-98] |
| 58. | ppfia2 | ENSDARG00000013000 | 45 | 0.99 | - | - | - | 0.990 | - | - | - | - | - | protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7905] |
| 59. | myo10l3 | ENSDARG00000074143 | 49 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | myosin X-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-237] |
| 60. | chtopb | ENSDARG00000070430 | 29 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712] |
| 61. | CU104716.1 | ENSDARG00000109332 | 12 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 62. | BX664721.1 | ENSDARG00000051804 | 21 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 63. | CR848784.2 | ENSDARG00000111157 | 16 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 64. | si:dkey-263l8.2 | si:dkey-263l8.2 | 3 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 65. | si:ch73-103l1.2 | ENSDARG00000096505 | 17 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226] |
| 66. | CT025771.1 | ENSDARG00000117721 | 13 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 67. | suv39h1a | ENSDARG00000026799 | 18 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | suppressor of variegation 3-9 homolog 1a [Source:ZFIN;Acc:ZDB-GENE-040801-111] |
| 68. | ZBTB41 | ENSDARG00000054984 | 464 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | zinc finger and BTB domain containing 41 [Source:ZFIN;Acc:ZDB-GENE-130530-649] |
| 69. | tuba7l | ENSDARG00000104643 | 33 | 0.99 | - | - | - | 0.990 | - | - | - | - | - | tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78] |
| 70. | CU633486.1 | ENSDARG00000098008 | 3 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 71. | BX004816.2 | ENSDARG00000087012 | 3 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 72. | insl5a | ENSDARG00000070966, ENSDARG00000112563 | 45 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | insulin-like 5a [Source:ZFIN;Acc:ZDB-GENE-050310-4] |
| 73. | cfhl1 | ENSDARG00000105212, ENSDARG00000111582 | 35 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | complement factor H like 1 [Source:ZFIN;Acc:ZDB-GENE-050208-342] |
| 74. | tm7sf2 | ENSDARG00000032816, ENSDARG00000116444 | 70 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | transmembrane 7 superfamily member 2 [Source:ZFIN;Acc:ZDB-GENE-041212-19] |
| 75. | ptk6b | ENSDARG00000059956 | 44 | 0.99 | - | - | - | 0.990 | - | - | - | - | - | PTK6 protein tyrosine kinase 6b [Source:ZFIN;Acc:ZDB-GENE-060929-1150] |
| 76. | si:ch211-264f7.2 | si:ch211-264f7.2 | 2 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 77. | CABZ01057940.1 | CABZ01057940.1 | 4 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 78. | si:dkey-153n9.5 | si:dkey-153n9.5 | 20 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 79. | hephl1 | hephl1 | 20 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 80. | CABZ01073740.1 | CABZ01073740.1 | 27 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 81. | si:rp71-78h1.1 | si:rp71-78h1.1 | 2 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 82. | itk | ENSDARG00000017565, ENSDARG00000113497, ENSDARG00000114923 | 4 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | IL2 inducible T cell kinase [Source:ZFIN;Acc:ZDB-GENE-990415-261] |
| 83. | zgc:171452 | ENSDARG00000074069 | 6 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | zgc:171452 [Source:ZFIN;Acc:ZDB-GENE-071004-84] |
| 84. | BX322657.1 | ENSDARG00000102448 | 23 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 85. | slco1f3 | ENSDARG00000105691 | 6 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | solute carrier organic anion transporter family, member 1F3 [Source:ZFIN;Acc:ZDB-GENE-080212-5] |
| 86. | nobox | 5 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | NOBOX oogenesis homeobox | |
| 87. | BX571811.2 | ENSDARG00000105655 | 11 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 88. | GRAMD2_1 | GRAMD2_1 | 12 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 89. | U6_26 | U6_26 | 2 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 90. | nceh1b | nceh1b | 22 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 91. | GABRR3 | GABRR3 | 3 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 92. | CU639413.2 | CU639413.2 | 33 | 0.99 | - | - | - | 0.990 | - | - | - | - | - | |
| 93. | msxa | msxa | 263 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 94. | si:dkey-234l24.10 | si:dkey-234l24.10 | 2 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 95. | cd4 | cd4 | 4 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 96. | zgc:158580 | zgc:158580 | 2 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 97. | zgc:193682 | zgc:193682 | 15 | 0.99 | - | - | - | - | - | 0.990 | - | - | - | |
| 98. | SYNGAP1_1 | SYNGAP1_1 | 66 | 0.989 | - | - | - | 0.989 | - | - | - | - | - | |
| 99. | gnav1 | ENSDARG00000043006 | 305 | 0.989 | - | - | - | 0.989 | - | - | - | - | - | guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92] |
| 100. | HTRA4 | ENSDARG00000005943 | 77 | 0.989 | - | - | - | 0.989 | - | - | - | - | - | HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192] |
There are 1652 more genes with r >= 0.7
Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C.
Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA