Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-57m13.9

Gene Name Gene ID Reads Annotation
si:ch211-57m13.9 ENSDARG00000095884 10 si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]










Genes with expression patterns similar to si:ch211-57m13.9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-57m13.9 ENSDARG00000095884 10 7 1.000 1.000 1.000 - 1.000 - 1.000 1.000 1.000 si:ch211-57m13.9 [Source:ZFIN;Acc:ZDB-GENE-110411-61]
2. si:dkey-100n10.2 101 2.655 0.750 1.000 - - - - 0.905 - - si:dkey-100n10.2
3. JAKMIP1 ENSDARG00000076090 55 2.443 0.927 - - - 0.811 - 0.705 - - janus kinase and microtubule interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-110208-7]
4. PRR12 PRR12 38 2 - 1.000 - - - - 1.000 - -
5. BX005294.2 ENSDARG00000109361 3 2 - 1.000 - - - - 1.000 - -
6. sez6l ENSDARG00000100594 35 2 - 1.000 - - - - 1.000 - - seizure related 6 homolog (mouse)-like [Source:ZFIN;Acc:ZDB-GENE-091204-162]
7. prl ENSDARG00000037946 80 2 - 1.000 - - - - 1.000 - - prolactin [Source:ZFIN;Acc:ZDB-GENE-030513-1]
8. pcyox1 ENSDARG00000103052 20 2 - 1.000 - - - - 1.000 - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
9. kif20a ENSDARG00000044491 12 2 - 1.000 - - - - 1.000 - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
10. si:dkey-199m13.8 si:dkey-199m13.8 61 2 - 1.000 - - - - 1.000 - -
11. col8a1b ENSDARG00000003533 18 2 - 1.000 - - - - - - 1.000 collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
12. GADD45G_1 GADD45G_1 236 1.969 - 1.000 - - - - 0.969 - -
13. EXD1 ENSDARG00000098669 27 1.941 - 0.941 - - - - - - 1.000 exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
14. chrna6 ENSDARG00000055559 60 1.938 - 1.000 - - - - 0.938 - - cholinergic receptor, nicotinic, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-090312-91]
15. rag2 ENSDARG00000052121 15 1.911 - - - - - - 1.000 - 0.911 recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
16. galr1 galr1 9 1.891 - 1.000 - - - - 0.891 - -
17. gad1b ENSDARG00000027419 440 1.885 - 1.000 - - - - 0.885 - - glutamate decarboxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030909-3]
18. fam43b ENSDARG00000070222 92 1.88 0.880 1.000 - - - - - - - family with sequence similarity 43, member B [Source:ZFIN;Acc:ZDB-GENE-040912-11]
19. BX936443.2 BX936443.2 28 1.875 - 0.875 - - - - 1.000 - -
20. CR391967.1 CR391967.1 135 1.875 0.875 - - - - - 1.000 - -
21. si:dkey-258p11.1 si:dkey-258p11.1 48 1.854 0.854 - - - - - 1.000 - -
22. CABZ01021538.1 CABZ01021538.1 67 1.841 - 1.000 - - - - 0.841 - -
23. zgc:165409_1 ENSDARG00000091385 65 1.839 0.839 1.000 - - - - - - - zgc:165409 [Source:ZFIN;Acc:ZDB-GENE-070615-19]
24. GABRA3 ENSDARG00000090883 5 1.839 0.839 1.000 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
25. zfp64 ENSDARG00000061147 44 1.839 0.839 - - - - - 1.000 - - zinc finger protein 64 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-031118-80]
26. ANO8 ANO8 380 1.825 0.929 - - - - - 0.896 - -
27. vcam1 vcam1 243 1.814 - 1.000 - - - - 0.814 - -
28. si:dkey-3n22.9 ENSDARG00000096273 1 1.8 - 1.000 0.800 - - - - - - si:dkey-3n22.9 [Source:ZFIN;Acc:ZDB-GENE-120215-95]
29. lrrc18b ENSDARG00000076236 5 1.8 - 1.000 0.800 - - - - - - leucine rich repeat containing 18b [Source:ZFIN;Acc:ZDB-GENE-110315-1]
30. CABZ01015475.1 ENSDARG00000104841 6 1.8 - - 0.800 - - - 1.000 - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
31. TMEM100_1 TMEM100_1 44 1.787 0.839 - - - - - 0.948 - -
32. kcna1 kcna1 174 1.781 0.781 1.000 - - - - - - -
33. trim3a ENSDARG00000063711 44 1.776 0.776 - - - - - 1.000 - - tripartite motif containing 3a [Source:ZFIN;Acc:ZDB-GENE-080522-4]
34. TRAK1 212 1.767 0.922 - - - - - 0.845 - - trafficking protein, kinesin binding 1, transcript variant X6
35. st6gal1 ENSDARG00000044514 142 1.76 - 1.000 - - - - 0.760 - - ST6 beta-galactosamide alpha-2,6-sialyltranferase 1 [Source:ZFIN;Acc:ZDB-GENE-060322-3]
36. kif3cb ENSDARG00000079500 935 1.751 0.751 - - - - - 1.000 - - kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
37. si:ch211-113a14.18 ENSDARG00000051735 1253 1.747 0.747 - - - - - 1.000 - - si:ch211-113a14.18 [Source:ZFIN;Acc:ZDB-GENE-121214-116]
38. CR626874.1 ENSDARG00000100141 55 1.735 - 1.000 - - - - - - 0.735
39. BX247898.1 BX247898.1 75 1.732 - 0.875 - - - - 0.857 - -
40. si:dkeyp-10a3.2 18 1.731 - 1.000 - - - - - - 0.731 si:dkeyp-10a3.2
41. ctslb ENSDARG00000039173, ENSDARG00000074306 27150 1.726 - 1.000 - - - - 0.726 - - cathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
42. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 1.724 0.787 - - - - - 0.937 - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
43. KCNT2 ENSDARG00000075812 23 1.722 0.839 - - - 0.883 - - - - potassium channel, subfamily T, member 2 [Source:ZFIN;Acc:ZDB-GENE-130530-783]
44. zgc:100906 ENSDARG00000033599 344 1.718 0.950 - - - - - 0.768 - - zgc:100906 [Source:ZFIN;Acc:ZDB-GENE-040801-20]
45. LRFN4 LRFN4 59 1.718 - 1.000 - - - - 0.718 - -
46. glrba ENSDARG00000052782, ENSDARG00000117018 4 1.716 - 0.880 - - - - 0.836 - - glycine receptor, beta a [Source:ZFIN;Acc:ZDB-GENE-010410-2]
47. pcyt1ba ENSDARG00000058162 206 1.705 - 1.000 - - - - 0.705 - - phosphate cytidylyltransferase 1, choline, beta a [Source:ZFIN;Acc:ZDB-GENE-061220-4]
48. tceanc2 ENSDARG00000062919 32 1.697 0.839 - - - - - - - 0.858 transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
49. b3galnt2 ENSDARG00000046133 68 1.683 - 0.847 - - - - 0.836 - - beta-1,3-N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050522-358]
50. nlgn3a ENSDARG00000104786 91 1.681 - 0.740 - - - - 0.941 - - neuroligin 3a [Source:ZFIN;Acc:ZDB-GENE-071219-1]
51. xkr7 ENSDARG00000026333 18 1.675 - 0.875 0.800 - - - - - - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
52. TRIM46 TRIM46 73 1.675 0.839 - - - - - 0.836 - -
53. nlgn2b ENSDARG00000079251, ENSDARG00000111576 179 1.669 0.816 - - - - - 0.853 - - neuroligin 2b [Source:ZFIN;Acc:ZDB-GENE-090918-3]
54. fat3a ENSDARG00000033840 902 1.657 - 0.880 - - - - 0.777 - - FAT atypical cadherin 3a [Source:ZFIN;Acc:ZDB-GENE-060929-1254]
55. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 1.656 - 0.880 - - - - 0.776 - - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
56. cacng8b ENSDARG00000070626 176 1.649 0.855 0.794 - - - - - - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
57. shisa7 shisa7 181 1.634 - 0.756 - - - - 0.878 - -
58. si:ch73-91k6.8 si:ch73-91k6.8 37 1.626 0.776 - - - - - 0.850 - -
59. nhlh2 ENSDARG00000025495 1860 1.611 0.782 0.829 - - - - - - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
60. GABRG1 ENSDARG00000101995 201 1.589 0.866 - - - - - 0.723 - - gamma-aminobutyric acid type A receptor gamma1 subunit [Source:ZFIN;Acc:ZDB-GENE-141215-66]
61. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 1.588 - 0.826 - - - - 0.762 - - hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
62. rnf34b ENSDARG00000054036 121 1.577 - 0.720 - - 0.857 - - - - ring finger protein 34b [Source:ZFIN;Acc:ZDB-GENE-071004-31]
63. pdcl ENSDARG00000009480 12 1.573 0.839 0.734 - - - - - - - phosducin-like [Source:ZFIN;Acc:ZDB-GENE-030131-2365]
64. CR538726.1 ENSDARG00000097179 321 1.563 0.719 - - - - - 0.844 - -
65. SLC2A13 SLC2A13 74 1.562 0.839 - - - - - 0.723 - -
66. si:dkey-193i10.3 si:dkey-193i10.3 70 1.544 0.814 0.730 - - - - - - -
67. her13 ENSDARG00000007097 2000 1.54 - 0.729 - - - - 0.811 - - hairy-related 13 [Source:ZFIN;Acc:ZDB-GENE-050228-1]
68. map6 map6 70 1.519 0.751 - - - - - 0.768 - -
69. scn1ba ENSDARG00000060222, ENSDARG00000115181 76 1.485 - 0.710 - - 0.775 - - - - sodium channel, voltage-gated, type I, beta a [Source:ZFIN;Acc:ZDB-GENE-060503-604]
70. CABZ01028287.1 CABZ01028287.1 626 1.476 0.735 - - - - - 0.741 - -
71. LRFN5_1 LRFN5_1 96 1.459 0.725 - - - - - 0.734 - -
72. nrsn1 ENSDARG00000111235 123 1.458 0.703 - - - - - 0.755 - - neurensin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7491]
73. agbl4 ENSDARG00000068050, ENSDARG00000110838 201 1.451 0.719 - - - - - 0.732 - - ATP/GTP binding protein-like 4 [Source:ZFIN;Acc:ZDB-GENE-081104-437]
74. zgc:152698 32 1 - 1.000 - - - - - - - zgc:152698
75. CU459094.1 ENSDARG00000110517 17 1 - - - - - - 1.000 - - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
76. ERAP1 ERAP1 0 1 - 1.000 - - - - - - -
77. CABZ01079192.1 ENSDARG00000101629 23 1 - 1.000 - - - - - - - sucrase-isomaltase (alpha-glucosidase) [Source:NCBI gene;Acc:100148922]
78. msgn1 ENSDARG00000070546 188 1 - 1.000 - - - - - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
79. UHRF2_1 UHRF2_1 2 1 - 1.000 - - - - - - -
80. si:ch1073-525h16.1 si:ch1073-525h16.1 1 1 - - - - - - 1.000 - -
81. ptk2ba ENSDARG00000022841 19 1 - - - - - - 1.000 - - protein tyrosine kinase 2 beta, a [Source:ZFIN;Acc:ZDB-GENE-080207-1]
82. si:ch211-113a14.14_3 si:ch211-113a14.14_3 21 1 - - - - - - 1.000 - -
83. cldnd ENSDARG00000006580 17 1 - 1.000 - - - - - - - claudin d [Source:ZFIN;Acc:ZDB-GENE-010328-4]
84. Metazoa_SRP_27 Metazoa_SRP_27 2 1 - - - - - - - - 1.000
85. BX537120.1 ENSDARG00000109968 0 1 - 1.000 - - - - - - -
86. slc13a1 ENSDARG00000045638, ENSDARG00000114835 13 1 - 1.000 - - - - - - - solute carrier family 13 member 1 [Source:ZFIN;Acc:ZDB-GENE-031222-3]
87. pycr1 pycr1 1258 1 - 1.000 - - - - - - -
88. actl6b ENSDARG00000034107 9 1 - 1.000 - - - - - - - actin-like 6B [Source:ZFIN;Acc:ZDB-GENE-050522-191]
89. lcp2b ENSDARG00000036215 15 1 - 1.000 - - - - - - - lymphocyte cytosolic protein 2b [Source:ZFIN;Acc:ZDB-GENE-081107-21]
90. aatkb ENSDARG00000104442 392 1 - 1.000 - - - - - - - apoptosis-associated tyrosine kinase b [Source:ZFIN;Acc:ZDB-GENE-100812-6]
91. ANGEL1 ENSDARG00000077567 38 1 - - - - - - 1.000 - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
92. MFAP4_2 MFAP4_2 592 1 - 1.000 - - - - - - -
93. rnasekb ENSDARG00000104458 13 1 - - - - - - 1.000 - - ribonuclease, RNase K b [Source:ZFIN;Acc:ZDB-GENE-060825-160]
94. si:dkey-71h2.2 ENSDARG00000043394 11 1 - 1.000 - - - - - - - si:dkey-71h2.2 [Source:ZFIN;Acc:ZDB-GENE-041014-145]
95. si:ch211-277p15.1 2 1 - - - - - - 1.000 - - si:ch211-277p15.1, transcript variant X5
96. CIR1 ENSDARG00000099733 66 1 - 1.000 - - - - - - - corepressor interacting with RBPJ, 1 [Source:HGNC Symbol;Acc:HGNC:24217]
97. lhx5 ENSDARG00000057936 785 1 - 1.000 - - - - - - - LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
98. ZNF135_2 ZNF135_2 27 1 - 1.000 - - - - - - -
99. pcbp3 ENSDARG00000054378 74 1 - 1.000 - - - - - - - poly(rC) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-050522-157]
100. SNORD14 SNORD14 31 1 - - - - - - 1.000 - -

There are 1108 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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