Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-57m13.8

Gene Name Gene ID Reads Annotation
si:ch211-57m13.8 ENSDARG00000078271 1 si:ch211-57m13.8 [Source:ZFIN;Acc:ZDB-GENE-110411-238]










Genes with expression patterns similar to si:ch211-57m13.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-57m13.8 ENSDARG00000078271 1 2 - - - 1.000 1.000 - - - - si:ch211-57m13.8 [Source:ZFIN;Acc:ZDB-GENE-110411-238]
2. ca4b ENSDARG00000042293 5 1.907 - - - 1.000 0.907 - - - - carbonic anhydrase IV b [Source:ZFIN;Acc:ZDB-GENE-080815-5]
3. RNF224 RNF224 5 1.797 - - - 0.797 1.000 - - - -
4. tbx5a ENSDARG00000024894 9 1.723 - - - 0.864 0.859 - - - - T-box 5a [Source:ZFIN;Acc:ZDB-GENE-991124-7]
5. SNORA30 SNORA30 1 1 - - - - 1.000 - - - -
6. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - 1.000 - - - -
7. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - 1.000 - - - -
8. adrb1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - - - 1.000 - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
9. CABZ01078767.1 ENSDARG00000117816 10 1 - - - 1.000 - - - - -
10. wibg wibg 2 1 - - - 1.000 - - - - -
11. zgc:66432 zgc:66432 16 1 - - - - 1.000 - - - -
12. BX465203.2 BX465203.2 23 1 - - - - 1.000 - - - -
13. cyp2ad2 ENSDARG00000021172 2 1 - - - - 1.000 - - - - cytochrome P450, family 2, subfamily AD, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-020812-2]
14. GPR139 14 1 - - - 1.000 - - - - - G protein-coupled receptor 139, transcript variant X1
15. CABZ01024684.1 CABZ01024684.1 1 1 - - - 1.000 - - - - -
16. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - 1.000 - - - -
17. RBBP6_7 RBBP6_7 1 1 - - - 1.000 - - - - -
18. CABZ01076801.1 CABZ01076801.1 3 1 - - - 1.000 - - - - -
19. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - - 1.000 - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
20. FRMPD1_2 FRMPD1_2 2 1 - - - - 1.000 - - - -
21. ppapdc1a ppapdc1a 1 1 - - - - 1.000 - - - -
22. cpn1_1 ENSDARG00000005185, ENSDARG00000096728 2 1 - - - 1.000 - - - - - carboxypeptidase N, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9116]
23. si:ch211-197g15.5 si:ch211-197g15.5 10 1 - - - - 1.000 - - - -
24. HELZ2 ENSDARG00000012600 2 1 - - - - 1.000 - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
25. CABZ01072254.1 ENSDARG00000076111 4 1 - - - 1.000 - - - - - glucoside xylosyltransferase 1a [Source:NCBI gene;Acc:100333154]
26. TMEM255B 1 1 - - - - 1.000 - - - - transmembrane protein 255B
27. FMNL1 FMNL1 7 1 - - - - 1.000 - - - -
28. BX897747.3_1 BX897747.3_1 1 1 - - - - 1.000 - - - -
29. BRINP3 BRINP3 11 1 - - - 1.000 - - - - -
30. jak3 ENSDARG00000010252 11 1 - - - - 1.000 - - - - Janus kinase 3 (a protein tyrosine kinase, leukocyte) [Source:ZFIN;Acc:ZDB-GENE-070725-4]
31. AL773596.2 AL773596.2 2 1 - - - - 1.000 - - - -
32. npnt ENSDARG00000018721 19 1 - - - - 1.000 - - - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
33. ANKRD27 ENSDARG00000089207 3 1 - - - - 1.000 - - - - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
34. fmn1 ENSDARG00000011975 5 1 - - - 1.000 - - - - - formin 1 [Source:ZFIN;Acc:ZDB-GENE-041001-198]
35. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - 1.000 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
36. syt15 ENSDARG00000079926 8 1 - - - 1.000 - - - - - synaptotagmin XV [Source:ZFIN;Acc:ZDB-GENE-090527-2]
37. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - - - 1.000 - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
38. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - 1.000 - - - - - si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
39. ENDOD1_2 ENDOD1_2 2 1 - - - - 1.000 - - - -
40. kpna7 ENSDARG00000027169 1 1 - - - 1.000 - - - - - karyopherin alpha 7 (importin alpha 8) [Source:ZFIN;Acc:ZDB-GENE-040426-2023]
41. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - 1.000 - - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
42. pus7l ENSDARG00000069780 1 1 - - - 1.000 - - - - - pseudouridylate synthase 7, like [Source:ZFIN;Acc:ZDB-GENE-050419-188]
43. si:ch211-283e2.7 19 1 - - - - 1.000 - - - - si:ch211-283e2.7, transcript variant X2
44. npas4a ENSDARG00000055752 5 1 - - - - 1.000 - - - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
45. fstl3 ENSDARG00000025670 41 1 - - - - 1.000 - - - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
46. APOH APOH 2 1 - - - - 1.000 - - - -
47. nitr3b ENSDARG00000110886 1 1 - - - 1.000 - - - - - novel immune-type receptor 3b [Source:ZFIN;Acc:ZDB-GENE-001106-16]
48. si:ch211-114l13.12 ENSDARG00000088019 1 1 - - - 1.000 - - - - - si:ch211-114l13.12 [Source:ZFIN;Acc:ZDB-GENE-120215-211]
49. bpnt1 ENSDARG00000043684 78 1 - - - - 1.000 - - - - bisphosphate nucleotidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-46]
50. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - - - 1.000 - - - -
51. si:ch73-343l4.3 ENSDARG00000092502 1 1 - - - - 1.000 - - - - si:ch73-343l4.3 [Source:ZFIN;Acc:ZDB-GENE-090313-155]
52. ENSDARG00000078787 ENSDARG00000078787 97 1 - - - 1.000 - - - - -
53. zmat4b ENSDARG00000061419 7 1 - - - 1.000 - - - - - zinc finger, matrin-type 4b [Source:ZFIN;Acc:ZDB-GENE-091118-68]
54. ZNF70_6 ZNF70_6 15 1 - - - - 1.000 - - - -
55. MFAP4_8 MFAP4_8 1 1 - - - - 1.000 - - - -
56. CABZ01074647.1 CABZ01074647.1 1 1 - - - - 1.000 - - - -
57. jakmip2 ENSDARG00000053547 32 1 - - - 1.000 - - - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
58. zgc:172014 ENSDARG00000101775 3 1 - - - - 1.000 - - - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
59. si:rp71-1c10.8 ENSDARG00000096760 1 1 - - - 1.000 - - - - - si:rp71-1c10.8 [Source:ZFIN;Acc:ZDB-GENE-130603-20]
60. GPR82 GPR82 127 1 - - - - 1.000 - - - -
61. atm_1 ENSDARG00000002385 1 1 - - - - 1.000 - - - - ATM serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-040809-1]
62. CU855711.1 ENSDARG00000088643 6 1 - - - - 1.000 - - - - legumain-like [Source:NCBI gene;Acc:108191752]
63. crhr1 ENSDARG00000003989 5 1 - - - 1.000 - - - - - corticotropin releasing hormone receptor 1 [Source:ZFIN;Acc:ZDB-GENE-081231-1]
64. SEC14L5 SEC14L5 1 1 - - - 1.000 - - - - -
65. si:ch211-244h4.2 si:ch211-244h4.2 1 1 - - - - 1.000 - - - -
66. zgc:173737 ENSDARG00000058299 6 1 - - - 1.000 - - - - - zgc:173737 [Source:ZFIN;Acc:ZDB-GENE-071004-109]
67. si:ch73-343l4.6 ENSDARG00000025547, ENSDARG00000095127 1 1 - - - - 1.000 - - - - si:ch73-343l4.6 [Source:ZFIN;Acc:ZDB-GENE-090313-158]
68. CR384075.2 CR384075.2 1 1 - - - - 1.000 - - - -
69. KLHL28 ENSDARG00000101676 1 1 - - - 1.000 - - - - - kelch like family member 28 [Source:HGNC Symbol;Acc:HGNC:19741]
70. si:dkeyp-46h3.5 ENSDARG00000089515 1 1 - - - - 1.000 - - - - si:dkeyp-46h3.5 [Source:ZFIN;Acc:ZDB-GENE-060503-937]
71. PSMB11_1 PSMB11_1 2 1 - - - - 1.000 - - - -
72. CABZ01112215.2 CABZ01112215.2 11 1 - - - 1.000 - - - - -
73. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - - - 1.000 - - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
74. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - 1.000 - - - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
75. si:dkey-61f9.2 2 1 - - - - 1.000 - - - - si:dkey-61f9.2
76. SNORD18_2 SNORD18_2 7 1 - - - 1.000 - - - - -
77. CU459012.3 ENSDARG00000109688 1 1 - - - - 1.000 - - - -
78. BX663520.1 ENSDARG00000097950 4 1 - - - 1.000 - - - - -
79. si:dkey-200c24.1 si:dkey-200c24.1 7 1 - - - - 1.000 - - - -
80. CT573253.1 CT573253.1 4 1 - - - - 1.000 - - - -
81. c3b c3b 8 1 - - - 1.000 - - - - -
82. si:ch211-93g21.3 si:ch211-93g21.3 1 1 - - - - 1.000 - - - -
83. si:dkey-30g5.2 si:dkey-30g5.2 1 1 - - - - 1.000 - - - -
84. pla2g4a pla2g4a 7 1 - - - 1.000 - - - - -
85. GABRA2_1 ENSDARG00000113737 5 1 - - - - 1.000 - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
86. hs3st4 ENSDARG00000052648 6 1 - - - - 1.000 - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
87. si:ch211-66k16.24 si:ch211-66k16.24 1 1 - - - - 1.000 - - - -
88. BX005410.2 BX005410.2 44 1 - - - - 1.000 - - - -
89. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - 1.000 - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
90. cep41 ENSDARG00000038500, ENSDARG00000117114 4 1 - - - 1.000 - - - - - centrosomal protein 41 [Source:ZFIN;Acc:ZDB-GENE-040704-35]
91. CABZ01083815.1 ENSDARG00000105488 4 0.981 - - - - 0.981 - - - -
92. gpr55a ENSDARG00000043447 12 0.978 - - - - 0.978 - - - - G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
93. MUC5AC_2 MUC5AC_2 5 0.978 - - - - 0.978 - - - -
94. CABZ01079981.1 CABZ01079981.1 8 0.978 - - - - 0.978 - - - -
95. CHCHD5 ENSDARG00000091754 35 0.978 - - - - 0.978 - - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
96. mstnb ENSDARG00000069133 3 0.97 - - - - 0.970 - - - - myostatin b [Source:ZFIN;Acc:ZDB-GENE-990415-165]
97. arvcfa ENSDARG00000074329 53 0.966 - - - - 0.966 - - - - ARVCF, delta catenin family member a [Source:ZFIN;Acc:ZDB-GENE-091113-43]
98. casd1 ENSDARG00000023900 12 0.966 - - - - 0.966 - - - - CAS1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-329]
99. FP085391.3 FP085391.3 14 0.961 - - - 0.961 - - - - -
100. si:dkey-19j7.4 si:dkey-19j7.4 1 0.96 - - - - 0.960 - - - -

There are 127 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA