Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-56a11.2

Gene Name Gene ID Reads Annotation
si:ch211-56a11.2 ENSDARG00000093677 196 si:ch211-56a11.2 [Source:ZFIN;Acc:ZDB-GENE-091204-123]










Genes with expression patterns similar to si:ch211-56a11.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-56a11.2 ENSDARG00000093677 196 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-56a11.2 [Source:ZFIN;Acc:ZDB-GENE-091204-123]
2. sp5l ENSDARG00000115868 361 1.7 0.975 - - - - - - - 0.725 Sp5 transcription factor-like [Source:ZFIN;Acc:ZDB-GENE-030131-2981]
3. FP565458.1 FP565458.1 61 1.672 - 0.913 0.759 - - - - - -
4. SGSM1 SGSM1 254 1.665 0.818 0.847 - - - - - - -
5. si:ch211-110p13.9 ENSDARG00000093821 82 1.648 0.797 - - - - - 0.851 - - si:ch211-110p13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-9]
6. fam20c fam20c 603 1.629 - 0.911 - - - - 0.718 - -
7. KCNJ6 ENSDARG00000058985 71 1.622 - 0.847 - - - 0.775 - - - potassium voltage-gated channel subfamily J member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
8. nr0b1 ENSDARG00000056541 35 1.618 - 0.885 - - - - 0.733 - - nuclear receptor subfamily 0, group B, member 1 [Source:ZFIN;Acc:ZDB-GENE-070130-1]
9. epha4a ENSDARG00000054454 1501 1.604 - - - - - - 0.851 0.753 - eph receptor A4a [Source:ZFIN;Acc:ZDB-GENE-001207-7]
10. ltk ENSDARG00000042861, ENSDARG00000116109 76 1.576 - 0.847 - - - - 0.729 - - leukocyte receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030616-115]
11. calb2a ENSDARG00000041062, ENSDARG00000110220 459 1.574 0.727 0.847 - - - - - - - calbindin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1677]
12. cdk10 ENSDARG00000034256 166 1.571 0.715 - - - - - 0.856 - - cyclin-dependent kinase 10 [Source:ZFIN;Acc:ZDB-GENE-050417-94]
13. slc2a15b ENSDARG00000053269 899 1.569 0.722 0.847 - - - - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
14. CU695076.1 CU695076.1 7 1.563 - 0.847 - - - 0.716 - - -
15. vwc2 ENSDARG00000076495 22 1.552 - 0.847 - - - - - 0.705 - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
16. pnp4a ENSDARG00000057575 355 1.524 0.734 0.790 - - - - - - - purine nucleoside phosphorylase 4a [Source:ZFIN;Acc:ZDB-GENE-040625-83]
17. wipf2b ENSDARG00000006712 375 1.514 - - - - - 0.742 0.772 - - WAS/WASL interacting protein family, member 2b [Source:ZFIN;Acc:ZDB-GENE-040625-182]
18. BCL2 BCL2 122 1.49 0.786 0.704 - - - - - - -
19. chrnb3a ENSDARG00000052764, ENSDARG00000112769 139 1.457 0.706 0.751 - - - - - - - cholinergic receptor, nicotinic, beta polypeptide 3a [Source:ZFIN;Acc:ZDB-GENE-040108-1]
20. mks1 ENSDARG00000059657, ENSDARG00000112247 126 1.425 - - - - - 0.719 0.706 - - Meckel syndrome, type 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3813]
21. dmrt2b ENSDARG00000070013, ENSDARG00000114365, ENSDARG00000114967 57 1.408 - - - - - - - 0.702 0.706 doublesex and mab-3 related transcription factor 2b [Source:ZFIN;Acc:ZDB-GENE-080813-1]
22. jph3 ENSDARG00000102204 175 0.975 0.975 - - - - - - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
23. CU914780.1 ENSDARG00000114023 105 0.968 0.968 - - - - - - - -
24. si:dkey-253a1.2 si:dkey-253a1.2 52 0.968 0.968 - - - - - - - -
25. plekho1a ENSDARG00000061191 98 0.963 0.963 - - - - - - - - pleckstrin homology domain containing, family O member 1a [Source:ZFIN;Acc:ZDB-GENE-060503-433]
26. CT573433.2 CT573433.2 115 0.963 0.963 - - - - - - - -
27. nubpl ENSDARG00000054821 232 0.96 - 0.960 - - - - - - - nucleotide binding protein-like [Source:ZFIN;Acc:ZDB-GENE-040718-140]
28. SDR16C5 SDR16C5 34 0.934 - - - - - - 0.934 - -
29. zgc:109889 ENSDARG00000069600, ENSDARG00000113538 554 0.933 0.933 - - - - - - - - zgc:109889 [Source:ZFIN;Acc:ZDB-GENE-050522-547]
30. lrrc4.2 ENSDARG00000003020 235 0.932 - 0.932 - - - - - - - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
31. pdk3b ENSDARG00000099791 50 0.932 - 0.932 - - - - - - - pyruvate dehydrogenase kinase, isozyme 3b [Source:ZFIN;Acc:ZDB-GENE-070112-1892]
32. etaa1 ENSDARG00000074915 123 0.932 - 0.932 - - - - - - - ETAA1, ATR kinase activator [Source:ZFIN;Acc:ZDB-GENE-080204-12]
33. mnx2a ENSDARG00000042106 939 0.926 - 0.926 - - - - - - - motor neuron and pancreas homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-040415-1]
34. fam214b ENSDARG00000068650 134 0.924 - - - - - 0.924 - - - family with sequence similarity 214, member B [Source:ZFIN;Acc:ZDB-GENE-060526-330]
35. chrna5 ENSDARG00000003420 137 0.921 0.921 - - - - - - - - cholinergic receptor, nicotinic, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-050417-440]
36. plekhm2 ENSDARG00000078850 207 0.919 - - - - - - 0.919 - - pleckstrin homology domain containing, family M (with RUN domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081022-169]
37. habp2 ENSDARG00000057498 75 0.914 - - - - - - 0.914 - - hyaluronan binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4721]
38. si:dkey-97a13.9 si:dkey-97a13.9 169 0.913 - 0.913 - - - - - - -
39. FCHSD2 FCHSD2 35 0.909 - 0.909 - - - - - - -
40. CABZ01111926.1 CABZ01111926.1 249 0.909 - 0.909 - - - - - - -
41. ELL3 ELL3 226 0.909 - - - - - 0.909 - - -
42. tjap1 ENSDARG00000010681 457 0.908 - - - - - - 0.908 - - tight junction associated protein 1 (peripheral) [Source:ZFIN;Acc:ZDB-GENE-081107-47]
43. gas7a ENSDARG00000074443, ENSDARG00000111294 250 0.907 - - - - - - 0.907 - - growth arrest-specific 7a [Source:ZFIN;Acc:ZDB-GENE-130128-1]
44. si:dkey-106l3.7 ENSDARG00000093444 29 0.905 - - - - - - 0.905 - - si:dkey-106l3.7 [Source:ZFIN;Acc:ZDB-GENE-091204-216]
45. atp1b4 ENSDARG00000053262 1337 0.904 - 0.904 - - - - - - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
46. f3a ENSDARG00000099124, ENSDARG00000110910, ENSDARG00000116919 115 0.904 - - - - - - 0.904 - - coagulation factor IIIa [Source:ZFIN;Acc:ZDB-GENE-071119-5]
47. tmem187 ENSDARG00000051989 136 0.899 - - - - - - 0.899 - - transmembrane protein 187 [Source:ZFIN;Acc:ZDB-GENE-090313-366]
48. NTRK3 NTRK3 163 0.897 0.897 - - - - - - - -
49. pih1d2 ENSDARG00000014849 389 0.896 - 0.896 - - - - - - - PIH1 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-041212-54]
50. HDX ENSDARG00000079382 513 0.896 - 0.896 - - - - - - - highly divergent homeobox [Source:ZFIN;Acc:ZDB-GENE-140106-165]
51. zgc:64002_1 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 257 0.894 - - - - - - 0.894 - - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
52. fam184a ENSDARG00000014081 93 0.894 0.894 - - - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
53. CABZ01061567.1 CABZ01061567.1 295 0.891 - - - - - - 0.891 - -
54. ttll11 ENSDARG00000060374, ENSDARG00000113807 225 0.891 - - - - - - 0.891 - - tubulin tyrosine ligase-like family, member 11 [Source:ZFIN;Acc:ZDB-GENE-061013-747]
55. cherp ENSDARG00000021812 286 0.889 - - - - - - 0.889 - - calcium homeostasis endoplasmic reticulum protein [Source:ZFIN;Acc:ZDB-GENE-040407-1]
56. zgc:173577 ENSDARG00000098923 71 0.888 - 0.888 - - - - - - - zgc:173577 [Source:ZFIN;Acc:ZDB-GENE-071004-55]
57. crtac1a ENSDARG00000059826 22 0.887 - - - - - - 0.887 - - cartilage acidic protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9704]
58. dfnb31a 166 0.886 - 0.886 - - - - - - - deafness, autosomal recessive 31a, transcript variant X3
59. tnr ENSDARG00000020771 20 0.885 - 0.885 - - - - - - - tenascin R (restrictin, janusin) [Source:ZFIN;Acc:ZDB-GENE-030804-1]
60. KCTD5 KCTD5 109 0.885 - 0.885 - - - - - - -
61. scn1lab ENSDARG00000062744 155 0.885 - 0.885 - - - - - - - sodium channel, voltage-gated, type I like, alpha b [Source:ZFIN;Acc:ZDB-GENE-060906-1]
62. fam49a ENSDARG00000006672 939 0.885 - 0.885 - - - - - - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
63. npffr1l3 ENSDARG00000010712 18 0.885 - 0.885 - - - - - - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
64. RFFL_1 RFFL_1 157 0.885 - 0.885 - - - - - - -
65. pcp4l1 ENSDARG00000023181 117 0.885 - 0.885 - - - - - - - Purkinje cell protein 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040724-35]
66. elovl4b ENSDARG00000027495 107 0.885 - 0.885 - - - - - - - ELOVL fatty acid elongase 4b [Source:ZFIN;Acc:ZDB-GENE-030131-7672]
67. cnih3 ENSDARG00000014953 25 0.885 - 0.885 - - - - - - - cornichon family AMPA receptor auxiliary protein 3 [Source:ZFIN;Acc:ZDB-GENE-041001-180]
68. mir92a-1 20 0.885 - 0.885 - - - - - - - microRNA 92a-1
69. grnas ENSDARG00000091885 71 0.885 - 0.885 - - - - - - - granulin antisense [Source:ZFIN;Acc:ZDB-GENE-060104-1]
70. uts1 ENSDARG00000014927 35 0.885 - 0.885 - - - - - - - urotensin 1 [Source:ZFIN;Acc:ZDB-GENE-041014-348]
71. mettl21d mettl21d 94 0.885 - 0.885 - - - - - - -
72. CSMD1 CSMD1 15 0.885 - 0.885 - - - - - - -
73. phf20a ENSDARG00000002750 90 0.885 - 0.885 - - - - - - - PHD finger protein 20, a [Source:ZFIN;Acc:ZDB-GENE-070912-270]
74. APEH ENSDARG00000008703 73 0.885 - 0.885 - - - - - - - acylaminoacyl-peptide hydrolase [Source:ZFIN;Acc:ZDB-GENE-030131-9870]
75. FAM161A ENSDARG00000089742 41 0.885 - 0.885 - - - - - - - family with sequence similarity 161, member A [Source:ZFIN;Acc:ZDB-GENE-110310-1]
76. tdp2a ENSDARG00000069941 10 0.885 - 0.885 - - - - - - - tyrosyl-DNA phosphodiesterase 2a [Source:ZFIN;Acc:ZDB-GENE-110218-1]
77. mapre3a ENSDARG00000020231 100 0.885 - 0.885 - - - - - - - microtubule-associated protein, RP/EB family, member 3a [Source:ZFIN;Acc:ZDB-GENE-050913-88]
78. zgc:174224_2 ENSDARG00000093875 22 0.885 - 0.885 - - - - - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
79. SLC16A1 SLC16A1 37 0.885 - 0.885 - - - - - - -
80. si:ch211-168h21.3 10 0.885 - 0.885 - - - - - - - si:ch211-168h21.3
81. CR847511.1 CR847511.1 80 0.883 0.883 - - - - - - - -
82. RAB39B RAB39B 482 0.883 - 0.883 - - - - - - -
83. nmnat2 ENSDARG00000004580 370 0.883 - 0.883 - - - - - - - nicotinamide nucleotide adenylyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8201]
84. dlx2a ENSDARG00000079964 1253 0.883 - - - - - - 0.883 - - distal-less homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-212]
85. n6amt1 ENSDARG00000115421 1456 0.882 - - - - - - 0.882 - - N-6 adenine-specific DNA methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-206]
86. BX324198.2 BX324198.2 84 0.882 - - - - - - 0.882 - -
87. otud4 ENSDARG00000077810 120 0.881 - - - - - - 0.881 - - OTU deubiquitinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5338]
88. SNORA73_1 SNORA73_1 85 0.881 0.881 - - - - - - - -
89. rin1a ENSDARG00000079095 99 0.88 - - - - - - 0.880 - - Ras and Rab interactor 1a [Source:ZFIN;Acc:ZDB-GENE-091204-129]
90. ascl1a ENSDARG00000038386 1290 0.88 - 0.880 - - - - - - - achaete-scute family bHLH transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-980526-90]
91. CT867948.2 CT867948.2 131 0.879 - - - - - - 0.879 - -
92. si:ch73-103b9.2 ENSDARG00000092489 89 0.878 - 0.878 - - - - - - - si:ch73-103b9.2 [Source:ZFIN;Acc:ZDB-GENE-070705-199]
93. RUNDC3A RUNDC3A 204 0.876 0.876 - - - - - - - -
94. si:dkey-58f10.9 si:dkey-58f10.9 86 0.876 - 0.876 - - - - - - -
95. DGKE ENSDARG00000104793, ENSDARG00000113394, ENSDARG00000114662 45 0.875 - - - - - - 0.875 - - diacylglycerol kinase, epsilon [Source:ZFIN;Acc:ZDB-GENE-090512-7]
96. KCNK7 ENSDARG00000057331 5 0.874 - - - - - - 0.874 - - potassium channel, subfamily K, member 7 [Source:ZFIN;Acc:ZDB-GENE-110304-2]
97. ftr56 ENSDARG00000030954 23 0.874 - - - - - - 0.874 - - finTRIM family, member 56 [Source:ZFIN;Acc:ZDB-GENE-030131-2801]
98. HIST2H4A HIST2H4A 33 0.874 - - - - - - 0.874 - -
99. CABZ01058107.1 ENSDARG00000112826 8 0.874 - - - - - - 0.874 - - C-type lectin domain family 4 member M-like [Source:NCBI gene;Acc:110440085]
100. si:ch211-38m6.6 ENSDARG00000076959 12 0.874 - - - - - - 0.874 - - si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]

There are 972 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA