Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-51c14.1

Gene Name Gene ID Reads Annotation
si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]










Genes with expression patterns similar to si:ch211-51c14.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-51c14.1 ENSDARG00000054645, ENSDARG00000110953 2434 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-51c14.1 [Source:ZFIN;Acc:ZDB-GENE-120215-48]
2. BX321921.1 BX321921.1 525 2.473 - 0.754 - 0.773 - 0.946 - - -
3. trim55b ENSDARG00000058158 586 2.456 - - - - - 0.911 0.794 0.751 - tripartite motif containing 55b [Source:ZFIN;Acc:ZDB-GENE-060312-37]
4. btbd9 ENSDARG00000068983 356 2.4 - 0.733 - - - 0.909 0.758 - - BTB (POZ) domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040704-39]
5. thbs3a ENSDARG00000077641 631 2.393 0.717 - - - - 0.937 0.739 - - thrombospondin 3a [Source:ZFIN;Acc:ZDB-GENE-020708-3]
6. ptrhd1 ENSDARG00000016122 2705 2.349 - 0.714 - - - 0.866 0.769 - - peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
7. EHBP1L1 EHBP1L1 2500 2.328 0.737 0.710 - - - - 0.881 - -
8. gstm gstm 4064 2.327 0.713 - - - - 0.792 - - 0.822
9. aacs ENSDARG00000012468 1138 2.316 - 0.762 - 0.797 - - - 0.757 - acetoacetyl-CoA synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-903]
10. srpk3 ENSDARG00000005916 1546 2.301 0.768 - - - - 0.803 0.730 - - SRSF protein kinase 3 [Source:ZFIN;Acc:ZDB-GENE-101025-2]
11. ITGB1BP2 ENSDARG00000030176 2472 2.231 0.774 - - - - - 0.716 0.741 - integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
12. pgp ENSDARG00000029695, ENSDARG00000114512 829 2.199 - 0.753 - - - - 0.741 0.705 - phosphoglycolate phosphatase [Source:ZFIN;Acc:ZDB-GENE-030131-6240]
13. smim8 ENSDARG00000071040 622 1.91 - - - - - 0.940 - - 0.970 small integral membrane protein 8 [Source:ZFIN;Acc:ZDB-GENE-050522-423]
14. slc6a19b ENSDARG00000056719 140 1.886 - - - - - 0.913 - - 0.973 solute carrier family 6 (neutral amino acid transporter), member 19b [Source:ZFIN;Acc:ZDB-GENE-030131-4755]
15. slc12a9 ENSDARG00000060366 293 1.877 - - - - - 0.912 - - 0.965 solute carrier family 12, member 9 [Source:ZFIN;Acc:ZDB-GENE-050208-222]
16. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.837 - - - - - 0.944 0.893 - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
17. stk10 ENSDARG00000101894 1587 1.818 - - - - - 0.848 - - 0.970 serine/threonine kinase 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1136]
18. CACUL1 ENSDARG00000021885 691 1.802 - - - - - 0.846 - - 0.956 CDK2 associated cullin domain 1 [Source:ZFIN;Acc:ZDB-GENE-170113-2]
19. lamtor5 ENSDARG00000090194, ENSDARG00000115255 2539 1.796 - - - - - 0.863 - - 0.933 late endosomal/lysosomal adaptor, MAPK and MTOR activator 5 [Source:ZFIN;Acc:ZDB-GENE-110411-193]
20. zc3hc1 ENSDARG00000062651 1552 1.779 - 0.865 - - - 0.914 - - - zinc finger, C3HC-type containing 1 [Source:ZFIN;Acc:ZDB-GENE-061013-94]
21. cyth1a ENSDARG00000005159, ENSDARG00000076742 2796 1.757 - - - - - 0.815 - - 0.942 cytohesin 1a [Source:ZFIN;Acc:ZDB-GENE-030131-657]
22. SLC35A2 ENSDARG00000058990 289 1.755 - - - - - - - 0.782 0.973 solute carrier family 35 (UDP-galactose transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030616-62]
23. stxbp2 ENSDARG00000007603 1646 1.751 - - - - - 0.818 - - 0.933 syntaxin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2482]
24. tuft1b ENSDARG00000071010 909 1.749 - - - - - 0.854 - - 0.895 tuftelin 1b [Source:ZFIN;Acc:ZDB-GENE-060503-150]
25. prc1a ENSDARG00000100918 1746 1.739 - 0.771 - - - - - - 0.968 protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
26. THEM6_1 ENSDARG00000103914 469 1.732 - 0.806 - - - 0.926 - - - thioesterase superfamily member 6 [Source:HGNC Symbol;Acc:HGNC:29656]
27. CU929417.2 CU929417.2 94 1.73 - - - 0.816 - 0.914 - - -
28. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 1.725 - - - - - 0.900 - - 0.825 debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
29. eif4eb ENSDARG00000013274, ENSDARG00000114799 1262 1.724 - - - - - 0.914 0.810 - - eukaryotic translation initiation factor 4eb [Source:ZFIN;Acc:ZDB-GENE-041121-14]
30. prkra ENSDARG00000076718 606 1.724 - - - - - - - 0.759 0.965 protein kinase, interferon-inducible double stranded RNA dependent activator [Source:ZFIN;Acc:ZDB-GENE-050309-206]
31. TSPAN4 TSPAN4 941 1.724 - - - - - 0.911 - 0.813 -
32. ube2j1 ENSDARG00000033489 497 1.722 - 0.805 - - - 0.917 - - - ubiquitin-conjugating enzyme E2, J1 [Source:ZFIN;Acc:ZDB-GENE-040426-2853]
33. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 1.721 - - - - - - 0.783 - 0.938 limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
34. itgbl1 ENSDARG00000040985 705 1.718 - - - - - 0.896 - - 0.822 integrin, beta-like 1 [Source:ZFIN;Acc:ZDB-GENE-050522-410]
35. trim35-28 ENSDARG00000021021 1380 1.716 - - - 0.770 - - - - 0.946 tripartite motif containing 35-28 [Source:ZFIN;Acc:ZDB-GENE-071004-19]
36. BX649282.1 ENSDARG00000105704 347 1.714 - - - - - 0.952 0.762 - -
37. cldnb ENSDARG00000009544 6036 1.712 - - - - - 0.838 - - 0.874 claudin b [Source:ZFIN;Acc:ZDB-GENE-010328-2]
38. ZDHHC3 ZDHHC3 1208 1.707 - - - 0.742 - - - - 0.965
39. CABZ01112358.1 CABZ01112358.1 667 1.705 - - - 0.821 - 0.884 - - -
40. gorasp1 gorasp1 3075 1.694 - 0.741 - - - - - - 0.953
41. FBXO33 ENSDARG00000075400 1164 1.692 - - - - - - - 0.741 0.951 F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
42. pde4ba ENSDARG00000032868, ENSDARG00000110575 1024 1.691 - - - - - 0.763 - - 0.928 phosphodiesterase 4B, cAMP-specific a [Source:ZFIN;Acc:ZDB-GENE-030131-9570]
43. mrpl14 ENSDARG00000068886 1991 1.691 - - - - - - 0.754 - 0.937 mitochondrial ribosomal protein L14 [Source:ZFIN;Acc:ZDB-GENE-040426-1066]
44. itsn1 ENSDARG00000000086 684 1.687 - 0.744 - - - 0.943 - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
45. zbtb46 ENSDARG00000078191, ENSDARG00000113888 231 1.686 - - - - - 0.913 - 0.773 - zinc finger and BTB domain containing 46 [Source:ZFIN;Acc:ZDB-GENE-090313-352]
46. tprg1 ENSDARG00000056026, ENSDARG00000115269 382 1.682 - - - - - 0.918 - 0.764 - tumor protein p63 regulated 1 [Source:ZFIN;Acc:ZDB-GENE-070410-113]
47. nus1 ENSDARG00000027813 1417 1.681 - - - 0.756 - 0.925 - - - NUS1, dehydrodolichyl diphosphate synthase subunit [Source:ZFIN;Acc:ZDB-GENE-040718-48]
48. chrna1 ENSDARG00000009021 2931 1.681 0.828 - - - - - 0.853 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
49. NEURL2 ENSDARG00000062446, ENSDARG00000110488 483 1.681 0.745 - - - - 0.936 - - - neuralized E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-070410-31]
50. elovl7a ENSDARG00000069279, ENSDARG00000114975 1963 1.677 - - - - - 0.763 - - 0.914 ELOVL fatty acid elongase 7a [Source:ZFIN;Acc:ZDB-GENE-030131-6149]
51. gtf2e2 ENSDARG00000012672, ENSDARG00000109689, ENSDARG00000115211 1677 1.676 - 0.736 - - - 0.940 - - - general transcription factor IIE, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-030131-6794]
52. CR847496.2 ENSDARG00000116070 802 1.671 - - - - - 0.903 - 0.768 - platelet derived growth factor c [Source:NCBI gene;Acc:560564]
53. arhgef16 ENSDARG00000077114 759 1.671 - - - 0.815 - - - 0.856 - Rho guanine nucleotide exchange factor (GEF) 16 [Source:ZFIN;Acc:ZDB-GENE-081104-446]
54. rpz2 ENSDARG00000091215 765 1.669 - 0.748 - - - - - - 0.921 rapunzel 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9071]
55. elp3 ENSDARG00000042005 936 1.668 - - - - - 0.929 - 0.739 - elongator acetyltransferase complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050327-35]
56. cx43 ENSDARG00000041799 2212 1.664 - 0.774 - - - 0.890 - - - connexin 43 [Source:ZFIN;Acc:ZDB-GENE-991105-4]
57. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 1.663 0.807 - - - - - 0.856 - - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
58. si:dkey-82i20.2 ENSDARG00000095126, ENSDARG00000100509 155 1.663 - 0.732 - - - 0.931 - - - si:dkey-82i20.2 [Source:ZFIN;Acc:ZDB-GENE-110914-74]
59. tmem56a ENSDARG00000098451 776 1.653 - - - 0.839 - - 0.814 - - transmembrane protein 56a [Source:ZFIN;Acc:ZDB-GENE-090402-1]
60. aldh2.2 ENSDARG00000028087 303 1.652 - - - 0.814 - 0.838 - - - aldehyde dehydrogenase 2 family member, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-030326-5]
61. pbxip1a ENSDARG00000071015 4960 1.646 0.738 - - - - - 0.908 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
62. pnp5a ENSDARG00000078619 1461 1.644 - - - - - 0.747 - - 0.897 purine nucleoside phosphorylase 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2553]
63. cux1b ENSDARG00000043134 641 1.642 - 0.792 - - - 0.850 - - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
64. limch1a ENSDARG00000074275 2981 1.641 0.752 - - - - - 0.889 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
65. dctd ENSDARG00000036990 2168 1.639 - - - - - - - 0.708 0.931 dCMP deaminase [Source:ZFIN;Acc:ZDB-GENE-050417-116]
66. chrnd ENSDARG00000019342 2728 1.632 0.729 - - - - - 0.903 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
67. crk ENSDARG00000055635, ENSDARG00000109497, ENSDARG00000115801 5105 1.631 - - - - - 0.830 - - 0.801 v-crk avian sarcoma virus CT10 oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040801-148]
68. CR354540.2 ENSDARG00000117517 18452 1.63 0.775 - - - - - 0.855 - -
69. si:ch1073-95o12.1 si:ch1073-95o12.1 734 1.63 - 0.793 - - - 0.837 - - -
70. alpk3a ENSDARG00000078989 1992 1.627 - - - 0.744 - - 0.883 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
71. dbnla ENSDARG00000008170 2129 1.624 - - - - - 0.888 - 0.736 - drebrin-like a [Source:ZFIN;Acc:ZDB-GENE-040704-42]
72. adhfe1 ENSDARG00000053518 499 1.624 - 0.786 - - - 0.838 - - - alcohol dehydrogenase, iron containing, 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2070]
73. TESK1_1 TESK1_1 276 1.622 - - - - - 0.890 - 0.732 -
74. CACHD1 ENSDARG00000061590 1287 1.622 - - - - - 0.875 - 0.747 - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
75. eef2k ENSDARG00000035835 2906 1.622 - - - - - 0.766 0.856 - - eukaryotic elongation factor 2 kinase [Source:ZFIN;Acc:ZDB-GENE-020916-2]
76. sar1ab ENSDARG00000033320 3984 1.62 0.764 - - - - - 0.856 - - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
77. ppm1bb ENSDARG00000011496 10196 1.619 - - - - - 0.704 - - 0.915 protein phosphatase, Mg2+/Mn2+ dependent, 1Bb [Source:ZFIN;Acc:ZDB-GENE-041114-185]
78. phex ENSDARG00000062363 1413 1.618 - 0.812 - - - - 0.806 - - phosphate regulating endopeptidase homolog, X-linked [Source:ZFIN;Acc:ZDB-GENE-030103-2]
79. trdn ENSDARG00000041779 4283 1.618 0.793 - - - - - 0.825 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
80. si:dkey-181m9.5 si:dkey-181m9.5 1079 1.618 - - - - - 0.786 0.832 - -
81. fam173b ENSDARG00000033451 513 1.618 - 0.776 - - - - 0.842 - - family with sequence similarity 173, member B [Source:ZFIN;Acc:ZDB-GENE-041114-90]
82. U2_6 U2_6 1155 1.616 - 0.755 - - - 0.861 - - -
83. kcnj13 ENSDARG00000043443 700 1.616 - - - 0.785 - 0.831 - - - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
84. sh3bgr ENSDARG00000021633 3498 1.615 0.769 - - - - - 0.846 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
85. FAM210A FAM210A 437 1.615 - 0.816 - - - - 0.799 - -
86. tmed4 ENSDARG00000024954 3476 1.614 - - - - - 0.901 - - 0.713 transmembrane p24 trafficking protein 4 [Source:ZFIN;Acc:ZDB-GENE-040625-140]
87. trim55a ENSDARG00000029596 2858 1.613 0.797 - - - - - 0.816 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
88. BX294434.1 ENSDARG00000061272 6493 1.613 0.755 - - - - - 0.858 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
89. CR847510.1 CR847510.1 629 1.611 - - - 0.878 - - 0.733 - -
90. tfam ENSDARG00000063145 4524 1.61 - 0.726 - - - 0.884 - - - transcription factor A, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-061013-552]
91. ryr1b ENSDARG00000023797 5693 1.609 - - - 0.797 - - 0.812 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
92. cttnbp2 ENSDARG00000040991 1697 1.609 - - - - - - 0.801 0.808 - cortactin binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8134]
93. pxn_1 pxn_1 3991 1.609 - - - - - - - 0.766 0.843
94. CCK CCK 1826 1.608 - - - - - 0.897 0.711 - -
95. efemp2a ENSDARG00000094324 39261 1.606 0.749 - - - - - 0.857 - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
96. eng1b eng1b 2544 1.605 - - - - - - 0.722 - 0.883
97. TMPO TMPO 3264 1.604 0.756 - - - - - 0.848 - -
98. tmem203 ENSDARG00000104996 1182 1.604 - 0.752 - - - 0.852 - - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
99. PTPLA PTPLA 4044 1.603 0.773 - - - - - 0.830 - -
100. fitm1 ENSDARG00000056464 1759 1.6 0.786 - - - - - 0.814 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]

There are 2247 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA