Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-42i9.5

Gene Name Gene ID Reads Annotation
si:ch211-42i9.5 si:ch211-42i9.5 21










Genes with expression patterns similar to si:ch211-42i9.5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-42i9.5 si:ch211-42i9.5 21 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ZSWIM2 ENSDARG00000075700 8 1.94 1.000 - - 0.940 - - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
3. sorcs3b ENSDARG00000077349 72 1.922 1.000 - - - - 0.922 - - - sortilin related VPS10 domain containing receptor 3b [Source:ZFIN;Acc:ZDB-GENE-131121-455]
4. g6pcb ENSDARG00000014967 8 1.858 1.000 - - - - - 0.858 - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
5. CABZ01021435.3 CABZ01021435.3 5 1.849 1.000 - - - - 0.849 - - -
6. stx3a ENSDARG00000001880 69 1.815 1.000 - - - - - 0.815 - - syntaxin 3A [Source:ZFIN;Acc:ZDB-GENE-040426-1489]
7. lingo1b ENSDARG00000035899 86 1.803 - - - - - 1.000 - 0.803 - leucine rich repeat and Ig domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040912-136]
8. nub1 ENSDARG00000061417 33 1.789 0.841 - - - - - 0.948 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
9. PFKL PFKL 9 1.784 1.000 - - 0.784 - - - - -
10. dio2 ENSDARG00000094857 17 1.768 - - 0.976 - - - 0.792 - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
11. slc5a9 ENSDARG00000005518 16 1.762 1.000 - - - - 0.762 - - - solute carrier family 5 (sodium/sugar cotransporter), member 9 [Source:ZFIN;Acc:ZDB-GENE-080513-3]
12. PEG3_9 PEG3_9 3 1.756 - - 0.942 - - - - 0.814 -
13. cacnb3a ENSDARG00000001881, ENSDARG00000110795, ENSDARG00000113797 27 1.731 0.841 - - - - 0.890 - - - calcium channel, voltage-dependent, beta 3a [Source:ZFIN;Acc:ZDB-GENE-060221-2]
14. secisbp2 ENSDARG00000073892 79 1.729 0.988 - - - - 0.741 - - - SECIS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-263]
15. disp2 ENSDARG00000042846 53 1.72 - - - - - 0.830 0.890 - - dispatched homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030915-1]
16. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1.707 - - - - - 0.849 0.858 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
17. TNFRSF11B ENSDARG00000098377 98 1.704 1.000 - - - - 0.704 - - - tumor necrosis factor receptor superfamily, member 11b [Source:ZFIN;Acc:ZDB-GENE-081104-76]
18. CYP27A1_2 CYP27A1_2 5 1.703 - - - - - 0.845 0.858 - -
19. si:dkey-1h6.8 ENSDARG00000096703 45 1.675 - - - - - 0.801 0.874 - - si:dkey-1h6.8 [Source:ZFIN;Acc:ZDB-GENE-130603-8]
20. cdkl5 ENSDARG00000015240 68 1.673 0.887 - - - - 0.786 - - - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
21. si:dkey-286j17.3 si:dkey-286j17.3 8 1.672 - - - - - - 0.858 0.814 -
22. cabp2b ENSDARG00000052277 119 1.664 - - - - - 0.849 0.815 - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
23. BRSK2_2 BRSK2_2 3 1.663 - - - - - 0.849 - 0.814 -
24. btr16 ENSDARG00000028850 21 1.658 0.953 - - - - - 0.705 - - bloodthirsty-related gene family, member 16 [Source:ZFIN;Acc:ZDB-GENE-060929-1066]
25. rab11bb_1 ENSDARG00000090086 7 1.651 0.802 - - - - 0.849 - - - RAB11B, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-040718-293]
26. map3k19 ENSDARG00000094272 59 1.643 0.880 - 0.763 - - - - - - mitogen-activated protein kinase kinase kinase 19 [Source:ZFIN;Acc:ZDB-GENE-081104-140]
27. snx21 ENSDARG00000062770, ENSDARG00000111065 9 1.64 - - 0.791 - - 0.849 - - - sorting nexin family member 21 [Source:ZFIN;Acc:ZDB-GENE-061013-557]
28. slc9a3.2 ENSDARG00000036722 31 1.632 - - - 0.784 - - 0.848 - - solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060503-640]
29. TENM2 ENSDARG00000037122 48 1.632 - - - - - 0.849 - 0.783 - teneurin transmembrane protein 2 [Source:HGNC Symbol;Acc:HGNC:29943]
30. trhra ENSDARG00000076546 3 1.612 - - 0.763 - - 0.849 - - - thyrotropin-releasing hormone receptor a [Source:ZFIN;Acc:ZDB-GENE-100922-18]
31. fam155b ENSDARG00000060152, ENSDARG00000114398 221 1.611 - - - - - 0.828 0.783 - - family with sequence similarity 155, member B [Source:ZFIN;Acc:ZDB-GENE-060526-303]
32. pcdh10b ENSDARG00000102824 732 1.602 - - - - - 0.718 0.884 - - protocadherin 10b [Source:ZFIN;Acc:ZDB-GENE-030721-4]
33. zgc:92630 ENSDARG00000004141, ENSDARG00000113420 147 1.596 - - - - - 0.849 0.747 - - zgc:92630 [Source:ZFIN;Acc:ZDB-GENE-040718-449]
34. DPEP3 DPEP3 53 1.587 - - - - - - 0.773 0.814 -
35. cldn15a ENSDARG00000112049 264 1.583 0.719 - - - - - 0.864 - - claudin 15a [Source:ZFIN;Acc:ZDB-GENE-040426-1305]
36. PLEKHS1_2 PLEKHS1_2 21 1.583 - - 0.725 - - - 0.858 - -
37. rapgef5b ENSDARG00000074307 112 1.582 0.786 - - - - 0.796 - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
38. CLNK 8 1.577 - - 0.719 - - - 0.858 - - cytokine dependent hematopoietic cell linker
39. akt3a_1 ENSDARG00000104810 12 1.576 - - - - - 0.849 - - 0.727 v-akt murine thymoma viral oncogene homolog 3a [Source:ZFIN;Acc:ZDB-GENE-050419-180]
40. fank1 ENSDARG00000039657 9 1.562 - - - 0.784 - - 0.778 - - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
41. vcpip1 ENSDARG00000060177 56 1.559 0.802 - 0.757 - - - - - - valosin containing protein (p97)/p47 complex interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-070912-613]
42. zbtb20 ENSDARG00000005586 195 1.527 - - - - - 0.740 0.787 - - zinc finger and BTB domain containing 20 [Source:ZFIN;Acc:ZDB-GENE-070112-1992]
43. gdf10a ENSDARG00000095378 12 1.51 - - - 0.784 - 0.726 - - - growth differentiation factor 10a [Source:ZFIN;Acc:ZDB-GENE-090312-17]
44. paqr7a ENSDARG00000100462 15 1.5 - - 0.725 - - - 0.775 - - progestin and adipoQ receptor family member VII, a [Source:ZFIN;Acc:ZDB-GENE-070705-346]
45. TSPAN1 ENSDARG00000052027 4 1.497 - - 0.763 - - - - 0.734 - tetraspanin 1 [Source:ZFIN;Acc:ZDB-GENE-070502-5]
46. ensaa ENSDARG00000036944 685 1.48 - - - - - 0.725 0.755 - - endosulfine alpha a [Source:ZFIN;Acc:ZDB-GENE-060503-181]
47. ppp1r18 ENSDARG00000071251 31 1.453 0.741 - - 0.712 - - - - - protein phosphatase 1, regulatory subunit 18 [Source:ZFIN;Acc:ZDB-GENE-060503-350]
48. hrh3 ENSDARG00000035942 32 1 1.000 - - - - - - - - histamine receptor H3 [Source:ZFIN;Acc:ZDB-GENE-040724-204]
49. ift81 ENSDARG00000007444 97 1 1.000 - - - - - - - - intraflagellar transport 81 homolog [Source:ZFIN;Acc:ZDB-GENE-040714-3]
50. ogfrl1 ENSDARG00000061223 64 1 - - - - - 1.000 - - - opioid growth factor receptor-like 1 [Source:ZFIN;Acc:ZDB-GENE-061207-32]
51. FAM124B ENSDARG00000087489 16 1 1.000 - - - - - - - - family with sequence similarity 124B [Source:ZFIN;Acc:ZDB-GENE-130327-1]
52. si:dkey-85k15.4 ENSDARG00000095047 25 1 1.000 - - - - - - - - si:dkey-85k15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-242]
53. guca1c ENSDARG00000030758 9 1 1.000 - - - - - - - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
54. CU570684.5 CU570684.5 55 1 1.000 - - - - - - - -
55. esyt1b ENSDARG00000014239 8 1 1.000 - - - - - - - - extended synaptotagmin-like protein 1b [Source:ZFIN;Acc:ZDB-GENE-040724-209]
56. zgc:174224_2 ENSDARG00000093875 22 1 - - - - - 1.000 - - - zgc:174224 [Source:ZFIN;Acc:ZDB-GENE-071004-118]
57. ENSDARG00000037617 ENSDARG00000037617 1 1 1.000 - - - - - - - -
58. CABZ01057633.1 CABZ01057633.1 39 1 1.000 - - - - - - - -
59. ccdc24 ENSDARG00000038793 7 1 - - - - - 1.000 - - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
60. crybb1 ENSDARG00000068507 2255 1 1.000 - - - - - - - - crystallin, beta B1 [Source:ZFIN;Acc:ZDB-GENE-010813-1]
61. U1_48 U1_48 1 1 1.000 - - - - - - - -
62. BX927308.3 BX927308.3 126 1 1.000 - - - - - - - -
63. akap10 ENSDARG00000059549 1 1 1.000 - - - - - - - - A kinase (PRKA) anchor protein 10 [Source:ZFIN;Acc:ZDB-GENE-030131-2535]
64. ppm1na ENSDARG00000010231 3 1 1.000 - - - - - - - - protein phosphatase, Mg2+/Mn2+ dependent, 1Na (putative) [Source:ZFIN;Acc:ZDB-GENE-040426-2731]
65. GPR137B GPR137B 50 1 - - - - - 1.000 - - -
66. BX005294.4 BX005294.4 8 1 1.000 - - - - - - - -
67. lcp1 ENSDARG00000023188 298 1 1.000 - - - - - - - - lymphocyte cytosolic protein 1 (L-plastin) [Source:ZFIN;Acc:ZDB-GENE-991213-5]
68. ccdc37 ccdc37 36 1 1.000 - - - - - - - -
69. ncaldb ENSDARG00000011334 123 1 1.000 - - - - - - - - neurocalcin delta b [Source:ZFIN;Acc:ZDB-GENE-040808-37]
70. TRIM35_12 TRIM35_12 2 1 1.000 - - - - - - - -
71. ifitm5 ENSDARG00000105153 132 1 1.000 - - - - - - - - interferon induced transmembrane protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-8970]
72. CIT_1 CIT_1 6 1 1.000 - - - - - - - -
73. FP102801.1 FP102801.1 294 1 1.000 - - - - - - - -
74. cd74a ENSDARG00000009087 20 1 1.000 - - - - - - - - CD74 molecule, major histocompatibility complex, class II invariant chain a [Source:ZFIN;Acc:ZDB-GENE-000901-1]
75. BX005421.6 BX005421.6 4 1 1.000 - - - - - - - -
76. C6H22orf23 C6H22orf23 15 1 1.000 - - - - - - - -
77. ENSDARG00000089062 ENSDARG00000089062 7 1 1.000 - - - - - - - -
78. ntng1a ENSDARG00000014973 23 1 - - - - - 1.000 - - - netrin g1a [Source:ZFIN;Acc:ZDB-GENE-091118-13]
79. zgc:113295_2 ENSDARG00000074768, ENSDARG00000103947 4 1 1.000 - - - - - - - - zgc:113295 [Source:ZFIN;Acc:ZDB-GENE-050320-122]
80. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 1 1.000 - - - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
81. ankdd1b ENSDARG00000025866 51 1 1.000 - - - - - - - - ankyrin repeat and death domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-060526-136]
82. si:dkey-101d6.4 si:dkey-101d6.4 6 1 1.000 - - - - - - - -
83. dnd dnd 33 1 1.000 - - - - - - - -
84. nisch ENSDARG00000043077 11 1 1.000 - - - - - - - - nischarin [Source:ZFIN;Acc:ZDB-GENE-050208-570]
85. pou2f2b pou2f2b 134 1 1.000 - - - - - - - -
86. si:dkey-258f14.3 ENSDARG00000075974 9 1 1.000 - - - - - - - - si:dkey-258f14.3 [Source:ZFIN;Acc:ZDB-GENE-050809-43]
87. PKHD1L1 ENSDARG00000091116 39 1 1.000 - - - - - - - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
88. si:ch73-386o14.1 si:ch73-386o14.1 82 1 1.000 - - - - - - - -
89. bicd1a ENSDARG00000079496 2 1 1.000 - - - - - - - - bicaudal D homolog 1a [Source:ZFIN;Acc:ZDB-GENE-081031-9]
90. CAMKV CAMKV 11 1 1.000 - - - - - - - -
91. si:dkey-42i9.8 ENSDARG00000071541 17 1 1.000 - - - - - - - - si:dkey-42i9.8 [Source:ZFIN;Acc:ZDB-GENE-050208-412]
92. CR933820.2 CR933820.2 152 1 1.000 - - - - - - - -
93. FBXL21 FBXL21 6 1 1.000 - - - - - - - -
94. shox ENSDARG00000025891 338 1 1.000 - - - - - - - - short stature homeobox [Source:ZFIN;Acc:ZDB-GENE-051030-21]
95. si:dkey-211g8.6 ENSDARG00000063088 19 1 1.000 - - - - - - - - si:dkey-211g8.6 [Source:ZFIN;Acc:ZDB-GENE-060503-813]
96. si:ch73-239k17.1 si:ch73-239k17.1 44 1 - - - - - 1.000 - - -
97. CU302326.3_1 CU302326.3_1 1 1 - - - - - 1.000 - - -
98. slc4a11 ENSDARG00000075532, ENSDARG00000115789 20 1 1.000 - - - - - - - - solute carrier family 4, sodium borate transporter, member 11 [Source:ZFIN;Acc:ZDB-GENE-090313-183]
99. stk16 ENSDARG00000037777 255 1 - - - - - 1.000 - - - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
100. CABZ01084942.1 ENSDARG00000100332 69 1 - - - - - 1.000 - - -

There are 1144 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA