Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-42i9.4

Gene Name Gene ID Reads Annotation
si:ch211-42i9.4 si:ch211-42i9.4 1448










Genes with expression patterns similar to si:ch211-42i9.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-42i9.4 si:ch211-42i9.4 1448 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. clic1 ENSDARG00000103340 2235 1.934 0.958 - 0.976 - - - - - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
3. wnt10a ENSDARG00000017155 491 1.919 0.944 - 0.975 - - - - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
4. TSSC4 ENSDARG00000036144 1994 1.847 0.900 - 0.947 - - - - - - tumor suppressing subtransferable candidate 4 [Source:ZFIN;Acc:ZDB-GENE-060825-263]
5. zgc:56585 ENSDARG00000026236 704 1.825 0.854 - 0.971 - - - - - - zgc:56585 [Source:ZFIN;Acc:ZDB-GENE-040426-1084]
6. bcl2l10 ENSDARG00000026766 1426 1.8 0.831 - 0.969 - - - - - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
7. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.76 0.777 - 0.983 - - - - - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
8. ktn1 ENSDARG00000032802 6251 1.736 0.844 - 0.892 - - - - - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
9. hint3 ENSDARG00000074286 1015 1.73 - - 0.967 - - - 0.763 - - histidine triad nucleotide binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-100922-168]
10. TIFA TIFA 1519 1.702 - - 0.972 - 0.730 - - - -
11. hdac4 ENSDARG00000098349 1370 1.673 - - 0.971 0.702 - - - - - histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
12. RNF5 ENSDARG00000075606 1730 1.66 0.935 0.725 - - - - - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
13. pdap1b ENSDARG00000002967 2159 1.643 0.743 - 0.900 - - - - - - pdgfa associated protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-942]
14. nop2 ENSDARG00000043304 2511 1.617 - - 0.914 - - 0.703 - - - NOP2 nucleolar protein homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-050309-7]
15. psmb2 ENSDARG00000031511 4016 1.613 0.764 - 0.849 - - - - - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
16. efemp2a ENSDARG00000094324 39261 1.568 - - - 0.772 0.796 - - - - EGF containing fibulin extracellular matrix protein 2a [Source:ZFIN;Acc:ZDB-GENE-041212-8]
17. hoxc12a ENSDARG00000070352 7409 1.545 - - - 0.829 0.716 - - - - homeobox C12a [Source:ZFIN;Acc:ZDB-GENE-000822-6]
18. vta1 ENSDARG00000013732 6072 1.518 0.816 0.702 - - - - - - - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
19. prcp ENSDARG00000037883 473 1.482 - - - - - 0.753 0.729 - - prolylcarboxypeptidase (angiotensinase C) [Source:ZFIN;Acc:ZDB-GENE-040718-447]
20. EML4_1 EML4_1 8736 1.43 0.708 0.722 - - - - - - -
21. ttc22 ENSDARG00000077836 21 1.426 - - - - 0.724 - - - 0.702 tetratricopeptide repeat domain 22 [Source:ZFIN;Acc:ZDB-GENE-050208-292]
22. npdc1 npdc1 221 0.978 - - 0.978 - - - - - -
23. itsn1 ENSDARG00000000086 684 0.978 - - 0.978 - - - - - - intersectin 1 (SH3 domain protein) [Source:ZFIN;Acc:ZDB-GENE-030616-226]
24. ZNHIT6 ENSDARG00000095817 355 0.978 - - 0.978 - - - - - - zinc finger HIT-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-110411-38]
25. si:dkey-92i15.4 ENSDARG00000078387 428 0.977 - - 0.977 - - - - - - si:dkey-92i15.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8422]
26. il17rd ENSDARG00000098359 1153 0.977 - - 0.977 - - - - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
27. arpc5a ENSDARG00000039142 5482 0.977 - - 0.977 - - - - - - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
28. slc6a17 ENSDARG00000068787, ENSDARG00000109560 413 0.977 - - 0.977 - - - - - - solute carrier family 6 (neutral amino acid transporter), member 17 [Source:ZFIN;Acc:ZDB-GENE-030131-8187]
29. elovl7b ENSDARG00000100185 2032 0.976 - - 0.976 - - - - - - ELOVL fatty acid elongase 7b [Source:ZFIN;Acc:ZDB-GENE-030131-5485]
30. si:ch211-250c4.3 si:ch211-250c4.3 677 0.976 - - 0.976 - - - - - -
31. prdm1a ENSDARG00000002445 1340 0.976 - - 0.976 - - - - - - PR domain containing 1a, with ZNF domain [Source:ZFIN;Acc:ZDB-GENE-030131-2193]
32. ppp1r14c ENSDARG00000077341 1587 0.976 - - 0.976 - - - - - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
33. ppil2 ENSDARG00000002016, ENSDARG00000116167 914 0.975 - - 0.975 - - - - - - peptidylprolyl isomerase (cyclophilin)-like 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1096]
34. sptlc3 ENSDARG00000030743 596 0.975 - - 0.975 - - - - - - serine palmitoyltransferase, long chain base subunit 3 [Source:ZFIN;Acc:ZDB-GENE-041210-281]
35. si:ch211-173m16.2 ENSDARG00000093284 186 0.975 - - 0.975 - - - - - - si:ch211-173m16.2 [Source:ZFIN;Acc:ZDB-GENE-070912-155]
36. ndufa4l2 153 0.975 - - 0.975 - - - - - - NDUFA4, mitochondrial complex associated like 2
37. galnt1 ENSDARG00000061335 1648 0.975 - - 0.975 - - - - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2360]
38. mxra8b ENSDARG00000062129 1004 0.974 - - 0.974 - - - - - - matrix-remodelling associated 8b [Source:ZFIN;Acc:ZDB-GENE-061013-368]
39. twist3 ENSDARG00000019646 1221 0.974 - - 0.974 - - - - - - twist3 [Source:ZFIN;Acc:ZDB-GENE-000210-7]
40. c1ql3a ENSDARG00000010350 179 0.974 - - 0.974 - - - - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
41. CR382281.1 ENSDARG00000100098 135 0.974 - - 0.974 - - - - - -
42. si:dkey-54g2.6 si:dkey-54g2.6 252 0.974 - - 0.974 - - - - - -
43. ndufaf2 ENSDARG00000069286, ENSDARG00000114828 1563 0.974 - - 0.974 - - - - - - NADH:ubiquinone oxidoreductase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-040808-28]
44. si:dkey-220k22.3 ENSDARG00000094693 166 0.974 - - 0.974 - - - - - - si:dkey-220k22.3 [Source:ZFIN;Acc:ZDB-GENE-060526-257]
45. edc3 ENSDARG00000051931 780 0.974 - - 0.974 - - - - - - enhancer of mRNA decapping 3 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-287]
46. CR855996.2 ENSDARG00000104450 310 0.974 - - 0.974 - - - - - - ATPase phospholipid transporting 8B5b [Source:NCBI gene;Acc:563450]
47. dnajc3 dnajc3 802 0.973 - - 0.973 - - - - - -
48. tbc1d10a tbc1d10a 462 0.973 - - 0.973 - - - - - -
49. mbtps2 ENSDARG00000057577 1285 0.973 - - 0.973 - - - - - - membrane-bound transcription factor peptidase, site 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6598]
50. slc2a10 ENSDARG00000090820 637 0.973 - - 0.973 - - - - - - solute carrier family 2 (facilitated glucose transporter), member 10 [Source:ZFIN;Acc:ZDB-GENE-080204-6]
51. smpd1 ENSDARG00000076121 584 0.973 - - 0.973 - - - - - - sphingomyelin phosphodiesterase 1, acid lysosomal [Source:ZFIN;Acc:ZDB-GENE-110411-222]
52. prpf4ba ENSDARG00000008784 936 0.973 - - 0.973 - - - - - - pre-mRNA processing factor 4Ba [Source:ZFIN;Acc:ZDB-GENE-040426-947]
53. ralba ENSDARG00000040778 1574 0.972 - - 0.972 - - - - - - v-ral simian leukemia viral oncogene homolog Ba (ras related) [Source:ZFIN;Acc:ZDB-GENE-040801-267]
54. pvrl2l ENSDARG00000063390 1112 0.972 - - 0.972 - - - - - - poliovirus receptor-related 2 like [Source:ZFIN;Acc:ZDB-GENE-060503-249]
55. GIT1 ENSDARG00000039489 1157 0.971 - - 0.971 - - - - - - G protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
56. BX005085.2 ENSDARG00000098122 196 0.971 0.971 - - - - - - - -
57. C11H19orf25 C11H19orf25 491 0.971 0.971 - - - - - - - -
58. anapc10 ENSDARG00000090152 1406 0.971 - - 0.971 - - - - - - anaphase promoting complex subunit 10 [Source:ZFIN;Acc:ZDB-GENE-060224-2]
59. LIMD1 LIMD1 1306 0.971 - - 0.971 - - - - - -
60. tll1 ENSDARG00000037429, ENSDARG00000113847 1039 0.971 - - 0.971 - - - - - - tolloid-like 1 [Source:ZFIN;Acc:ZDB-GENE-041020-1]
61. tmco4 ENSDARG00000078924 330 0.97 - - 0.970 - - - - - - transmembrane and coiled-coil domains 4 [Source:ZFIN;Acc:ZDB-GENE-041008-216]
62. CABZ01074130.1 ENSDARG00000105274 26501 0.97 - - 0.970 - - - - - -
63. abcg2c ENSDARG00000058574 1261 0.97 - - 0.970 - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2c [Source:ZFIN;Acc:ZDB-GENE-050517-37]
64. kif2c ENSDARG00000076228 2281 0.97 - - 0.970 - - - - - - kinesin family member 2C [Source:ZFIN;Acc:ZDB-GENE-070912-298]
65. CABZ01008011.1 CABZ01008011.1 761 0.97 - - 0.970 - - - - - -
66. PTDSS2 ENSDARG00000101018 881 0.97 - - 0.970 - - - - - - phosphatidylserine synthase 2 [Source:ZFIN;Acc:ZDB-GENE-130424-2]
67. dctn3 ENSDARG00000041363 3351 0.97 - - 0.970 - - - - - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
68. ercc5 ENSDARG00000023678 468 0.97 - - 0.970 - - - - - - excision repair cross-complementation group 5 [Source:ZFIN;Acc:ZDB-GENE-050327-28]
69. hipk3b ENSDARG00000062082 1248 0.97 - - 0.970 - - - - - - homeodomain interacting protein kinase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-82]
70. AIFM2 ENSDARG00000077549 1419 0.969 - - 0.969 - - - - - - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
71. srp14 ENSDARG00000115987 3575 0.969 - - 0.969 - - - - - - signal recognition particle 14 [Source:ZFIN;Acc:ZDB-GENE-050913-131]
72. phgdh ENSDARG00000001873 8325 0.969 - - 0.969 - - - - - - phosphoglycerate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-647]
73. gnb1a ENSDARG00000090454 481 0.969 - - 0.969 - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-030131-823]
74. lgals3l lgals3l 3833 0.969 - - 0.969 - - - - - -
75. lmna ENSDARG00000013415 1562 0.969 - - 0.969 - - - - - - lamin A [Source:ZFIN;Acc:ZDB-GENE-020424-3]
76. tbc1d12a ENSDARG00000038237 698 0.969 - - 0.969 - - - - - - TBC1 domain family, member 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3920]
77. ehd1a ENSDARG00000098853 1092 0.968 - - 0.968 - - - - - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
78. lpar1 ENSDARG00000099840 2010 0.968 - - 0.968 - - - - - - lysophosphatidic acid receptor 1 [Source:ZFIN;Acc:ZDB-GENE-030616-499]
79. stk38a ENSDARG00000019973 1343 0.968 - - 0.968 - - - - - - serine/threonine kinase 38a [Source:ZFIN;Acc:ZDB-GENE-040426-2811]
80. TMEM54 TMEM54 1882 0.968 - - 0.968 - - - - - -
81. ptges ENSDARG00000020136, ENSDARG00000115727 747 0.968 - - 0.968 - - - - - - prostaglandin E synthase [Source:ZFIN;Acc:ZDB-GENE-050407-2]
82. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 0.967 - - 0.967 - - - - - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
83. mrps33 ENSDARG00000020015 3551 0.967 - - 0.967 - - - - - - mitochondrial ribosomal protein S33 [Source:ZFIN;Acc:ZDB-GENE-040715-6]
84. sema3fb ENSDARG00000055373 834 0.967 - - 0.967 - - - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3Fb [Source:ZFIN;Acc:ZDB-GENE-050513-2]
85. FBXW7 ENSDARG00000060994 1675 0.967 - - 0.967 - - - - - - F-box and WD repeat domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-090313-79]
86. gli2a ENSDARG00000025641 2154 0.967 - - 0.967 - - - - - - GLI family zinc finger 2a [Source:ZFIN;Acc:ZDB-GENE-990706-8]
87. rarga ENSDARG00000034117 1238 0.966 - - 0.966 - - - - - - retinoic acid receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-980526-531]
88. tmf1 ENSDARG00000057997, ENSDARG00000115697 1500 0.966 - - 0.966 - - - - - - TATA element modulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-040801-25]
89. MAP4_1 MAP4_1 1153 0.966 - - 0.966 - - - - - -
90. apip ENSDARG00000003132 1212 0.966 - - 0.966 - - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
91. mark2a ENSDARG00000079905 1765 0.966 - - 0.966 - - - - - - MAP/microtubule affinity-regulating kinase 2a [Source:ZFIN;Acc:ZDB-GENE-030131-4145]
92. TMEM87A TMEM87A 2407 0.965 - - 0.965 - - - - - -
93. ikbkg ENSDARG00000017037 1225 0.965 - - 0.965 - - - - - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma [Source:ZFIN;Acc:ZDB-GENE-050327-68]
94. cby1 ENSDARG00000077409, ENSDARG00000113018 772 0.965 0.965 - - - - - - - - chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
95. dnajc10 ENSDARG00000074727 1523 0.965 - - 0.965 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:ZFIN;Acc:ZDB-GENE-070327-1]
96. fndc3ba ENSDARG00000078179 2753 0.964 - - 0.964 - - - - - - fibronectin type III domain containing 3Ba [Source:ZFIN;Acc:ZDB-GENE-070510-1]
97. BX571715.2 BX571715.2 1316 0.964 - - 0.964 - - - - - -
98. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 0.964 - - 0.964 - - - - - - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
99. iah1 ENSDARG00000015765 326 0.964 0.964 - - - - - - - - isoamyl acetate hydrolyzing esterase 1 (putative) [Source:ZFIN;Acc:ZDB-GENE-041008-186]
100. gla ENSDARG00000036155, ENSDARG00000110713 228 0.964 0.964 - - - - - - - - galactosidase, alpha [Source:ZFIN;Acc:ZDB-GENE-041010-207]

There are 778 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA