Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-3o3.8

Gene Name Gene ID Reads Annotation
si:ch211-3o3.8 si:ch211-3o3.8 2










Genes with expression patterns similar to si:ch211-3o3.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-3o3.8 si:ch211-3o3.8 2 5 - - 1.000 - 1.000 1.000 - 1.000 1.000
2. gzmk ENSDARG00000028780 1 2 - - - - - 1.000 - - 1.000 granzyme K [Source:ZFIN;Acc:ZDB-GENE-091204-352]
3. si:dkey-4c15.19 si:dkey-4c15.19 219 1.901 - - - - - - - 1.000 0.901
4. si:ch211-76l23.5 si:ch211-76l23.5 26 1.886 - - - - 0.886 1.000 - - -
5. htr1bd htr1bd 8 1.861 - - - - - 1.000 - - 0.861
6. DIP2B DIP2B 18 1.853 - - 0.853 - - 1.000 - - -
7. CIT_1 CIT_1 6 1.803 - - - - 0.803 1.000 - - -
8. si:dkey-240n22.2 si:dkey-240n22.2 2 1.803 - - - - 0.803 - - - 1.000
9. si:ch211-12e1.5 si:ch211-12e1.5 14 1.803 - - - - 0.803 1.000 - - -
10. PDE5A PDE5A 8 1.784 - - 1.000 - - - - - 0.784
11. nr4a2a ENSDARG00000017007 140 1.783 - - - - 0.783 1.000 - - - nuclear receptor subfamily 4, group A, member 2a [Source:ZFIN;Acc:ZDB-GENE-990415-184]
12. cacng7a ENSDARG00000063006 2 1.749 - - - - 1.000 0.749 - - - calcium channel, voltage-dependent, gamma subunit 7a [Source:ZFIN;Acc:ZDB-GENE-060503-814]
13. IGFN1_2 IGFN1_2 3 1.749 - - - - 0.749 1.000 - - -
14. si:dkey-109j17.5 ENSDARG00000104891 2 1.746 - - 0.746 - - 1.000 - - - si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
15. CR339051.1 CR339051.1 9 1.703 - - - - 0.703 1.000 - - -
16. grk7b ENSDARG00000055534 17 1.702 - - - - 0.835 - - - 0.867 G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
17. slc25a15a ENSDARG00000063539 50 1.579 - - - - 0.803 - - - 0.776 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15a [Source:ZFIN;Acc:ZDB-GENE-070112-1072]
18. penka ENSDARG00000004869 161 1.567 - - - - - 0.847 - 0.720 - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
19. si:dkey-9a20.8 si:dkey-9a20.8 8 1.549 - - 0.746 - 0.803 - - - -
20. asb10 ENSDARG00000099461 27 1.495 - - 0.746 - - 0.749 - - - ankyrin repeat and SOCS box containing 10 [Source:ZFIN;Acc:ZDB-GENE-060929-1106]
21. si:dkey-253d23.9 ENSDARG00000074820 24 1 - - - - - 1.000 - - - si:dkey-253d23.9 [Source:ZFIN;Acc:ZDB-GENE-050208-648]
22. BX927122.3 BX927122.3 19 1 - - - - - 1.000 - - -
23. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - 1.000 - - -
24. il21r il21r 74 1 - - - - - 1.000 - - -
25. PPAP2C PPAP2C 0 1 - - - - - - - 1.000 -
26. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - 1.000 - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
27. cep89 ENSDARG00000005092 4 1 - - - - - 1.000 - - - centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
28. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1 - - - - - 1.000 - - - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
29. NUGGC NUGGC 9 1 - - - - - 1.000 - - -
30. leprel4 leprel4 34 1 - - - - - 1.000 - - -
31. si:ch73-155e10.1 si:ch73-155e10.1 13 1 - - - - - - - - 1.000
32. pik3ap1 ENSDARG00000078285 23 1 - - - - - 1.000 - - - phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
33. klhl24 klhl24 40 1 - - - - - 1.000 - - -
34. si:dkey-111e8.5 ENSDARG00000093960 28 1 - - - - 1.000 - - - - si:dkey-111e8.5 [Source:ZFIN;Acc:ZDB-GENE-060526-192]
35. pole2 ENSDARG00000100028 42 1 - - - - - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
36. nab2 ENSDARG00000078076 108 1 - - - - - 1.000 - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
37. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - - 1.000 - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
38. si:dkey-208k4.10 si:dkey-208k4.10 1 1 - - - - - 1.000 - - -
39. si:dkey-63d15.12 ENSDARG00000075480 9 1 - - - - - 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
40. si:ch211-191n13.1 si:ch211-191n13.1 1 1 - - - - 1.000 - - - -
41. si:ch211-258f1.3 ENSDARG00000105119 23 1 - - - - - 1.000 - - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
42. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - - - - - - 1.000
43. gfpt1 ENSDARG00000057465 14 1 - - - - - 1.000 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]
44. ZBED1_3 ZBED1_3 7 1 - - - - - - - - 1.000
45. CU468896.2 CU468896.2 38 1 - - - - - 1.000 - - -
46. lpar5b ENSDARG00000068638 2 1 - - - - - 1.000 - - - lysophosphatidic acid receptor 5b [Source:ZFIN;Acc:ZDB-GENE-081022-116]
47. th2 ENSDARG00000038384 1 1 - - - - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
48. hs6st3b ENSDARG00000069500 5 1 - - - - - 1.000 - - - heparan sulfate 6-O-sulfotransferase 3b [Source:ZFIN;Acc:ZDB-GENE-070103-3]
49. CU694372.1 ENSDARG00000097988 105 1 - - - - - 1.000 - - -
50. CMA1_10 CMA1_10 0 1 - - - - - 1.000 - - -
51. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - 1.000 - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
52. CU638740.4 CU638740.4 1 1 - - - - - 1.000 - - -
53. CU459095.1 CU459095.1 7 1 - - - - - 1.000 - - -
54. ttc39a ENSDARG00000074126 7 1 - - - - - - - - 1.000 tetratricopeptide repeat domain 39A [Source:ZFIN;Acc:ZDB-GENE-091116-42]
55. CCSER1 ENSDARG00000075919 16 1 - - - - - 1.000 - - - coiled-coil serine-rich protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-422]
56. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - - - - - 1.000
57. si:ch211-260g14.9 si:ch211-260g14.9 2 1 - - - - - 1.000 - - -
58. mettl8 ENSDARG00000017359 36 1 - - - - - 1.000 - - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
59. aptx ENSDARG00000027143 87 1 - - - - - 1.000 - - - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
60. CABZ01051641.1 CABZ01051641.1 0 1 - - - - - 1.000 - - -
61. MYO9B ENSDARG00000078313 97 1 - - - - - 1.000 - - - myosin IXB [Source:HGNC Symbol;Acc:HGNC:7609]
62. CR318595.2 CR318595.2 17 1 - - - - - - - 1.000 -
63. zgc:92161 ENSDARG00000101749 27 1 - - - - - 1.000 - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
64. MUC5AC_2 MUC5AC_2 5 1 - - - - - 1.000 - - -
65. si:dkeyp-22c6.1 si:dkeyp-22c6.1 71 1 - - - - - - - - 1.000
66. asip asip 2 1 - - - - - 1.000 - - -
67. CU468142.1 CU468142.1 6 1 - - - - - 1.000 - - -
68. nid2b ENSDARG00000009471 4 1 - - - - - 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
69. il11a ENSDARG00000037859 5 1 - - - - - - - 1.000 - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
70. si:ch211-93g21.1 ENSDARG00000093602 5 1 - - - - - 1.000 - - - si:ch211-93g21.1 [Source:ZFIN;Acc:ZDB-GENE-060503-703]
71. zgc:112146 ENSDARG00000104829 34 1 - - - - - 1.000 - - - zgc:112146 [Source:ZFIN;Acc:ZDB-GENE-050417-237]
72. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - - 1.000 - - - secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
73. taar14d ENSDARG00000091705, ENSDARG00000111452 1 1 - - - - - 1.000 - - - trace amine associated receptor 14d [Source:ZFIN;Acc:ZDB-GENE-041210-315]
74. si:ch211-108c6.2 14 1 - - - - - 1.000 - - - si:ch211-108c6.2
75. RBBP6_2 RBBP6_2 23 1 - - - - - - - - 1.000
76. CABZ01083834.1 CABZ01083834.1 38 1 - - - - - 1.000 - - -
77. CABZ01053617.1 CABZ01053617.1 5 1 - - - - - 1.000 - - -
78. si:dkey-54j5.1 si:dkey-54j5.1 4 1 - - - - - - - - 1.000
79. DLG4 3 1 - - - - - - - - 1.000 discs large MAGUK scaffold protein 4, transcript variant X5
80. gpr12 ENSDARG00000062934 7 1 - - - - - 1.000 - - - G protein-coupled receptor 12 [Source:ZFIN;Acc:ZDB-GENE-100209-3]
81. si:ch211-74m13.1 ENSDARG00000094952 0 1 - - - - - - - - 1.000 si:ch211-74m13.1 [Source:ZFIN;Acc:ZDB-GENE-081104-12]
82. CT573234.2 CT573234.2 1 1 - - - - - 1.000 - - -
83. zp2.5 ENSDARG00000086522 15 1 - - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
84. Metazoa_SRP_24 Metazoa_SRP_24 4 1 - - - - - - - - 1.000
85. si:dkey-15f23.2 si:dkey-15f23.2 2 1 - - - - - 1.000 - - -
86. caspbl ENSDARG00000094433 1 1 - - - - - 1.000 - - - caspase b, like [Source:ZFIN;Acc:ZDB-GENE-090311-53]
87. upk1a ENSDARG00000021866 9 1 - - - - - - - - 1.000 uroplakin 1a [Source:ZFIN;Acc:ZDB-GENE-060421-2603]
88. CU929159.1 CU929159.1 0 1 - - - - - 1.000 - - -
89. ADAMTS15 ADAMTS15 73 1 - - - - - 1.000 - - -
90. foxb1a ENSDARG00000089042 101 1 - - - - - 1.000 - - - forkhead box B1a [Source:ZFIN;Acc:ZDB-GENE-990616-47]
91. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - 1.000 - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
92. CR792453.3 ENSDARG00000110328 5 1 - - - - - 1.000 - - - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
93. si:ch211-71k24.5 si:ch211-71k24.5 9 1 - - - - - 1.000 - - -
94. ssh1a ENSDARG00000056780 3 1 - - - - - - - - 1.000 slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
95. CR356223.4 CR356223.4 42 1 - - - - - 1.000 - - -
96. HEPACAM ENSDARG00000112032 1 1 - - - - - 1.000 - - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
97. pvrl1a 0 1 - - - - - - - 1.000 - poliovirus receptor-related 1a, transcript variant X2
98. six7 ENSDARG00000070107 140 1 - - - - - 1.000 - - - SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
99. slc25a28_1 ENSDARG00000052994, ENSDARG00000113235 2 1 - - - - - - - 1.000 - solute carrier family 25 (mitochondrial iron transporter), member 28 [Source:ZFIN;Acc:ZDB-GENE-040426-2125]
100. si:ch211-241b2.4 ENSDARG00000100686 19 1 - - - - - 1.000 - - - si:ch211-241b2.4 [Source:ZFIN;Acc:ZDB-GENE-081104-191]

There are 717 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA