Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-38m6.6

Gene Name Gene ID Reads Annotation
si:ch211-38m6.6 ENSDARG00000076959 12 si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]










Genes with expression patterns similar to si:ch211-38m6.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-38m6.6 ENSDARG00000076959 12 7 - 1.000 1.000 1.000 - 1.000 1.000 1.000 1.000 si:ch211-38m6.6 [Source:ZFIN;Acc:ZDB-GENE-070705-179]
2. klf5b ENSDARG00000062106 7 2.711 - 1.000 0.914 - - - - 0.797 - Kruppel-like factor 5b [Source:ZFIN;Acc:ZDB-GENE-080424-4]
3. nfixa ENSDARG00000043226 14 2.641 - 1.000 - 0.764 - 0.877 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
4. trim46b ENSDARG00000058649 54 2 - 1.000 - - - 1.000 - - - tripartite motif containing 46b [Source:ZFIN;Acc:ZDB-GENE-060503-466]
5. CU695006.1 CU695006.1 4 2 - 1.000 1.000 - - - - - -
6. CLSTN2 ENSDARG00000060637 41 1.925 - 1.000 - - - - 0.925 - - calsyntenin 2 [Source:ZFIN;Acc:ZDB-GENE-070911-2]
7. gfra3 ENSDARG00000087704 122 1.907 - 1.000 - - - 0.907 - - - GDNF family receptor alpha 3 [Source:ZFIN;Acc:ZDB-GENE-110512-1]
8. si:ch211-176g6.1 ENSDARG00000096522 8 1.907 - 1.000 - - - - - 0.907 - si:ch211-176g6.1 [Source:ZFIN;Acc:ZDB-GENE-121214-106]
9. BX119910.13 BX119910.13 4 1.88 - 1.000 - - - - - - 0.880
10. caps2 ENSDARG00000058486 4 1.877 - - 1.000 - - 0.877 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
11. CR936977.1 ENSDARG00000100144 4 1.877 - - 1.000 - - 0.877 - - -
12. si:dkey-200l5.4 ENSDARG00000095294 13 1.877 - 1.000 - - - 0.877 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
13. matn1 ENSDARG00000030215 11 1.855 - 0.889 - - - - - - 0.966 matrilin 1 [Source:ZFIN;Acc:ZDB-GENE-050307-3]
14. NPPC ENSDARG00000068126 45 1.837 - 1.000 - - - 0.837 - - - natriuretic peptide C [Source:ZFIN;Acc:ZDB-GENE-070705-24]
15. CU928217.1 CU928217.1 12 1.836 - 1.000 - - - - - - 0.836
16. lrrc4bb ENSDARG00000014792 47 1.832 - 0.889 - - - 0.943 - - - leucine rich repeat containing 4Bb [Source:ZFIN;Acc:ZDB-GENE-091116-44]
17. CR354540.1 ENSDARG00000004051 10 1.821 - - 1.000 - - - - 0.821 - cytochrome P450, family 7, subfamily A, polypeptide 1b [Source:NCBI gene;Acc:559097]
18. CABZ01032454.1 CABZ01032454.1 7 1.815 - 0.815 - - - 1.000 - - -
19. CABZ01084273.1 CABZ01084273.1 16 1.779 - 1.000 - - - - - - 0.779
20. CELF3 CELF3 163 1.774 - 0.898 - - - 0.876 - - -
21. cd4 cd4 4 1.764 - - 1.000 0.764 - - - - -
22. arl11l arl11l 31 1.764 - 1.000 - 0.764 - - - - -
23. zgc:173713 17 1.764 - 1.000 - 0.764 - - - - - zgc:173713, transcript variant X2
24. ttc6 ENSDARG00000104125 7 1.764 - 1.000 - 0.764 - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
25. gltpb ENSDARG00000077962 5 1.764 - 1.000 - 0.764 - - - - - glycolipid transfer protein b [Source:ZFIN;Acc:ZDB-GENE-091118-80]
26. si:dkey-119g10.4 si:dkey-119g10.4 7 1.764 - 1.000 - 0.764 - - - - -
27. lrmp ENSDARG00000045574 26 1.751 - 0.907 - - - 0.844 - - - lymphoid-restricted membrane protein [Source:ZFIN;Acc:ZDB-GENE-041210-152]
28. plekhm2 ENSDARG00000078850 207 1.746 - 0.905 - - - - 0.841 - - pleckstrin homology domain containing, family M (with RUN domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081022-169]
29. AL935186.3 ENSDARG00000109223 19 1.746 - 1.000 - - - - - - 0.746
30. XRCC2 ENSDARG00000013933 15 1.742 - 1.000 - 0.742 - - - - - X-ray repair cross complementing 2 [Source:HGNC Symbol;Acc:HGNC:12829]
31. SLC16A7 ENSDARG00000098258 4 1.733 - - - 0.764 - - - 0.969 - solute carrier family 16 member 7 [Source:HGNC Symbol;Acc:HGNC:10928]
32. si:dkey-19f21.8 si:dkey-19f21.8 12 1.728 - 1.000 - - - - - - 0.728
33. DNAH10 ENSDARG00000061486 29 1.727 - 1.000 - - - - - - 0.727 dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
34. CDH7 16 1.704 - 0.704 - - - 1.000 - - - cadherin 7, type 2, transcript variant X1
35. si:ch211-193e13.5 ENSDARG00000052656 61 1.693 - - 0.732 - - - 0.961 - - si:ch211-193e13.5 [Source:ZFIN;Acc:ZDB-GENE-081104-158]
36. neurod neurod 1189 1.689 - 0.816 - - - 0.873 - - -
37. EP400 ENSDARG00000100965 45 1.641 - - - 0.764 - 0.877 - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
38. loxhd1b ENSDARG00000074638 6 1.633 - - 0.869 0.764 - - - - - lipoxygenase homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-081104-370]
39. pkd2l1 ENSDARG00000022503 372 1.628 - 0.901 - - - 0.727 - - - polycystic kidney disease 2-like 1 [Source:ZFIN;Acc:ZDB-GENE-030616-558]
40. MAP3K6 MAP3K6 181 1.615 - 0.898 - - - - 0.717 - -
41. eef1a1a ENSDARG00000039502 234 1.59 - 0.881 - - - 0.709 - - - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
42. si:dkey-286j17.4 ENSDARG00000093402 1 1.581 - 0.704 - - - 0.877 - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
43. sh3bp5la ENSDARG00000019160 441 1.581 - - - - - 0.805 0.776 - - SH3-binding domain protein 5-like, a [Source:ZFIN;Acc:ZDB-GENE-040426-2187]
44. hn1a hn1a 115 1.501 - 0.762 - - - 0.739 - - -
45. CT583625.1 ENSDARG00000093788 10 1.488 - - 0.724 0.764 - - - - -
46. epha4a ENSDARG00000054454 1501 1.48 - - - - - 0.705 0.775 - - eph receptor A4a [Source:ZFIN;Acc:ZDB-GENE-001207-7]
47. CABZ01071530.2 CABZ01071530.2 47 1.418 - 0.704 - - - 0.714 - - -
48. si:dkey-13d5.1 si:dkey-13d5.1 3 1 - 1.000 - - - - - - -
49. cyp46a4 cyp46a4 5 1 - 1.000 - - - - - - -
50. aspn ENSDARG00000002192 218 1 - 1.000 - - - - - - - asporin (LRR class 1) [Source:ZFIN;Acc:ZDB-GENE-041105-7]
51. si:dkey-106c17.1 si:dkey-106c17.1 26 1 - 1.000 - - - - - - -
52. si:ch211-215m21.17 si:ch211-215m21.17 14 1 - 1.000 - - - - - - -
53. U6_32 U6_32 0 1 - 1.000 - - - - - - -
54. CABZ01030107.1 ENSDARG00000058631 52 1 - 1.000 - - - - - - -
55. oprm1 ENSDARG00000039434 22 1 - - - - - 1.000 - - - opioid receptor, mu 1 [Source:ZFIN;Acc:ZDB-GENE-010125-1]
56. zgc:195195 zgc:195195 6 1 - 1.000 - - - - - - -
57. sirt7 ENSDARG00000060645 1 1 - 1.000 - - - - - - - sirtuin 7 [Source:ZFIN;Acc:ZDB-GENE-050208-612]
58. MCF2L2 ENSDARG00000079742 52 1 - 1.000 - - - - - - - MCF.2 cell line derived transforming sequence-like 2 [Source:ZFIN;Acc:ZDB-GENE-100812-1]
59. cdk20 ENSDARG00000003867 27 1 - 1.000 - - - - - - - cyclin-dependent kinase 20 [Source:ZFIN;Acc:ZDB-GENE-041212-84]
60. wee2 ENSDARG00000012718, ENSDARG00000112246 2 1 - - 1.000 - - - - - - WEE1 homolog 2 (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-030131-5682]
61. foxq1a ENSDARG00000030896 121 1 - 1.000 - - - - - - - forkhead box Q1a [Source:ZFIN;Acc:ZDB-GENE-070424-74]
62. saga ENSDARG00000012610 63 1 - - - - - - 1.000 - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
63. pdia2 ENSDARG00000018263 74 1 - 1.000 - - - - - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
64. CR391967.1 CR391967.1 135 1 - 1.000 - - - - - - -
65. mfsd4a mfsd4a 179 1 - 1.000 - - - - - - -
66. hspbap1 ENSDARG00000033771 41 1 - 1.000 - - - - - - - hspb associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-040808-38]
67. CU179703.1 CU179703.1 5 1 - 1.000 - - - - - - -
68. CU896563.2 CU896563.2 2 1 - 1.000 - - - - - - -
69. si:ch211-198c19.1 ENSDARG00000089333 3 1 - 1.000 - - - - - - - si:ch211-198c19.1 [Source:ZFIN;Acc:ZDB-GENE-100922-218]
70. si:ch211-195h23.4 ENSDARG00000093337 1 1 - 1.000 - - - - - - - si:ch211-195h23.4 [Source:ZFIN;Acc:ZDB-GENE-070912-175]
71. si:ch211-138k19.2 si:ch211-138k19.2 398 1 - 1.000 - - - - - - -
72. AGAP2 ENSDARG00000099874 151 1 - 1.000 - - - - - - - ArfGAP with GTPase domain, ankyrin repeat and PH domain 2 [Source:ZFIN;Acc:ZDB-GENE-061103-343]
73. FAM184A ENSDARG00000014081 34 1 - 1.000 - - - - - - - family with sequence similarity 184, member A [Source:ZFIN;Acc:ZDB-GENE-041014-214]
74. CT583679.2 CT583679.2 10 1 - 1.000 - - - - - - -
75. si:dkey-6n3.3 si:dkey-6n3.3 9 1 - 1.000 - - - - - - -
76. SCAMP5 SCAMP5 19 1 - 1.000 - - - - - - -
77. ccdc14 ENSDARG00000098734 3 1 - 1.000 - - - - - - - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
78. vrtn ENSDARG00000061963, ENSDARG00000115943 42 1 - 1.000 - - - - - - - vertebrae development associated [Source:ZFIN;Acc:ZDB-GENE-060929-700]
79. SNORA14 SNORA14 10 1 - 1.000 - - - - - - -
80. si:dkey-49o11.1 0 1 - 1.000 - - - - - - - si:dkey-49o11.1
81. C10H5orf63 C10H5orf63 17 1 - 1.000 - - - - - - -
82. omd ENSDARG00000093600 2 1 - - 1.000 - - - - - - osteomodulin [Source:ZFIN;Acc:ZDB-GENE-060503-756]
83. zgc:123060 4 1 - - 1.000 - - - - - - zgc:123060
84. CABZ01086828.1 CABZ01086828.1 1 1 - 1.000 - - - - - - -
85. C18H15orf59 C18H15orf59 80 1 - 1.000 - - - - - - -
86. si:zfos-979f1.2 ENSDARG00000011652 24 1 - - - - - 1.000 - - - si:zfos-979f1.2 [Source:ZFIN;Acc:ZDB-GENE-091204-441]
87. BX927362.1 ENSDARG00000097469 13 1 - - 1.000 - - - - - -
88. GTPBP6 ENSDARG00000061091 29 1 - 1.000 - - - - - - - GTP binding protein 6 (putative) [Source:ZFIN;Acc:ZDB-GENE-031118-62]
89. CABZ01075242.1 ENSDARG00000114227 9 1 - 1.000 - - - - - - -
90. MARS2 ENSDARG00000009218, ENSDARG00000109472, ENSDARG00000114406 47 1 - - - - - - 1.000 - - methionyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-111201-1]
91. ABCA7 ABCA7 12 1 - 1.000 - - - - - - -
92. zgc:113274 ENSDARG00000059235, ENSDARG00000116981 19 1 - 1.000 - - - - - - - zgc:113274 [Source:ZFIN;Acc:ZDB-GENE-050508-2]
93. dazl ENSDARG00000036214 11 1 - - 1.000 - - - - - - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
94. v2rc2 ENSDARG00000055952 1 1 - - 1.000 - - - - - - vomeronasal 2 receptor, c2 [Source:ZFIN;Acc:ZDB-GENE-050419-39]
95. cdh10 cdh10 38 1 - 1.000 - - - - - - -
96. zgc:113426 ENSDARG00000051793 37 1 - 1.000 - - - - - - - zgc:113426 [Source:ZFIN;Acc:ZDB-GENE-050913-149]
97. uckl1a ENSDARG00000001686 21 1 - 1.000 - - - - - - - uridine-cytidine kinase 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-040724-238]
98. si:dkey-93h22.6 si:dkey-93h22.6 7 1 - 1.000 - - - - - - -
99. nmbb ENSDARG00000077167, ENSDARG00000115224 45 1 - 1.000 - - - - - - - neuromedin Bb [Source:ZFIN;Acc:ZDB-GENE-081022-31]
100. irf1a ENSDARG00000043492 5 1 - - 1.000 - - - - - - interferon regulatory factor 1a [Source:ZFIN;Acc:ZDB-GENE-060421-4031]

There are 1257 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA