Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-32p8.1

Gene Name Gene ID Reads Annotation
si:ch211-32p8.1 si:ch211-32p8.1 3402










Genes with expression patterns similar to si:ch211-32p8.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-32p8.1 si:ch211-32p8.1 3402 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. epyc ENSDARG00000056950 7783 3.889 0.848 0.860 - - 0.747 0.707 - - 0.727 epiphycan [Source:ZFIN;Acc:ZDB-GENE-041008-9]
3. hhatla ENSDARG00000039051 6598 3.855 0.715 0.770 0.750 0.770 0.850 - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
4. tnnt2d ENSDARG00000002988 7590 3.816 0.805 0.794 - 0.702 - 0.795 - - 0.720 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
5. zgc:92518 ENSDARG00000016343 3837 3.684 0.723 - 0.742 0.721 - 0.778 - - 0.720 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
6. CR392006.1 CR392006.1 1401 3.656 0.740 0.712 - 0.717 - 0.734 - 0.753 -
7. vcl vcl 6667 3.267 - 0.733 0.783 - - - 0.999 - 0.752
8. tgm2a ENSDARG00000070157 4516 3.229 0.789 - 0.841 0.731 - 0.868 - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
9. smyd2b ENSDARG00000005629 8181 3.224 0.822 0.765 - 0.762 - 0.875 - - - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
10. prx ENSDARG00000017246 6183 3.181 0.813 0.912 0.713 - - - - - 0.743 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
11. murca murca 6614 3.16 0.757 - 0.843 - - 0.830 - - 0.730
12. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 3.149 - 0.830 0.804 - - 0.805 - - 0.710 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
13. nexn ENSDARG00000057317 10972 3.146 0.774 - - 0.744 - 0.873 - - 0.755 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
14. znf648 ENSDARG00000104823 1918 3.121 0.799 0.703 0.804 - - 0.815 - - - zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
15. NRAP ENSDARG00000009341 3565 3.091 0.706 0.871 - - - 0.802 - 0.712 - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
16. PTPLA PTPLA 4044 3.072 0.760 0.764 - - - 0.813 - 0.735 -
17. stac3 ENSDARG00000098883 1765 3.044 0.732 0.701 0.769 - - 0.842 - - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
18. trdn ENSDARG00000041779 4283 3.015 0.711 0.724 0.810 - - 0.770 - - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
19. col11a2 ENSDARG00000012422 3204 3.002 0.802 0.724 - - 0.738 - - - 0.738 collagen, type XI, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-000208-23]
20. EHBP1L1 EHBP1L1 2500 2.976 - 0.704 0.780 0.768 - 0.724 - - -
21. neb ENSDARG00000032630, ENSDARG00000109273 19493 2.953 0.744 - 0.771 0.722 0.716 - - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
22. xirp2a ENSDARG00000071113 7113 2.951 0.742 - - - - 0.723 - 0.759 0.727 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
23. bves ENSDARG00000058548 2291 2.947 0.742 - - - - 0.715 - 0.733 0.757 blood vessel epicardial substance [Source:ZFIN;Acc:ZDB-GENE-040624-11]
24. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.934 - 0.748 0.747 0.737 - - - - 0.702
25. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 2.552 0.779 0.889 - - - 0.884 - - - calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
26. sncga ENSDARG00000034423, ENSDARG00000112260 5469 2.534 - 0.979 - - - 0.770 - - 0.785 synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
27. CABZ01079764.1 CABZ01079764.1 12103 2.519 0.792 0.977 - - - 0.750 - - -
28. si:dkeyp-118a3.2 ENSDARG00000086957 2106 2.515 0.847 0.946 - - - - - - 0.722 si:dkeyp-118a3.2 [Source:ZFIN;Acc:ZDB-GENE-060810-149]
29. tspan7b ENSDARG00000008407 5740 2.51 0.810 0.886 - - - 0.814 - - - tetraspanin 7b [Source:ZFIN;Acc:ZDB-GENE-040927-5]
30. smtnl1 ENSDARG00000041257 7410 2.475 0.833 - - - - 0.845 - - 0.797 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
31. COBLL1_1 COBLL1_1 787 2.424 0.882 0.763 - - - 0.779 - - -
32. tmod4 ENSDARG00000020890 17436 2.42 - - 0.760 - - - 0.956 - 0.704 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
33. tpm2 ENSDARG00000104682 36853 2.415 0.737 - - - - - 0.896 0.782 - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
34. chrna1 ENSDARG00000009021 2931 2.409 - 0.774 - - - 0.845 - - 0.790 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
35. mylpfb ENSDARG00000002589 70167 2.373 - 0.806 0.857 - - 0.710 - - - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
36. desma ENSDARG00000058656 30292 2.371 0.759 - 0.702 - - - 0.910 - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
37. ITGB1BP2 ENSDARG00000030176 2472 2.369 0.804 - - - - 0.833 - - 0.732 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
38. SLC3A2_1 SLC3A2_1 358 2.361 0.724 0.878 - - - 0.759 - - -
39. ntla ntla 926 2.353 0.821 0.762 - - - 0.770 - - -
40. ptrfa ptrfa 4363 2.331 0.745 0.737 - - - 0.849 - - -
41. sptb ENSDARG00000030490 7128 2.327 0.730 0.763 - - - 0.834 - - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
42. myod1 ENSDARG00000030110 6019 2.324 - 0.744 - - - 0.836 - - 0.744 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
43. tnnt3a ENSDARG00000030270 112506 2.324 0.719 - 0.865 - - 0.740 - - - troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
44. ckmb ENSDARG00000040565 505935 2.321 - - 0.854 0.736 - 0.731 - - - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
45. col9a3 ENSDARG00000037845 6564 2.32 0.756 0.862 - - - 0.702 - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
46. chad ENSDARG00000045071 903 2.309 0.818 - 0.728 - - 0.763 - - - chondroadherin [Source:ZFIN;Acc:ZDB-GENE-040426-1130]
47. zgc:194470 zgc:194470 210 2.306 0.720 0.813 - - - 0.773 - - -
48. tnnc1b ENSDARG00000037539 13945 2.302 - 0.716 - - - 0.817 - - 0.769 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
49. AIMP1 ENSDARG00000060036 4136 2.3 - 0.741 - 0.744 - 0.815 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
50. SYNPO2 SYNPO2 7382 2.298 - - 0.772 - - 0.805 - - 0.721
51. zgc:86725 2559 2.297 0.837 0.752 - - - 0.708 - - - zgc:86725
52. tspan12 ENSDARG00000032389 419 2.296 0.777 0.755 - - - 0.764 - - - tetraspanin 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1285]
53. CABZ01044297.1 CABZ01044297.1 2015 2.285 0.846 0.706 - - - 0.733 - - -
54. acsl1 acsl1 4216 2.284 - - 0.788 - - 0.732 - - 0.764
55. fam46bb 601 2.279 0.763 0.724 - - - 0.792 - - - family with sequence similarity 46, member Bb
56. ntd5 ENSDARG00000040944 4988 2.269 0.811 0.717 - - - 0.741 - - - ntl-dependent gene 5 [Source:ZFIN;Acc:ZDB-GENE-031030-7]
57. eef2l2 ENSDARG00000035256 6815 2.249 - 0.805 0.742 0.702 - - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
58. dtnba ENSDARG00000077694 5483 2.243 0.769 0.767 - - - 0.707 - - - dystrobrevin, beta a [Source:ZFIN;Acc:ZDB-GENE-030131-3967]
59. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 2.221 0.708 - 0.781 0.732 - - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
60. zgc:91999 ENSDARG00000105001 129 2.22 0.765 0.707 - - 0.748 - - - - zgc:91999 [Source:ZFIN;Acc:ZDB-GENE-040801-241]
61. shha ENSDARG00000068567, ENSDARG00000111447 1497 2.211 0.765 0.746 - - - 0.700 - - - sonic hedgehog a [Source:ZFIN;Acc:ZDB-GENE-980526-166]
62. ubac1 ENSDARG00000059722, ENSDARG00000113910 1375 2.211 - - - 0.715 - 0.730 - 0.766 - UBA domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9372]
63. tnni1al 8272 2.204 0.784 - 0.712 - - - - - 0.708 troponin I, skeletal, slow like, transcript variant X1
64. srl ENSDARG00000104587 11126 2.201 0.727 0.720 0.754 - - - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
65. cap2 ENSDARG00000104478 3266 2.195 - 0.703 - 0.748 - 0.744 - - - CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
66. plod2 ENSDARG00000011821 1656 2.189 0.746 0.724 - - - 0.719 - - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
67. casq2 ENSDARG00000008982 21802 2.185 0.709 - 0.726 0.750 - - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
68. txlnbb ENSDARG00000076241 6396 2.184 - 0.727 - - - 0.733 - - 0.724 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
69. calm1b ENSDARG00000034187 13158 2.178 0.723 - 0.724 - - 0.731 - - - calmodulin 1b [Source:ZFIN;Acc:ZDB-GENE-030804-2]
70. usp28 ENSDARG00000008880 1850 2.169 0.707 0.752 0.710 - - - - - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
71. tnni2b.1 ENSDARG00000035958 51597 2.162 0.713 - 0.724 - - - - - 0.725 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
72. myhc4 ENSDARG00000035438 1322 2.151 0.701 0.741 - - - 0.709 - - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
73. murcb murcb 13655 2.141 0.727 - 0.713 0.701 - - - - -
74. aldh7a1 ENSDARG00000018426 4637 1.812 - - - - - 0.813 0.999 - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
75. ptrfb ptrfb 567 1.765 0.912 0.853 - - - - - - -
76. tnnt3b ENSDARG00000068457 101827 1.718 - 0.897 0.821 - - - - - - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
77. FAT1 FAT1 689 1.698 0.701 - - - - - 0.997 - -
78. ttnb ttnb 73721 1.681 - - 0.809 - - 0.872 - - -
79. mybpc2b ENSDARG00000021265 9618 1.678 - 0.892 0.786 - - - - - - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
80. CABZ01086825.1 CABZ01086825.1 573 1.669 - 0.857 - - 0.812 - - - -
81. tmem47 ENSDARG00000057322 4691 1.664 - 0.897 - - - 0.767 - - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
82. myom1a ENSDARG00000061249 10230 1.662 - - 0.765 - - 0.897 - - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
83. tgfbi ENSDARG00000071586 17779 1.661 0.833 - - - - 0.828 - - - transforming growth factor, beta-induced [Source:ZFIN;Acc:ZDB-GENE-030131-73]
84. casq1b ENSDARG00000018105 2643 1.661 0.808 0.853 - - - - - - - calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
85. CR847510.1 CR847510.1 629 1.65 - 0.905 - - - 0.745 - - -
86. LMOD3 ENSDARG00000062662, ENSDARG00000115769 456 1.641 0.792 0.849 - - - - - - - leiomodin 3 (fetal) [Source:ZFIN;Acc:ZDB-GENE-090313-353]
87. sgcg_1 ENSDARG00000038107 1998 1.641 - - - - - 0.840 - - 0.801 sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
88. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 1.637 0.808 - - - - - - - 0.829 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
89. lect1 7551 1.633 0.726 0.907 - - - - - - - leukocyte cell derived chemotaxin 1, transcript variant X1
90. hhatlb ENSDARG00000005139 6674 1.625 0.762 - - - - 0.863 - - - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
91. aqp8b_1 ENSDARG00000089749 586 1.624 - 0.906 - - - 0.718 - - - aquaporin 8b [Source:ZFIN;Acc:ZDB-GENE-080220-47]
92. smpx ENSDARG00000045302 2175 1.621 0.798 - - - - 0.823 - - - small muscle protein X-linked [Source:ZFIN;Acc:ZDB-GENE-040704-24]
93. scg2a 800 1.617 - 0.844 - - 0.773 - - - - secretogranin II (chromogranin C) a
94. tmem182 tmem182 12589 1.614 - - - 0.721 - 0.893 - - -
95. rp42-pen rp42-pen 3395 1.612 - 0.821 - - - 0.791 - - -
96. PAQR4 PAQR4 2150 1.611 0.836 - - - - 0.775 - - -
97. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 1.61 - - - - - 0.827 - 0.783 - fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
98. CU463857.1 CU463857.1 5541 1.608 - - - - - 0.883 - 0.725 -
99. plcl1 ENSDARG00000067676 2457 1.606 - 0.846 - - - 0.760 - - - phospholipase C like 1 [Source:ZFIN;Acc:ZDB-GENE-090313-194]
100. BX294434.1 ENSDARG00000061272 6493 1.602 - 0.842 0.760 - - - - - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]

There are 1168 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA