Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-28p3.4

Gene Name Gene ID Reads Annotation
si:ch211-28p3.4 ENSDARG00000091009 280 si:ch211-28p3.4 [Source:ZFIN;Acc:ZDB-GENE-130603-54]










Genes with expression patterns similar to si:ch211-28p3.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-28p3.4 ENSDARG00000091009 280 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-28p3.4 [Source:ZFIN;Acc:ZDB-GENE-130603-54]
2. cacnb1 ENSDARG00000002167 1402 2.301 - 0.851 - 0.721 - - 0.729 - - calcium channel, voltage-dependent, beta 1 subunit [Source:ZFIN;Acc:ZDB-GENE-040718-399]
3. chrnd ENSDARG00000019342 2728 2.239 - 0.729 - 0.725 - - 0.785 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
4. tnnc1b ENSDARG00000037539 13945 1.61 - 0.785 - - - - 0.825 - - troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
5. actn2 actn2 1054 1.601 - 0.800 - - - - 0.801 - -
6. cox10 ENSDARG00000034309, ENSDARG00000113352 2709 1.598 - 0.732 - - - - 0.866 - - cytochrome c oxidase assembly factor heme A:farnesyltransferase COX10 [Source:ZFIN;Acc:ZDB-GENE-041111-239]
7. trdn ENSDARG00000041779 4283 1.592 - 0.812 - - - - 0.780 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
8. tnw 16679 1.585 - 0.820 - - - - 0.765 - - tenascin W, transcript variant X2
9. rapsn ENSDARG00000041133, ENSDARG00000111358 1416 1.577 - 0.729 - - - - 0.848 - - receptor-associated protein of the synapse, 43kD [Source:ZFIN;Acc:ZDB-GENE-030313-1]
10. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 1.577 - 0.840 - - - - 0.737 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
11. usp28 ENSDARG00000008880 1850 1.574 - 0.836 - - - - 0.738 - - ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]
12. PTPLA PTPLA 4044 1.57 - 0.807 - - - - 0.763 - -
13. STRIP2 ENSDARG00000059003 394 1.57 - 0.825 - - - - 0.745 - - striatin interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-120328-1]
14. hhatla ENSDARG00000039051 6598 1.562 - 0.798 - - - - 0.764 - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
15. BX294434.1 ENSDARG00000061272 6493 1.561 - 0.768 - - - - 0.793 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
16. lrrc20 ENSDARG00000105018 1970 1.561 - 0.844 - - - - 0.717 - - leucine rich repeat containing 20 [Source:ZFIN;Acc:ZDB-GENE-041114-49]
17. trim55a ENSDARG00000029596 2858 1.559 - 0.855 - - - - 0.704 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
18. zgc:195001 ENSDARG00000070484 3281 1.556 - 0.819 - - - - 0.737 - - zgc:195001 [Source:ZFIN;Acc:ZDB-GENE-081022-173]
19. six1b ENSDARG00000026473 1908 1.554 - 0.804 - - - - 0.750 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
20. ntmt1 ENSDARG00000022399 5779 1.554 - 0.745 - - - - 0.809 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
21. cacng1 cacng1 3118 1.55 - 0.800 - - - - 0.750 - -
22. zgc:158296 ENSDARG00000070923 3935 1.55 - 0.755 - - - - 0.795 - - zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
23. myoz2a ENSDARG00000012311 1373 1.544 - 0.833 - - - - 0.711 - - myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
24. nmrk2 ENSDARG00000067848 10293 1.54 - 0.735 - - - - 0.805 - - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
25. srl ENSDARG00000104587 11126 1.536 - 0.764 - - - - 0.772 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
26. jmjd7 ENSDARG00000035546 222 1.534 - 0.768 - 0.766 - - - - - jumonji domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-050417-86]
27. mef2cb ENSDARG00000009418 1124 1.534 - 0.725 - - - - 0.809 - - myocyte enhancer factor 2cb [Source:ZFIN;Acc:ZDB-GENE-040901-7]
28. txlnbb ENSDARG00000076241 6396 1.532 - 0.763 - - - - 0.769 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
29. C13H10orf71 3489 1.531 - 0.803 - - - - 0.728 - - chromosome 13 C10orf71 homolog
30. tgm1l1 ENSDARG00000102106 1437 1.529 0.808 0.721 - - - - - - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
31. kcnn3 ENSDARG00000019753 461 1.527 - - - 0.773 - - 0.754 - - potassium intermediate/small conductance calcium-activated channel, subfamily N, member 3 [Source:ZFIN;Acc:ZDB-GENE-100921-56]
32. ryr3 ENSDARG00000071331 6795 1.527 - 0.783 - - - - 0.744 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
33. musk ENSDARG00000098764 438 1.526 - 0.805 - - - - 0.721 - - muscle, skeletal, receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6458]
34. CU633479.5 ENSDARG00000114818 1815 1.522 - 0.719 - - - - 0.803 - -
35. prex1 ENSDARG00000075793 1017 1.519 - 0.806 - - - - 0.713 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1428]
36. MYOT ENSDARG00000076312 1791 1.516 - 0.769 - - - - 0.747 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
37. ppm1la ENSDARG00000063218 2142 1.516 - 0.790 - - - - 0.726 - - protein phosphatase, Mg2+/Mn2+ dependent, 1La [Source:ZFIN;Acc:ZDB-GENE-061103-118]
38. kif21a ENSDARG00000061131 913 1.513 - 0.718 - - - - 0.795 - - kinesin family member 21A [Source:ZFIN;Acc:ZDB-GENE-110411-237]
39. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 1.511 - 0.799 - - - - 0.712 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
40. DNAJA4 ENSDARG00000051762 5657 1.506 - 0.779 - - - - 0.727 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
41. alpk3a ENSDARG00000078989 1992 1.506 - 0.739 - - - - 0.767 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
42. vwde ENSDARG00000103443 5758 1.506 - 0.717 - - - - 0.789 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
43. C22H19orf70 C22H19orf70 4393 1.505 0.764 - - - - - 0.741 - -
44. CABZ01086825.1 CABZ01086825.1 573 1.504 - 0.716 - - - - 0.788 - -
45. camk2a ENSDARG00000053617 950 1.504 - 0.759 - - - - 0.745 - - calcium/calmodulin-dependent protein kinase II alpha [Source:ZFIN;Acc:ZDB-GENE-051113-72]
46. hspg2 ENSDARG00000076564 3440 1.503 - 0.791 - - - - 0.712 - - heparan sulfate proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-080807-4]
47. FRMD5 ENSDARG00000075942 569 1.498 - 0.739 - - - - 0.759 - - FERM domain containing 5 [Source:HGNC Symbol;Acc:HGNC:28214]
48. sptb ENSDARG00000030490 7128 1.496 - 0.734 - - - - 0.762 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
49. stac3 ENSDARG00000098883 1765 1.495 - 0.752 - - - - 0.743 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
50. hspb11 ENSDARG00000002204 879 1.495 - 0.714 - - - - 0.781 - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
51. GTPBP8 ENSDARG00000075033 231 1.495 - 0.762 - - - - 0.733 - - GTP binding protein 8 (putative) [Source:HGNC Symbol;Acc:HGNC:25007]
52. tomm40l ENSDARG00000036721 1714 1.493 - 0.712 - - - 0.781 - - - translocase of outer mitochondrial membrane 40 homolog, like [Source:ZFIN;Acc:ZDB-GENE-040426-2319]
53. hapln1a ENSDARG00000089769 12334 1.489 - 0.736 - - - - 0.753 - - hyaluronan and proteoglycan link protein 1a [Source:ZFIN;Acc:ZDB-GENE-050302-175]
54. NRAP ENSDARG00000009341 3565 1.489 - 0.755 - - - - 0.734 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
55. pygma ENSDARG00000055518 15972 1.488 - 0.772 - - - - 0.716 - - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
56. mlf1 ENSDARG00000077301 789 1.487 - 0.770 - - - - 0.717 - - myeloid leukemia factor 1 [Source:ZFIN;Acc:ZDB-GENE-080917-7]
57. si:ch211-114n24.7 si:ch211-114n24.7 2544 1.482 - 0.712 - - - - 0.770 - -
58. pdlim3b ENSDARG00000014248, ENSDARG00000111275 708 1.481 - 0.760 - - - - 0.721 - - PDZ and LIM domain 3b [Source:ZFIN;Acc:ZDB-GENE-060130-104]
59. syt4 ENSDARG00000036505 421 1.472 - 0.720 - 0.752 - - - - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
60. PHB2 PHB2 3755 1.472 - 0.767 - - - - 0.705 - -
61. TMPO TMPO 3264 1.47 - 0.741 - - - - 0.729 - -
62. chrna1 ENSDARG00000009021 2931 1.466 - 0.736 - - - - 0.730 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
63. znf106a ENSDARG00000016651 6049 1.465 - 0.705 - - - - 0.760 - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
64. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 1.462 - 0.740 - - - - 0.722 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
65. CCDC137 ENSDARG00000104024, ENSDARG00000110733 1855 1.461 - 0.723 - - - - 0.738 - - coiled-coil domain containing 137 [Source:ZFIN;Acc:ZDB-GENE-060929-1206]
66. sox10 ENSDARG00000077467 1936 1.448 - 0.722 - - - - 0.726 - - SRY (sex determining region Y)-box 10 [Source:ZFIN;Acc:ZDB-GENE-011207-1]
67. rp42-pen rp42-pen 3395 1.447 - 0.724 - - - - 0.723 - -
68. lrpprc ENSDARG00000043970 3847 1.443 - 0.743 - - - - 0.700 - - leucine-rich pentatricopeptide repeat containing [Source:ZFIN;Acc:ZDB-GENE-030131-7887]
69. btbd6b ENSDARG00000032369, ENSDARG00000114044 692 1.44 - 0.711 - - - - 0.729 - - BTB (POZ) domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-030829-65]
70. plod2 ENSDARG00000011821 1656 1.44 - 0.708 - - - - 0.732 - - procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2 [Source:ZFIN;Acc:ZDB-GENE-070326-1]
71. desi2 ENSDARG00000004460 1593 1.438 - 0.728 - - - - 0.710 - - desumoylating isopeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040801-39]
72. fbxo21 ENSDARG00000076611 466 1.436 - 0.703 - 0.733 - - - - - F-box protein 21 [Source:ZFIN;Acc:ZDB-GENE-100922-229]
73. mef2aa ENSDARG00000031756 2699 1.434 - 0.719 - - - - 0.715 - - myocyte enhancer factor 2aa [Source:ZFIN;Acc:ZDB-GENE-990415-163]
74. gadd45ab ENSDARG00000104571, ENSDARG00000110532 770 1.427 - - - 0.727 - 0.700 - - - growth arrest and DNA-damage-inducible, alpha, b [Source:ZFIN;Acc:ZDB-GENE-040704-60]
75. MUSTN1 MUSTN1 1882 1.413 - 0.703 - - - - 0.710 - -
76. TMEM182 TMEM182 78 0.927 - - - - - - 0.927 - -
77. SMAD4_3 SMAD4_3 131 0.906 - 0.906 - - - - - - -
78. syt8 syt8 82 0.905 - 0.905 - - - - - - -
79. tyr ENSDARG00000039077 568 0.905 - 0.905 - - - - - - - tyrosinase [Source:ZFIN;Acc:ZDB-GENE-991026-3]
80. CABZ01074181.1 CABZ01074181.1 396 0.903 - 0.903 - - - - - - -
81. chmp5a ENSDARG00000038855 129 0.903 - 0.903 - - - - - - - charged multivesicular body protein 5a [Source:ZFIN;Acc:ZDB-GENE-060503-60]
82. nkx3.2 ENSDARG00000037639 575 0.894 - 0.894 - - - - - - - NK3 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-030127-1]
83. si:ch211-247j9.1 ENSDARG00000079283 217 0.894 - 0.894 - - - - - - - si:ch211-247j9.1 [Source:ZFIN;Acc:ZDB-GENE-091204-212]
84. cox4i2 ENSDARG00000022509 362 0.893 - 0.893 - - - - - - - cytochrome c oxidase subunit 4I2 [Source:ZFIN;Acc:ZDB-GENE-040426-1775]
85. CU571255.1 CU571255.1 902 0.891 - 0.891 - - - - - - -
86. AL935029.1 AL935029.1 514 0.889 - 0.889 - - - - - - -
87. FSD2 518 0.888 - - - - - - 0.888 - - fibronectin type III and SPRY domain containing 2
88. filip1b ENSDARG00000079634 453 0.882 - - - - - - 0.882 - - filamin A interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1935]
89. slc25a26 ENSDARG00000058208, ENSDARG00000110562, ENSDARG00000111558 584 0.882 - 0.882 - - - - - - - solute carrier family 25 (S-adenosylmethionine carrier), member 26 [Source:ZFIN;Acc:ZDB-GENE-050913-126]
90. asb2a asb2a 845 0.879 - - - - - - 0.879 - -
91. npdc1 npdc1 221 0.87 - 0.870 - - - - - - -
92. fam46bb 601 0.869 - 0.869 - - - - - - - family with sequence similarity 46, member Bb
93. ZXDC ZXDC 93 0.868 - 0.868 - - - - - - -
94. dmd ENSDARG00000008487, ENSDARG00000115779 536 0.864 - 0.864 - - - - - - - dystrophin [Source:ZFIN;Acc:ZDB-GENE-010426-1]
95. zgc:91999 ENSDARG00000105001 129 0.861 - 0.861 - - - - - - - zgc:91999 [Source:ZFIN;Acc:ZDB-GENE-040801-241]
96. mt-atp8 ENSDARG00000063910 1376 0.86 - - - - - - 0.860 - - ATP synthase 8, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-011205-19]
97. sema4ab ENSDARG00000062352 409 0.859 - 0.859 - - - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ab [Source:ZFIN;Acc:ZDB-GENE-060503-363]
98. CU856173.1 CU856173.1 26 0.859 - 0.859 - - - - - - -
99. si:ch211-152p11.8 46 0.859 - 0.859 - - - - - - - si:ch211-152p11.8, transcript variant X2
100. ccnb2 ENSDARG00000036180 533 0.856 - 0.856 - - - - - - - cyclin B2 [Source:ZFIN;Acc:ZDB-GENE-030429-12]

There are 844 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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