Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-288d18.1

Gene Name Gene ID Reads Annotation
si:ch211-288d18.1 ENSDARG00000011088 255 si:ch211-288d18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-323]










Genes with expression patterns similar to si:ch211-288d18.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-288d18.1 ENSDARG00000011088 255 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-288d18.1 [Source:ZFIN;Acc:ZDB-GENE-060503-323]
2. slc52a2 ENSDARG00000102035 57 1.824 - 0.895 - 0.929 - - - - - solute carrier family 52 (riboflavin transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-2552]
3. stmn4 ENSDARG00000030106 518 1.769 - - - 0.926 - 0.843 - - - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
4. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 1.736 - - - 0.869 - 0.867 - - - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
5. CABZ01117079.1 CABZ01117079.1 123 1.736 - 0.784 - 0.952 - - - - -
6. kcnj11l ENSDARG00000031438 369 1.732 - - - 0.817 - 0.915 - - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
7. MAN2A2 ENSDARG00000063101 922 1.708 - 0.841 - - - 0.867 - - - mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
8. zgc:66484 ENSDARG00000030478 167 1.706 - - - 0.903 - 0.803 - - - zgc:66484 [Source:ZFIN;Acc:ZDB-GENE-030131-5768]
9. mir10b-2 116 1.685 - 0.815 - - - 0.870 - - - microRNA 10b-2
10. wars2 ENSDARG00000011801 134 1.667 - - - - - 0.885 0.782 - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050306-26]
11. UIMC1_1 UIMC1_1 430 1.663 0.782 - - - - 0.881 - - -
12. dnal1 ENSDARG00000034042 339 1.66 - - - 0.836 - 0.824 - - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
13. cyr61l1 ENSDARG00000035422, ENSDARG00000112039, ENSDARG00000114683 332 1.656 0.763 - - 0.893 - - - - - cysteine-rich, angiogenic inducer 61 like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-136]
14. zgc:85910 zgc:85910 299 1.653 - 0.859 - - - 0.794 - - -
15. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 1.647 - 0.829 - - - 0.818 - - - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
16. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.629 - 0.836 - - - 0.793 - - -
17. COLQ ENSDARG00000019692 164 1.627 0.792 - - - - 0.835 - - - collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase [Source:ZFIN;Acc:ZDB-GENE-110411-119]
18. ek1 ENSDARG00000020080 742 1.624 0.773 - - - - 0.851 - - - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
19. atat1 ENSDARG00000004472 700 1.617 0.717 - - - - 0.900 - - - alpha tubulin acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2120]
20. tnrc5 412 1.616 - - - 0.834 - 0.782 - - - trinucleotide repeat containing 5
21. ccdc59 ENSDARG00000045755 297 1.61 - - - 0.738 - - 0.872 - - coiled-coil domain containing 59 [Source:ZFIN;Acc:ZDB-GENE-041210-91]
22. asphd2 ENSDARG00000059629 1005 1.607 - 0.730 - - - 0.877 - - - aspartate beta-hydroxylase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-142]
23. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 1.607 0.821 - - - - 0.786 - - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
24. RPH3A RPH3A 309 1.604 - 0.824 - - - 0.780 - - -
25. PARM1 ENSDARG00000114063 58 1.6 - 0.735 - - - 0.865 - - - prostate androgen-regulated mucin-like protein 1 [Source:ZFIN;Acc:ZDB-GENE-140106-262]
26. itm2cb ENSDARG00000039650 716 1.597 0.750 - - - - 0.847 - - - integral membrane protein 2Cb [Source:ZFIN;Acc:ZDB-GENE-030131-7806]
27. zgc:110821 ENSDARG00000077085 210 1.592 - 0.753 - - - 0.839 - - - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
28. si:dkey-81p22.11 ENSDARG00000093797 68 1.589 0.736 - - - - 0.853 - - - si:dkey-81p22.11 [Source:NCBI gene;Acc:100535473]
29. mknk2b ENSDARG00000015164 2158 1.588 - - - 0.729 - 0.859 - - - MAP kinase interacting serine/threonine kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030829-2]
30. orai2 ENSDARG00000035148 330 1.586 0.732 - - - - 0.854 - - - ORAI calcium release-activated calcium modulator 2 [Source:ZFIN;Acc:ZDB-GENE-060531-127]
31. mamdc1 mamdc1 156 1.581 - - - 0.767 - 0.814 - - -
32. unc119b ENSDARG00000044362 1528 1.58 0.730 - - - - 0.850 - - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
33. scocb ENSDARG00000002217 1844 1.58 - - - - - 0.832 - 0.748 - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
34. MYO1C MYO1C 140 1.578 - 0.706 - 0.872 - - - - -
35. pax3a ENSDARG00000010192 626 1.577 - - - 0.756 - 0.821 - - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
36. PROCA1 ENSDARG00000069823 343 1.573 0.707 - - - - 0.866 - - - protein interacting with cyclin A1 [Source:ZFIN;Acc:ZDB-GENE-110418-1]
37. KDM4C ENSDARG00000061504, ENSDARG00000111347, ENSDARG00000114179 383 1.57 - - - 0.736 - 0.834 - - - lysine (K)-specific demethylase 4C [Source:ZFIN;Acc:ZDB-GENE-070209-38]
38. PLCXD1_3 PLCXD1_3 35 1.567 0.736 - - - - 0.831 - - -
39. stmn2a ENSDARG00000033234 2272 1.567 - 0.733 - - - 0.834 - - - stathmin 2a [Source:ZFIN;Acc:ZDB-GENE-041010-85]
40. kctd13 ENSDARG00000044769, ENSDARG00000112000 569 1.566 - - - - - 0.858 0.708 - - potassium channel tetramerization domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-060825-162]
41. rbp7b ENSDARG00000070486, ENSDARG00000111858 449 1.559 - 0.747 - - - 0.812 - - - retinol binding protein 7b, cellular [Source:ZFIN;Acc:ZDB-GENE-081022-134]
42. CASS4 ENSDARG00000006775 760 1.558 - - - 0.832 - 0.726 - - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
43. ndrg4 ENSDARG00000103937 1234 1.55 - 0.827 - - - 0.723 - - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
44. zgc:113531 ENSDARG00000038794 2063 1.542 0.732 0.810 - - - - - - - zgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
45. DVL3 1098 1.542 - 0.704 - - - 0.838 - - - dishevelled segment polarity protein 3
46. mppe1 ENSDARG00000045416 340 1.534 - - - - - 0.768 0.766 - - metallophosphoesterase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-195]
47. cd99l2 ENSDARG00000056722 5036 1.522 - 0.713 - - - 0.809 - - - CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
48. olig2 ENSDARG00000040946 1405 1.521 0.805 0.716 - - - - - - - oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
49. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.505 - 0.738 - - - 0.767 - - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
50. CR847998.1 ENSDARG00000104784 518 1.505 0.711 0.794 - - - - - - -
51. HIVEP2 HIVEP2 87 1.496 - - - - - 0.747 0.749 - -
52. pcdh1gc5 ENSDARG00000104826 10052 1.495 - 0.737 - - - 0.758 - - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
53. ercc3 ENSDARG00000002402 340 1.494 - 0.773 - - - - 0.721 - - excision repair cross-complementation group 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3043]
54. zgc:113220 ENSDARG00000014775 235 1.492 - 0.779 - - - - 0.713 - - zgc:113220 [Source:ZFIN;Acc:ZDB-GENE-050320-64]
55. ehmt1a ENSDARG00000068157 855 1.488 - - - - - 0.722 - 0.766 - euchromatic histone-lysine N-methyltransferase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-44]
56. CABZ01088330.1 CABZ01088330.1 679 1.485 - - - 0.755 - 0.730 - - -
57. adamts8a ENSDARG00000007709 75 1.481 - 0.765 - - - 0.716 - - - ADAM metallopeptidase with thrombospondin type 1 motif, 8a [Source:ZFIN;Acc:ZDB-GENE-060526-202]
58. sin3aa ENSDARG00000079716 580 1.478 - - - 0.771 - - 0.707 - - SIN3 transcription regulator family member Aa [Source:ZFIN;Acc:ZDB-GENE-070620-3]
59. atxn1b ENSDARG00000060862 345 1.474 - - - - - 0.771 0.703 - - ataxin 1b [Source:ZFIN;Acc:ZDB-GENE-061218-2]
60. eml1 ENSDARG00000042840 569 1.472 - - - 0.708 - 0.764 - - - echinoderm microtubule associated protein like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-156]
61. LYRM9 ENSDARG00000075528 329 1.452 0.708 - - - - 0.744 - - - LYR motif containing 9 [Source:ZFIN;Acc:ZDB-GENE-081022-28]
62. tnc ENSDARG00000021948, ENSDARG00000113518 12162 0.948 - - - - - 0.948 - - - tenascin C [Source:ZFIN;Acc:ZDB-GENE-980526-104]
63. dlec1 ENSDARG00000075825 60 0.948 - - - 0.948 - - - - - DLEC1, cilia and flagella associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-65]
64. BX088524.2 ENSDARG00000103268 564 0.946 - - - - - 0.946 - - -
65. coro1b ENSDARG00000008660 1220 0.943 - 0.943 - - - - - - - coronin, actin binding protein, 1B [Source:ZFIN;Acc:ZDB-GENE-040123-3]
66. gng13b ENSDARG00000037921 215 0.94 - - - 0.940 - - - - - guanine nucleotide binding protein (G protein), gamma 13b [Source:ZFIN;Acc:ZDB-GENE-040718-97]
67. sik2a ENSDARG00000079618, ENSDARG00000115529 65 0.94 - - - 0.940 - - - - - salt-inducible kinase 2a [Source:ZFIN;Acc:ZDB-GENE-070705-451]
68. si:dkeyp-87a6.2 ENSDARG00000093322 18 0.939 - - - 0.939 - - - - - si:dkeyp-87a6.2 [Source:ZFIN;Acc:ZDB-GENE-091118-57]
69. si:ch211-274p24.5 si:ch211-274p24.5 122 0.938 - - - 0.938 - - - - -
70. dpysl4 ENSDARG00000103490 534 0.937 - - - - - 0.937 - - - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
71. CT025914.2 CT025914.2 53 0.937 - - - 0.937 - - - - -
72. CU207301.10 CU207301.10 67 0.936 - - - 0.936 - - - - -
73. mamdc2b ENSDARG00000073695 26 0.936 - - - 0.936 - - - - - MAM domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091117-16]
74. fut11 ENSDARG00000102402 56 0.935 - - - 0.935 - - - - - fucosyltransferase 11 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-728]
75. fuom ENSDARG00000039422 82 0.935 - - - 0.935 - - - - - fucose mutarotase [Source:ZFIN;Acc:ZDB-GENE-030616-618]
76. zgc:172121 ENSDARG00000034430, ENSDARG00000116650 81 0.934 - - - 0.934 - - - - - zgc:172121 [Source:ZFIN;Acc:ZDB-GENE-030131-9545]
77. lmx1a ENSDARG00000020354 111 0.933 - - - 0.933 - - - - - LIM homeobox transcription factor 1, alpha [Source:ZFIN;Acc:ZDB-GENE-041014-332]
78. kcnf1a ENSDARG00000027940 155 0.933 - - - 0.933 - - - - - potassium voltage-gated channel, subfamily F, member 1a [Source:ZFIN;Acc:ZDB-GENE-041001-217]
79. egfl6 ENSDARG00000045958 335 0.932 - - - 0.932 - - - - - EGF-like-domain, multiple 6 [Source:ZFIN;Acc:ZDB-GENE-040718-157]
80. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 0.932 - - - 0.932 - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
81. CT025910.1 CT025910.1 143 0.931 - - - - - 0.931 - - -
82. ZFAT ENSDARG00000077987 205 0.93 - - - 0.930 - - - - - zinc finger and AT hook domain containing [Source:ZFIN;Acc:ZDB-GENE-130204-2]
83. si:ch211-250m6.8 si:ch211-250m6.8 51 0.93 - - - 0.930 - - - - -
84. CNST CNST 540 0.929 - - - 0.929 - - - - -
85. nif3l1 ENSDARG00000045249 28 0.929 - - - 0.929 - - - - - NIF3 NGG1 interacting factor 3-like 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050706-80]
86. fabp6 ENSDARG00000044566 46 0.928 - - - 0.928 - - - - - fatty acid binding protein 6, ileal (gastrotropin) [Source:ZFIN;Acc:ZDB-GENE-040625-49]
87. igf2bp2a ENSDARG00000003421 2810 0.927 - - - 0.927 - - - - - insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
88. kcnh6 kcnh6 59 0.927 - - - 0.927 - - - - -
89. sacs ENSDARG00000091042 314 0.926 - - - - - 0.926 - - - sacsin molecular chaperone [Source:ZFIN;Acc:ZDB-GENE-110411-146]
90. fgf17 ENSDARG00000102778 136 0.926 - - - - - 0.926 - - - fibroblast growth factor 17 [Source:ZFIN;Acc:ZDB-GENE-040621-1]
91. capn7 ENSDARG00000102987 386 0.926 - - - 0.926 - - - - - calpain 7 [Source:ZFIN;Acc:ZDB-GENE-111111-1]
92. tecra ENSDARG00000101585 609 0.926 - - - 0.926 - - - - - trans-2,3-enoyl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-090930-1]
93. asic1b ENSDARG00000101866 61 0.925 - - - 0.925 - - - - - acid-sensing (proton-gated) ion channel 1b [Source:ZFIN;Acc:ZDB-GENE-040513-1]
94. CABZ01086354.1_1 CABZ01086354.1_1 89 0.923 - - - 0.923 - - - - -
95. gal3st1 gal3st1 108 0.922 - - - 0.922 - - - - -
96. fgf18b ENSDARG00000043962, ENSDARG00000112937 29 0.921 - - - - - 0.921 - - - fibroblast growth factor 18b [Source:ZFIN;Acc:ZDB-GENE-050221-4]
97. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 0.921 - - - 0.921 - - - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
98. csde1 ENSDARG00000074758 172 0.921 - - - 0.921 - - - - - cold shock domain containing E1, RNA-binding [Source:ZFIN;Acc:ZDB-GENE-030131-8623]
99. TOR4A TOR4A 70 0.921 - - - 0.921 - - - - -
100. SAYSD1 SAYSD1 149 0.919 - - - 0.919 - - - - -

There are 1697 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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