Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-286b5.2

Gene Name Gene ID Reads Annotation
si:ch211-286b5.2 ENSDARG00000096514 6 si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]










Genes with expression patterns similar to si:ch211-286b5.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-286b5.2 ENSDARG00000096514 6 6 - 1.000 1.000 1.000 1.000 1.000 - - 1.000 si:ch211-286b5.2 [Source:ZFIN;Acc:ZDB-GENE-121214-251]
2. si:rp71-31c2.1 si:rp71-31c2.1 1 2 - - - - 1.000 1.000 - - -
3. apnl ENSDARG00000090900 21 2 - - - - 1.000 1.000 - - - actinoporin-like protein [Source:ZFIN;Acc:ZDB-GENE-030131-8907]
4. fam19a1 7 2 - - - - 1.000 1.000 - - - family with sequence similarity 19 member A1, C-C motif chemokine like, transcript variant X5
5. FNDC3B FNDC3B 2 2 - - - - 1.000 1.000 - - -
6. CNGA1 3 1.963 - - - 0.963 1.000 - - - - cyclic nucleotide gated channel alpha 1
7. si:ch73-115f13.1 si:ch73-115f13.1 15 1.958 - - - 0.958 1.000 - - - -
8. trpm3 ENSDARG00000039181 2 1.957 - - - - - 1.000 - - 0.957 transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
9. vtg2 ENSDARG00000055809, ENSDARG00000111529, ENSDARG00000114568 3 1.957 - - - - 1.000 - - - 0.957 vitellogenin 2 [Source:ZFIN;Acc:ZDB-GENE-001201-2]
10. fam131c ENSDARG00000037320 6 1.951 - - 0.988 0.963 - - - - - family with sequence similarity 131, member C [Source:ZFIN;Acc:ZDB-GENE-050706-119]
11. HTRA2 HTRA2 3 1.92 - - - 0.963 - - - - 0.957
12. snpha ENSDARG00000078485 4 1.92 - - - 0.963 - - - - 0.957 syntaphilin a [Source:ZFIN;Acc:ZDB-GENE-081104-227]
13. rnasel4 ENSDARG00000076983 1 1.92 - - - 0.963 - - - - 0.957 ribonuclease like 4 [Source:ZFIN;Acc:ZDB-GENE-070713-7]
14. ms4a17a.2 ENSDARG00000105674 32 1.91 - - - - 1.000 0.910 - - - membrane-spanning 4-domains, subfamily A, member 17a.2 [Source:ZFIN;Acc:ZDB-GENE-070705-367]
15. crispld1a ENSDARG00000077275 7 1.898 - 0.898 - - 1.000 - - - - cysteine-rich secretory protein LCCL domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-090612-1]
16. zgc:153654 ENSDARG00000060322 9 1.898 - 0.898 - - 1.000 - - - - zgc:153654 [Source:ZFIN;Acc:ZDB-GENE-060929-1102]
17. ptger2b ENSDARG00000037033, ENSDARG00000116581 15 1.898 - 0.898 - - 1.000 - - - - prostaglandin E receptor 2b (subtype EP2) [Source:ZFIN;Acc:ZDB-GENE-040724-267]
18. adrb1_1 ENSDARG00000007490, ENSDARG00000115574 9 1.898 - 0.898 - - - 1.000 - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
19. prom1b ENSDARG00000034007, ENSDARG00000111216, ENSDARG00000111262 14 1.896 - - - 0.896 - 1.000 - - - prominin 1 b [Source:ZFIN;Acc:ZDB-GENE-031003-1]
20. si:dkey-176g4.5 si:dkey-176g4.5 4 1.884 - - - - 1.000 0.884 - - -
21. PLCXD1_3 PLCXD1_3 35 1.867 - 0.898 0.969 - - - - - -
22. si:ch211-122l14.7 ENSDARG00000095576 5 1.861 - 0.898 - 0.963 - - - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
23. DNAH10 ENSDARG00000061486 29 1.861 - 0.898 - 0.963 - - - - - dynein axonemal heavy chain 10 [Source:HGNC Symbol;Acc:HGNC:2941]
24. si:dkey-167k11.1 si:dkey-167k11.1 14 1.849 - - - 0.849 1.000 - - - -
25. fam219b ENSDARG00000104637 3 1.843 - - - - 1.000 - - - 0.843 family with sequence similarity 219, member B [Source:ZFIN;Acc:ZDB-GENE-050327-82]
26. si:ch211-141e20.6 si:ch211-141e20.6 25 1.821 - - - - 0.821 1.000 - - -
27. si:ch211-286b5.9 ENSDARG00000086166 27 1.789 - 0.898 0.891 - - - - - - si:ch211-286b5.9 [Source:ZFIN;Acc:ZDB-GENE-121214-63]
28. zgc:165627 zgc:165627 4 1.782 - - - - 1.000 - - - 0.782
29. pdia2 ENSDARG00000018263 74 1.754 - 0.898 - - - 0.856 - - - protein disulfide isomerase family A, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-705]
30. rlbp1b ENSDARG00000045808, ENSDARG00000109856 282 1.754 - 0.898 - 0.856 - - - - - retinaldehyde binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1870]
31. cftr ENSDARG00000041107, ENSDARG00000110312 56 1.716 - - 0.878 - - 0.838 - - - cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) [Source:ZFIN;Acc:ZDB-GENE-050517-20]
32. si:ch211-265m20.8 120 1.701 - 0.898 - - - 0.803 - - - si:ch211-265m20.8, transcript variant X1
33. btr09 ENSDARG00000054805, ENSDARG00000115798 20 1.682 - - - - 0.945 0.737 - - - bloodthirsty-related gene family, member 9 [Source:ZFIN;Acc:ZDB-GENE-080722-46]
34. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1.679 - - - 0.858 0.821 - - - - protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
35. opn4xb ENSDARG00000103259 18 1.676 - 0.784 0.892 - - - - - - opsin 4xb [Source:ZFIN;Acc:ZDB-GENE-070705-526]
36. NRG3 NRG3 22 1.653 - - - - 0.821 - - - 0.832
37. si:ch211-176g6.1 ENSDARG00000096522 8 1.634 - 0.898 - - 0.736 - - - - si:ch211-176g6.1 [Source:ZFIN;Acc:ZDB-GENE-121214-106]
38. kcnk10b ENSDARG00000045956 43 1.631 - 0.898 - - - - - - 0.733 potassium channel, subfamily K, member 10b [Source:ZFIN;Acc:ZDB-GENE-050420-31]
39. gucy1b3 92 1.614 - 0.898 0.716 - - - - - - guanylate cyclase 1, soluble, beta 3
40. zgc:113691 ENSDARG00000038898 36 1.606 - 0.898 - - - 0.708 - - - zgc:113691 [Source:ZFIN;Acc:ZDB-GENE-050220-7]
41. jph3 ENSDARG00000102204 175 1.6 - 0.898 0.702 - - - - - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
42. CABZ01084323.1 ENSDARG00000104937 5 1 - - - - 1.000 - - - - protein tyrosine phosphatase, receptor type D [Source:NCBI gene;Acc:100330629]
43. EBF3 EBF3 16 1 - - - - - 1.000 - - -
44. irx4a ENSDARG00000035648 71 1 - - - - - 1.000 - - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
45. VSIG10L ENSDARG00000089237 12 1 - - - - 1.000 - - - - V-set and immunoglobulin domain containing 10 like [Source:ZFIN;Acc:ZDB-GENE-131127-231]
46. si:dkey-4c15.9 ENSDARG00000092152 1 1 - - - - 1.000 - - - - si:dkey-4c15.9 [Source:ZFIN;Acc:ZDB-GENE-050420-80]
47. dao.2 ENSDARG00000035603 8 1 - - - - 1.000 - - - - D-amino-acid oxidase, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2634]
48. pdgfra ENSDARG00000070494, ENSDARG00000113952 6 1 - - - - - 1.000 - - - platelet-derived growth factor receptor, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-208]
49. frmd3 ENSDARG00000059885 1 1 - - - - 1.000 - - - - FERM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070523-1]
50. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - - 1.000 - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
51. SYDE1 ENSDARG00000077440 4 1 - - - - 1.000 - - - - synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
52. FP103003.1_1 FP103003.1_1 6 1 - - - - 1.000 - - - -
53. ush1g ush1g 0 1 - - - - 1.000 - - - -
54. rce1a ENSDARG00000077909 4 1 - - - - 1.000 - - - - Ras converting CAAX endopeptidase 1a [Source:ZFIN;Acc:ZDB-GENE-041008-116]
55. dre-mir-2189 ENSDARG00000098723 9 1 - - - - - 1.000 - - - dre-mir-2189 [Source:miRBase;Acc:MI0010851]
56. si:dkey-24p1.6 ENSDARG00000028784, ENSDARG00000097212 23 1 - - - - - 1.000 - - - si:dkey-24p1.6 [Source:ZFIN;Acc:ZDB-GENE-060503-67]
57. zgc:194659 ENSDARG00000079347 17 1 - - - - 1.000 - - - - zgc:194659 [Source:ZFIN;Acc:ZDB-GENE-081022-139]
58. ZNF608 3 1 - - - - - 1.000 - - - zinc finger protein 608, transcript variant X2
59. BX897747.2 BX897747.2 1 1 - - - - 1.000 - - - -
60. BEGAIN_1 BEGAIN_1 7 1 - - - - 1.000 - - - -
61. CABZ01067175.1 ENSDARG00000100401 0 1 - - - - 1.000 - - - - T-cell leukemia homeobox protein 3-like [Source:NCBI gene;Acc:100008066]
62. si:dkey-219e20.2 ENSDARG00000094224 3 1 - - - - 1.000 - - - - si:dkey-219e20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-105]
63. U1_21 U1_21 0 1 - - - - 1.000 - - - -
64. si:ch211-199o1.2 ENSDARG00000056210 33 1 - - - - 1.000 - - - - si:ch211-199o1.2 [Source:ZFIN;Acc:ZDB-GENE-060503-867]
65. si:ch211-250m6.4 ENSDARG00000068869, ENSDARG00000116106 1 1 - - - - - 1.000 - - - si:ch211-250m6.4 [Source:ZFIN;Acc:ZDB-GENE-061009-21]
66. zgc:171318 zgc:171318 42 1 - - - - 1.000 - - - -
67. podn ENSDARG00000019025, ENSDARG00000113615 1 1 - - - - 1.000 - - - - podocan [Source:ZFIN;Acc:ZDB-GENE-100922-117]
68. foxa_1 ENSDARG00000087094, ENSDARG00000110743, ENSDARG00000115019 1 1 - - - - 1.000 - - - - forkhead box A sequence [Source:ZFIN;Acc:ZDB-GENE-990415-76]
69. U6_7 U6_7 0 1 - - - - 1.000 - - - -
70. fut7 ENSDARG00000044775 25 1 - - - - - 1.000 - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
71. ASPG ENSDARG00000052942 1 1 - - - - 1.000 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
72. CELF3 CELF3 163 1 - 1.000 - - - - - - -
73. zgc:92590 ENSDARG00000040282 13 1 - - - - - 1.000 - - - zgc:92590 [Source:ZFIN;Acc:ZDB-GENE-041024-15]
74. ccdc170 ENSDARG00000016161 18 1 - - - - - 1.000 - - - coiled-coil domain containing 170 [Source:ZFIN;Acc:ZDB-GENE-070112-162]
75. sh2d1aa ENSDARG00000095348 4 1 - - - - 1.000 - - - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
76. si:ch211-201p7.9 si:ch211-201p7.9 2 1 - - - - 1.000 - - - -
77. si:ch211-249h16.8 ENSDARG00000093630 1 1 - - - - 1.000 - - - - si:ch211-249h16.8 [Source:ZFIN;Acc:ZDB-GENE-090311-36]
78. HIST2H4A HIST2H4A 33 1 - - - - - 1.000 - - -
79. zgc:153441 ENSDARG00000054797 9 1 - - - - 1.000 - - - - zgc:153441 [Source:ZFIN;Acc:ZDB-GENE-060825-39]
80. BX927349.1 ENSDARG00000097041 1 1 - - - - - 1.000 - - - si:dkey-84k15.7 [Source:NCBI gene;Acc:103909075]
81. GPR78 GPR78 17 1 - - - - - 1.000 - - -
82. si:dkey-11f4.14 ENSDARG00000098461 35 1 - - - - 1.000 - - - - si:dkey-11f4.14 [Source:ZFIN;Acc:ZDB-GENE-070912-355]
83. srd5a3 ENSDARG00000043307 142 1 - - - - - 1.000 - - - steroid 5 alpha-reductase 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7915]
84. nptx2b ENSDARG00000045164 5 1 - - - - 1.000 - - - - neuronal pentraxin IIb [Source:ZFIN;Acc:ZDB-GENE-110328-1]
85. ctc1 ENSDARG00000070119 8 1 - - - - - 1.000 - - - CTS telomere maintenance complex component 1 [Source:ZFIN;Acc:ZDB-GENE-061103-271]
86. FAM188B2 4 1 - - - - 1.000 - - - - family with sequence similarity 188, member B2
87. CHCHD5 ENSDARG00000091754 35 1 - - - - - 1.000 - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
88. Metazoa_SRP_28 Metazoa_SRP_28 0 1 - - - - 1.000 - - - -
89. ZNF337_14 ZNF337_14 4 1 - - - - 1.000 - - - -
90. si:ch211-196n4.5 si:ch211-196n4.5 63 1 - - - - - 1.000 - - -
91. ftr03 8 1 - - - - 1.000 - - - - finTRIM family, member 3
92. ccdc78 ENSDARG00000030095 8 1 - - - - - 1.000 - - - coiled-coil domain containing 78 [Source:ZFIN;Acc:ZDB-GENE-060301-1]
93. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - - 1.000 - - - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
94. ca7 ENSDARG00000045139, ENSDARG00000113549 1 1 - - - - 1.000 - - - - carbonic anhydrase VII [Source:ZFIN;Acc:ZDB-GENE-040426-1786]
95. asip asip 2 1 - - - - 1.000 - - - -
96. zgc:171490 ENSDARG00000071643 4 1 - - - - - 1.000 - - - zgc:171490 [Source:ZFIN;Acc:ZDB-GENE-080204-29]
97. zgc:158321 zgc:158321 1 1 - - - - 1.000 - - - -
98. ADAMTS15_1 ADAMTS15_1 11 1 - - - - - 1.000 - - -
99. si:ch211-106h4.5 ENSDARG00000095059 1 1 - - - - 1.000 - - - - si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15]
100. ZSWIM2 ENSDARG00000075700 8 1 - - - - 1.000 - - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]

There are 1050 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA