Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-285f17.1

Gene Name Gene ID Reads Annotation
si:ch211-285f17.1 ENSDARG00000059333 255 si:ch211-285f17.1 [Source:ZFIN;Acc:ZDB-GENE-000607-77]










Genes with expression patterns similar to si:ch211-285f17.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-285f17.1 ENSDARG00000059333 255 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-285f17.1 [Source:ZFIN;Acc:ZDB-GENE-000607-77]
2. fam8a1 fam8a1 561 1.705 - 0.876 - - - - 0.829 - -
3. zgc:165582 ENSDARG00000074362 198 1.552 - - - - - 0.803 0.749 - - zgc:165582 [Source:ZFIN;Acc:ZDB-GENE-070820-9]
4. CABZ01044048.1 ENSDARG00000011463 20 1.516 - - - - - 0.803 0.713 - - coagulation factor IX-like [Source:NCBI gene;Acc:100004411]
5. fam83fb ENSDARG00000104188 79 1.479 - - - - - 0.712 0.767 - - family with sequence similarity 83, member Fb [Source:ZFIN;Acc:ZDB-GENE-041114-194]
6. stc2a ENSDARG00000056680, ENSDARG00000109468 1156 1.458 0.704 0.754 - - - - - - - stanniocalcin 2a [Source:ZFIN;Acc:ZDB-GENE-041008-14]
7. SRR SRR 544 1.443 - 0.737 - - - 0.706 - - -
8. BX255969.1 BX255969.1 16 0.901 - - - - - 0.901 - - -
9. fasn_1 ENSDARG00000087657 31 0.899 - - - - - 0.899 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
10. CU469544.1 CU469544.1 219 0.895 - - - - - 0.895 - - -
11. CR774186.1 CR774186.1 92 0.889 - - - - - - 0.889 - -
12. fgf6a ENSDARG00000009351 799 0.884 0.884 - - - - - - - - fibroblast growth factor 6a [Source:ZFIN;Acc:ZDB-GENE-980526-559]
13. bivm ENSDARG00000061409, ENSDARG00000111376 25 0.872 - - - - - 0.872 - - - basic, immunoglobulin-like variable motif containing [Source:ZFIN;Acc:ZDB-GENE-010822-3]
14. pcdh8 ENSDARG00000006467 317 0.87 - - - - - 0.870 - - - protocadherin 8 [Source:ZFIN;Acc:ZDB-GENE-980526-242]
15. si:ch211-216b21.2 ENSDARG00000060253 54 0.87 - - - - - 0.870 - - - si:ch211-216b21.2 [Source:ZFIN;Acc:ZDB-GENE-130603-96]
16. phf12a ENSDARG00000074303 1025 0.867 - - - - - - 0.867 - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
17. nudt14 ENSDARG00000062335, ENSDARG00000111320 294 0.866 - - - - - - 0.866 - - nudix (nucleoside diphosphate linked moiety X)-type motif 14 [Source:ZFIN;Acc:ZDB-GENE-041014-254]
18. atp10a ENSDARG00000061039, ENSDARG00000110280 869 0.863 - 0.863 - - - - - - - ATPase phospholipid transporting 10A [Source:ZFIN;Acc:ZDB-GENE-101102-1]
19. C1H20orf27 C1H20orf27 69 0.86 - - - - - 0.860 - - -
20. slc7a6os ENSDARG00000010596 1599 0.858 - 0.858 - - - - - - - solute carrier family 7, member 6 opposite strand [Source:ZFIN;Acc:ZDB-GENE-041114-32]
21. grin2aa ENSDARG00000034493 75 0.853 - - - - - 0.853 - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2A, a [Source:ZFIN;Acc:ZDB-GENE-070424-129]
22. efcab1 ENSDARG00000061377 234 0.851 - 0.851 - - - - - - - EF-hand calcium binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-040914-40]
23. mtf2 ENSDARG00000005590 82 0.851 - - - - - 0.851 - - - metal response element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-060512-94]
24. six3a ENSDARG00000058008, ENSDARG00000114971 586 0.849 - - - - - 0.849 - - - SIX homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-990415-127]
25. fsd1 ENSDARG00000062017 207 0.848 - - - - - 0.848 - - - fibronectin type III and SPRY domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-218]
26. Mar-08 Mar-08 52 0.847 - - - - - 0.847 - - -
27. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 0.846 - - - - - 0.846 - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
28. SNORA19 SNORA19 24 0.846 - - - - - 0.846 - - -
29. zgc:101560 1 0.846 - - - - - 0.846 - - - zgc:101560, transcript variant 2
30. fam26f 595 0.846 - - - - - 0.846 - - - family with sequence similarity 26, member F
31. tubgcp2 ENSDARG00000013079 1520 0.846 - 0.846 - - - - - - - tubulin, gamma complex associated protein 2 [Source:ZFIN;Acc:ZDB-GENE-031118-150]
32. RPS6KA2 ENSDARG00000028469 8 0.844 - - - - - 0.844 - - - ribosomal protein S6 kinase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-090827-1]
33. si:dkey-12l12.1 ENSDARG00000094422 168 0.844 0.844 - - - - - - - - si:dkey-12l12.1 [Source:ZFIN;Acc:ZDB-GENE-091204-232]
34. BX957322.2 ENSDARG00000095302 68 0.844 - - - - - 0.844 - - -
35. si:dkey-157e10.7 si:dkey-157e10.7 105 0.844 - - - - - 0.844 - - -
36. DNAJC16 ENSDARG00000059699 507 0.839 - - - - - - 0.839 - - DnaJ (Hsp40) homolog, subfamily C, member 16 [Source:ZFIN;Acc:ZDB-GENE-130530-683]
37. isl2b ENSDARG00000053499 132 0.839 - - - - - - 0.839 - - ISL LIM homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-990415-133]
38. dnajc5ga ENSDARG00000041896 1478 0.835 - 0.835 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma a [Source:ZFIN;Acc:ZDB-GENE-030131-1583]
39. grapa ENSDARG00000005414 29 0.834 - - - - - 0.834 - - - GRB2 related adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-050522-347]
40. tm7sf3 ENSDARG00000093658 754 0.833 - 0.833 - - - - - - - transmembrane 7 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1770]
41. ap5s1 ENSDARG00000076755 318 0.831 - 0.831 - - - - - - - adaptor related protein complex 5 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-090313-184]
42. nrg2b ENSDARG00000086585 100 0.83 - - - - - 0.830 - - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
43. LIMD1_1 LIMD1_1 348 0.829 - - - - - 0.829 - - -
44. sh3rf1 ENSDARG00000070470 1463 0.829 - 0.829 - - - - - - - SH3 domain containing ring finger 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6288]
45. SLC16A3 ENSDARG00000045051 83 0.826 - - - - - 0.826 - - - solute carrier family 16 (monocarboxylate transporter), member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-5487]
46. mcu ENSDARG00000101175 1287 0.825 - 0.825 - - - - - - - mitochondrial calcium uniporter [Source:ZFIN;Acc:ZDB-GENE-061013-24]
47. PIGG PIGG 106 0.825 - - - - - - 0.825 - -
48. RAI1 ENSDARG00000076679 59 0.822 - - - - - 0.822 - - - retinoic acid induced 1 [Source:ZFIN;Acc:ZDB-GENE-101203-2]
49. trim35-1 ENSDARG00000052037 43 0.822 - - - - - 0.822 - - - tripartite motif containing 35-1 [Source:ZFIN;Acc:ZDB-GENE-050522-17]
50. si:dkey-77f17.1 si:dkey-77f17.1 83 0.822 - - - - - 0.822 - - -
51. prox1b ENSDARG00000088810, ENSDARG00000113014 33 0.822 - - - - - 0.822 - - - prospero homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-050107-3]
52. atp8b1 ENSDARG00000060980 181 0.822 - - - - - 0.822 - - - ATPase phospholipid transporting 8B1 [Source:ZFIN;Acc:ZDB-GENE-091116-14]
53. CU695076.1 CU695076.1 7 0.822 - - - - - 0.822 - - -
54. tph1b ENSDARG00000036082, ENSDARG00000112888 79 0.822 - - - - - 0.822 - - - tryptophan hydroxylase 1b [Source:ZFIN;Acc:ZDB-GENE-030805-6]
55. BX571853.2 ENSDARG00000110441 21 0.822 - - - - - 0.822 - - -
56. BSN_1 BSN_1 21 0.822 - - - - - 0.822 - - -
57. KIF21B ENSDARG00000009733 53 0.822 - - - - - 0.822 - - - kinesin family member 21B [Source:ZFIN;Acc:ZDB-GENE-130530-537]
58. foxb1b ENSDARG00000053650, ENSDARG00000110408, ENSDARG00000113373 51 0.822 - - - - - 0.822 - - - forkhead box B1b [Source:ZFIN;Acc:ZDB-GENE-990415-77]
59. flvcr1 ENSDARG00000031587 287 0.82 - - - - - - 0.820 - - feline leukemia virus subgroup C cellular receptor 1 [Source:ZFIN;Acc:ZDB-GENE-041014-359]
60. saga ENSDARG00000012610 63 0.819 - - - - - 0.819 - - - S-antigen; retina and pineal gland (arrestin) a [Source:ZFIN;Acc:ZDB-GENE-040426-1538]
61. mphosph6 ENSDARG00000093007 340 0.819 - - - - - - 0.819 - - M-phase phosphoprotein 6 [Source:ZFIN;Acc:ZDB-GENE-040801-137]
62. KLHL24 KLHL24 268 0.819 - - - - - - 0.819 - -
63. si:dkey-253a1.2 si:dkey-253a1.2 52 0.818 - - - - - 0.818 - - -
64. zfyve28 ENSDARG00000060430 797 0.818 - - - - - - 0.818 - - zinc finger, FYVE domain containing 28 [Source:ZFIN;Acc:ZDB-GENE-061103-208]
65. TMEM63C ENSDARG00000004158, ENSDARG00000112348 21 0.816 - - - - - 0.816 - - - transmembrane protein 63C [Source:ZFIN;Acc:ZDB-GENE-120928-2]
66. zgc:73228 zgc:73228 97 0.816 - - - - - 0.816 - - -
67. ppp6r2a ENSDARG00000045540 60 0.815 - - - - - 0.815 - - - protein phosphatase 6, regulatory subunit 2a [Source:ZFIN;Acc:ZDB-GENE-030131-5428]
68. scrn3 ENSDARG00000016611 74 0.813 - - - - - - 0.813 - - secernin 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4783]
69. SCAMP5 SCAMP5 19 0.813 - - - - - 0.813 - - -
70. limch1b ENSDARG00000103774 1087 0.813 - 0.813 - - - - - - - LIM and calponin homology domains 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9210]
71. MYO1C MYO1C 140 0.811 - - - - - - 0.811 - -
72. ctgfa ENSDARG00000042934, ENSDARG00000112741 2123 0.811 - 0.811 - - - - - - - connective tissue growth factor a [Source:ZFIN;Acc:ZDB-GENE-030131-102]
73. usp4 ENSDARG00000014770 1684 0.81 - 0.810 - - - - - - - ubiquitin specific peptidase 4 (proto-oncogene) [Source:ZFIN;Acc:ZDB-GENE-041008-187]
74. COL27A1 COL27A1 94 0.81 0.810 - - - - - - - -
75. nosip ENSDARG00000037958, ENSDARG00000112335 59 0.81 - - - - - - 0.810 - - nitric oxide synthase interacting protein [Source:ZFIN;Acc:ZDB-GENE-041114-146]
76. ical1 ENSDARG00000057688 357 0.809 - - - - - - 0.809 - - islet cell autoantigen 1-like [Source:ZFIN;Acc:ZDB-GENE-030910-4]
77. traf2b ENSDARG00000101036 429 0.807 - 0.807 - - - - - - - Tnf receptor-associated factor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5345]
78. C18H19orf54 C18H19orf54 460 0.805 0.805 - - - - - - - -
79. si:dkeyp-33c10.5 11 0.803 - - - - - 0.803 - - - si:dkeyp-33c10.5, transcript variant X2
80. nsfa ENSDARG00000007654 16 0.803 - - - - - 0.803 - - - N-ethylmaleimide-sensitive factor a [Source:ZFIN;Acc:ZDB-GENE-030616-37]
81. zgc:165453 ENSDARG00000078183 3 0.803 - - - - - 0.803 - - - zgc:165453 [Source:ZFIN;Acc:ZDB-GENE-070720-13]
82. syt9b ENSDARG00000029239 31 0.803 - - - - - 0.803 - - - synaptotagmin IXb [Source:ZFIN;Acc:ZDB-GENE-040822-6]
83. zgc:92249 14 0.803 - - - - - 0.803 - - - zgc:92249
84. FAM120B ENSDARG00000030804 1 0.803 - - - - - 0.803 - - - family with sequence similarity 120B [Source:ZFIN;Acc:ZDB-GENE-040801-119]
85. wfs1b ENSDARG00000074617 69 0.803 - - - - - 0.803 - - - Wolfram syndrome 1b (wolframin) [Source:ZFIN;Acc:ZDB-GENE-050809-19]
86. lmod2a ENSDARG00000045634, ENSDARG00000112060, ENSDARG00000113325 2 0.803 - - - - - 0.803 - - - leiomodin 2 (cardiac) a [Source:ZFIN;Acc:ZDB-GENE-040912-41]
87. zgc:77112 ENSDARG00000015657 24 0.803 - - - - - 0.803 - - - zgc:77112 [Source:ZFIN;Acc:ZDB-GENE-040426-2219]
88. zgc:113263 ENSDARG00000045842 51 0.803 - - - - - 0.803 - - - zgc:113263 [Source:ZFIN;Acc:ZDB-GENE-050306-34]
89. 5S_rRNA_15 5S_rRNA_15 9 0.803 - - - - - 0.803 - - -
90. IKZF4 ENSDARG00000037068 36 0.803 - - - - - 0.803 - - - IKAROS family zinc finger 4 [Source:ZFIN;Acc:ZDB-GENE-180319-1]
91. cyp2n13 ENSDARG00000042953 10 0.803 - - - - - 0.803 - - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
92. xcr1a xcr1a 3 0.803 - - - - - 0.803 - - -
93. BX005294.2 ENSDARG00000109361 3 0.803 - - - - - 0.803 - - -
94. hmgb2a ENSDARG00000029722 28 0.803 - - - - - 0.803 - - - high mobility group box 2a [Source:ZFIN;Acc:ZDB-GENE-051120-126]
95. slc41a1 ENSDARG00000070214, ENSDARG00000114707 20 0.803 - - - - - 0.803 - - - solute carrier family 41 (magnesium transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4700]
96. tbc1d31 ENSDARG00000074623 94 0.803 - - - - - - 0.803 - - TBC1 domain family, member 31 [Source:ZFIN;Acc:ZDB-GENE-061218-4]
97. PLCB1 2 0.803 - - - - - 0.803 - - - phospholipase C beta 1
98. si:dkey-11e23.3 si:dkey-11e23.3 3 0.803 - - - - - 0.803 - - -
99. prepl ENSDARG00000017853, ENSDARG00000114415 4 0.803 - - - - - 0.803 - - - prolyl endopeptidase like [Source:ZFIN;Acc:ZDB-GENE-090313-224]
100. sept7b ENSDARG00000052673 432 0.803 - 0.803 - - - - - - - septin 7b [Source:ZFIN;Acc:ZDB-GENE-030131-37]

There are 446 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA