Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-284o19.8

Gene Name Gene ID Reads Annotation
si:ch211-284o19.8 ENSDARG00000053836 43 si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]










Genes with expression patterns similar to si:ch211-284o19.8

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-284o19.8 ENSDARG00000053836 43 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]
2. ttr ENSDARG00000037191 11 1.887 - - - - 0.889 - 0.998 - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
3. TRHDE_1 TRHDE_1 102 1.86 - - - - 0.866 - 0.994 - -
4. trim25l ENSDARG00000020863 292 1.794 - - - - - 0.859 0.935 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
5. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 1.776 - - - - - 0.797 0.979 - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
6. si:ch211-219f7.3 si:ch211-219f7.3 48 1.775 - - - - - 0.784 0.991 - -
7. hsdl1 ENSDARG00000041736 171 1.766 - - - - - 0.853 0.913 - - hydroxysteroid dehydrogenase like 1 [Source:ZFIN;Acc:ZDB-GENE-041212-31]
8. zgc:174651 zgc:174651 90 1.756 - - - - - 0.833 0.923 - -
9. usp11 ENSDARG00000076303 183 1.743 - - - - - 0.793 0.950 - - ubiquitin specific peptidase 11 [Source:ZFIN;Acc:ZDB-GENE-081104-421]
10. SUOX ENSDARG00000091574 122 1.726 - - - - - 0.738 0.988 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
11. zgc:113452 ENSDARG00000074146 759 1.685 - - - - - 0.784 0.901 - - zgc:113452 [Source:ZFIN;Acc:ZDB-GENE-050913-16]
12. fastkd1 ENSDARG00000056128 141 1.67 - - - - - 0.701 0.969 - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
13. TPMT TPMT 138 1.646 - - - - - 0.711 0.935 - -
14. mmp9 ENSDARG00000042816 298 1.64 - - - - - 0.754 0.886 - - matrix metallopeptidase 9 [Source:ZFIN;Acc:ZDB-GENE-040426-2132]
15. zgc:136439 ENSDARG00000009267 720 1.64 - - - - - 0.745 0.895 - - zgc:136439 [Source:ZFIN;Acc:ZDB-GENE-060421-2858]
16. rad18 ENSDARG00000027938 574 1.627 - - - - - 0.829 0.798 - - RAD18 E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-745]
17. tmem205 ENSDARG00000100677 101 1.605 - - - - - 0.791 0.814 - - transmembrane protein 205 [Source:ZFIN;Acc:ZDB-GENE-070112-1692]
18. kcnk1a ENSDARG00000045067 743 1.575 - - - - - 0.714 0.861 - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
19. olfml3b ENSDARG00000062171 264 1.556 - - - - - 0.738 0.818 - - olfactomedin-like 3b [Source:ZFIN;Acc:ZDB-GENE-050302-161]
20. tgm5l ENSDARG00000098837 174 1.542 - - - - - 0.758 0.784 - - transglutaminase 5, like [Source:ZFIN;Acc:ZDB-GENE-110411-176]
21. ikbkb ENSDARG00000079123 498 1.541 - - - - - 0.718 0.823 - - inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta [Source:ZFIN;Acc:ZDB-GENE-071115-2]
22. osbpl10 osbpl10 836 1.515 - - - - - 0.774 0.741 - -
23. grid1b ENSDARG00000044161 20 1.51 - - - - 0.761 0.749 - - - glutamate receptor, ionotropic, delta 1b [Source:ZFIN;Acc:ZDB-GENE-121214-84]
24. mtfr2 ENSDARG00000060394 482 1.504 - - - - - 0.710 0.794 - - mitochondrial fission regulator 2 [Source:ZFIN;Acc:ZDB-GENE-061013-398]
25. iqsec2 iqsec2 304 1.498 - - - - 0.776 - 0.722 - -
26. IER2 IER2 604 1.497 - - - - - 0.701 0.796 - -
27. si:ch211-179l5.5 si:ch211-179l5.5 249 1.449 - - - - - 0.718 0.731 - -
28. prkcba ENSDARG00000008723, ENSDARG00000116813 30 1 - - - - - - 1.000 - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
29. trim62 ENSDARG00000060901 12 0.998 - - - - - - 0.998 - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
30. LAMC2 ENSDARG00000068288 37 0.998 - - - - - - 0.998 - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
31. SLC38A9 ENSDARG00000032769 35 0.998 - - - - - - 0.998 - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
32. ENSDARG00000091446 ENSDARG00000091446 239 0.998 - - - - - - 0.998 - -
33. MPPED1 ENSDARG00000088181 117 0.998 - - - - - - 0.998 - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
34. ctgfb ENSDARG00000104292 69 0.998 - - - - - - 0.998 - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
35. si:dkey-177p2.15p si:dkey-177p2.15p 20 0.998 - - - - - - 0.998 - -
36. BICD2_1 BICD2_1 18 0.998 - - - - - - 0.998 - -
37. si:busm1-180g5.7 si:busm1-180g5.7 15 0.998 - - - - - - 0.998 - -
38. VWA5A_1 VWA5A_1 6 0.998 - - - - - - 0.998 - -
39. si:dkey-240h12.4 ENSDARG00000034210 114 0.998 - - - - - - 0.998 - - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
40. si:ch211-117l17.4 ENSDARG00000103534 24 0.998 - - - - - - 0.998 - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
41. zgc:136254 ENSDARG00000068465 27 0.998 - - - - - - 0.998 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
42. guca1c ENSDARG00000030758 9 0.998 - - - - - - 0.998 - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
43. KBTBD13 ENSDARG00000076449 10 0.997 - - - - - - 0.997 - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
44. tnfb ENSDARG00000013598 94 0.997 - - - - - - 0.997 - - tumor necrosis factor b (TNF superfamily, member 2) [Source:ZFIN;Acc:ZDB-GENE-050601-2]
45. adck1 ENSDARG00000062561 22 0.997 - - - - - - 0.997 - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
46. fubp3 ENSDARG00000086896 21 0.996 - - - - - - 0.996 - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
47. kcnh6 kcnh6 59 0.996 - - - - - - 0.996 - -
48. pign ENSDARG00000077532 123 0.996 - - - - - - 0.996 - - phosphatidylinositol glycan anchor biosynthesis, class N [Source:ZFIN;Acc:ZDB-GENE-080204-114]
49. fpgt ENSDARG00000042139 155 0.996 - - - - - - 0.996 - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
50. CU681846.1 CU681846.1 86 0.995 - - - - - - 0.995 - -
51. CR790368.1 ENSDARG00000100936 20 0.995 - - - - - - 0.995 - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
52. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 0.995 - - - - - - 0.995 - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
53. si:dkey-16n15.3 223 0.995 - - - - - - 0.995 - - si:dkey-16n15.3
54. cdadc1 ENSDARG00000036650 16 0.994 - - - - - - 0.994 - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
55. si:ch211-113a14.12 ENSDARG00000077456 1004 0.994 - - - - - - 0.994 - - si:ch211-113a14.12 [Source:ZFIN;Acc:ZDB-GENE-121214-99]
56. lpar6b ENSDARG00000069441 65 0.994 - - - - - - 0.994 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
57. si:ch211-135f11.1 166 0.994 - - - - - - 0.994 - - si:ch211-135f11.1, transcript variant X3
58. ccrl1a ccrl1a 40 0.994 - - - - - - 0.994 - -
59. ca8 ENSDARG00000039098 401 0.993 - - - - - - 0.993 - - carbonic anhydrase VIII [Source:ZFIN;Acc:ZDB-GENE-050417-26]
60. dhrs13l1 ENSDARG00000098746 102 0.992 - - - - - - 0.992 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
61. otx2 766 0.992 - - - - - - 0.992 - - orthodenticle homeobox 2, transcript variant X2
62. si:rp71-3c13.3 si:rp71-3c13.3 128 0.99 - - - - - - 0.990 - -
63. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 0.99 - - - - - - 0.990 - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
64. TTBK1 TTBK1 120 0.989 - - - - - - 0.989 - -
65. U3 U3 287 0.989 - - - - - - 0.989 - -
66. CABZ01048373.1 CABZ01048373.1 81 0.989 - - - - - - 0.989 - -
67. fntb ENSDARG00000027916 736 0.988 - - - - - - 0.988 - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
68. si:ch211-174j14.2 ENSDARG00000093015 111 0.987 - - - - - - 0.987 - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
69. spsb3a ENSDARG00000077737 527 0.987 - - - - - - 0.987 - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
70. ulk4 ENSDARG00000004176 85 0.987 - - - - - - 0.987 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
71. GSG2 GSG2 1162 0.987 - - - - - - 0.987 - -
72. BX296557.2 BX296557.2 1083 0.987 - - - - - - 0.987 - -
73. extl2 ENSDARG00000063191 118 0.986 - - - - - - 0.986 - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
74. si:dkeyp-86h10.3 ENSDARG00000095615 253 0.986 - - - - - - 0.986 - - si:dkeyp-86h10.3 [Source:ZFIN;Acc:ZDB-GENE-100922-65]
75. ppcs ENSDARG00000061889 224 0.986 - - - - - - 0.986 - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
76. tbc1d22a ENSDARG00000045510 363 0.985 - - - - - - 0.985 - - TBC1 domain family, member 22a [Source:ZFIN;Acc:ZDB-GENE-041114-144]
77. tmprss13a ENSDARG00000100969 84 0.983 - - - - - - 0.983 - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
78. SLC44A2 ENSDARG00000037059 88 0.983 - - - - - - 0.983 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
79. fam193b ENSDARG00000102831 442 0.983 - - - - - - 0.983 - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
80. zgc:110434_1 30 0.983 - - - - - - 0.983 - - zgc:110434
81. rbm5 ENSDARG00000098280 396 0.979 - - - - - - 0.979 - - RNA binding motif protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3022]
82. tnfaip6 ENSDARG00000093440, ENSDARG00000111060 91 0.979 - - - - - - 0.979 - - tumor necrosis factor, alpha-induced protein 6 [Source:ZFIN;Acc:ZDB-GENE-060421-2654]
83. fam83b ENSDARG00000078309 318 0.978 - - - - - - 0.978 - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
84. zgc:165481 ENSDARG00000060092 95 0.978 - - - - - - 0.978 - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
85. plekhf1 ENSDARG00000102435, ENSDARG00000110694 314 0.975 - - - - - - 0.975 - - pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1289]
86. si:dkey-56m15.4 si:dkey-56m15.4 39 0.975 - - - - - - 0.975 - -
87. mob1a_1 ENSDARG00000102320, ENSDARG00000111884, ENSDARG00000116249 91 0.974 - - - - - - 0.974 - - MOB kinase activator 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6506]
88. CT030012.1 ENSDARG00000105611 154 0.973 - - - - - - 0.973 - -
89. inadl 80 0.972 - - - - - - 0.972 - - InaD-like (Drosophila), transcript variant X4
90. FUZ ENSDARG00000079730 821 0.972 - - - - - - 0.972 - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
91. BX088711.1 BX088711.1 125 0.971 - - - - - - 0.971 - -
92. IFI30 ENSDARG00000056378, ENSDARG00000112359 73 0.97 - - - - - - 0.970 - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
93. ENSDARG00000088164 ENSDARG00000088164 59 0.97 - - - - 0.970 - - - -
94. CABZ01044023.1 ENSDARG00000117734 240 0.968 - - - - - - 0.968 - -
95. si:ch211-259i2.2 si:ch211-259i2.2 45 0.968 - - - - - - 0.968 - -
96. nudt17 ENSDARG00000008014 479 0.967 - - - - - - 0.967 - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
97. pdpk1a ENSDARG00000062304 213 0.967 - - - - - - 0.967 - - 3-phosphoinositide dependent protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-109]
98. stk16 ENSDARG00000037777 255 0.966 - - - - - - 0.966 - - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
99. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 0.965 - - - - - - 0.965 - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
100. TARS2 76 0.965 - - - - - - 0.965 - - threonyl-tRNA synthetase 2, mitochondrial (putative), transcript variant X2

There are 953 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA