Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-283e2.7

Gene Name Gene ID Reads Annotation
si:ch211-283e2.7 19 si:ch211-283e2.7, transcript variant X2










Genes with expression patterns similar to si:ch211-283e2.7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-283e2.7 19 5 - - 1.000 - 1.000 1.000 - 1.000 1.000 si:ch211-283e2.7, transcript variant X2
2. si:ch211-162i8.6 si:ch211-162i8.6 15 1.836 - - - - 0.883 0.953 - - -
3. ncf4 ENSDARG00000040812, ENSDARG00000110339 45 1.806 - - 0.904 - - 0.902 - - - neutrophil cytosolic factor 4 [Source:ZFIN;Acc:ZDB-GENE-041124-1]
4. has2 ENSDARG00000036987 349 1.785 - - 0.863 - - 0.922 - - - hyaluronan synthase 2 [Source:ZFIN;Acc:ZDB-GENE-020828-1]
5. CTIF ENSDARG00000090617 270 1.644 - - 0.722 - - 0.922 - - - CBP80/20-dependent translation initiation factor [Source:ZFIN;Acc:ZDB-GENE-130530-1003]
6. btr30 ENSDARG00000102591 506 1.633 - - 0.729 - - 0.904 - - - bloodthirsty-related gene family, member 30 [Source:ZFIN;Acc:ZDB-GENE-040426-1407]
7. CABZ01084007.1 CABZ01084007.1 199 1.593 - - 0.745 - - 0.848 - - -
8. si:ch211-151h10.1 si:ch211-151h10.1 6 1 - - - - 1.000 - - - -
9. SNORA30 SNORA30 1 1 - - - - 1.000 - - - -
10. si:dkey-216e24.5 si:dkey-216e24.5 1 1 - - - - 1.000 - - - -
11. BX465203.2 BX465203.2 23 1 - - - - 1.000 - - - -
12. zgc:66432 zgc:66432 16 1 - - - - 1.000 - - - -
13. adrb1 ENSDARG00000007490, ENSDARG00000115574 9 1 - - - - 1.000 - - - - adrenoceptor beta 1 [Source:ZFIN;Acc:ZDB-GENE-081022-145]
14. BX323793.2 BX323793.2 61 1 - - - - - 1.000 - - -
15. si:dkey-49n23.3 ENSDARG00000095325 4 1 - - - - 1.000 - - - - si:dkey-49n23.3 [Source:ZFIN;Acc:ZDB-GENE-050208-799]
16. RNF224 RNF224 5 1 - - - - 1.000 - - - -
17. cyp2ad2 ENSDARG00000021172 2 1 - - - - 1.000 - - - - cytochrome P450, family 2, subfamily AD, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-020812-2]
18. si:dkey-14o6.10 si:dkey-14o6.10 5 1 - - - - 1.000 - - - -
19. FMNL1 FMNL1 7 1 - - - - 1.000 - - - -
20. BX897747.3_1 BX897747.3_1 1 1 - - - - 1.000 - - - -
21. HELZ2 ENSDARG00000012600 2 1 - - - - 1.000 - - - - helicase with zinc finger 2 [Source:HGNC Symbol;Acc:HGNC:30021]
22. TMEM255B 1 1 - - - - 1.000 - - - - transmembrane protein 255B
23. si:ch211-197g15.5 si:ch211-197g15.5 10 1 - - - - 1.000 - - - -
24. ppapdc1a ppapdc1a 1 1 - - - - 1.000 - - - -
25. FRMPD1_2 FRMPD1_2 2 1 - - - - 1.000 - - - -
26. npnt ENSDARG00000018721 19 1 - - - - 1.000 - - - - nephronectin [Source:ZFIN;Acc:ZDB-GENE-090312-201]
27. AL773596.2 AL773596.2 2 1 - - - - 1.000 - - - -
28. ANKRD27 ENSDARG00000089207 3 1 - - - - 1.000 - - - - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
29. jak3 ENSDARG00000010252 11 1 - - - - 1.000 - - - - Janus kinase 3 (a protein tyrosine kinase, leukocyte) [Source:ZFIN;Acc:ZDB-GENE-070725-4]
30. ENDOD1_2 ENDOD1_2 2 1 - - - - 1.000 - - - -
31. rerglb ENSDARG00000054324, ENSDARG00000116048 14 1 - - - - 1.000 - - - - RERG/RAS-like b [Source:ZFIN;Acc:ZDB-GENE-040724-73]
32. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - 1.000 - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
33. APOH APOH 2 1 - - - - 1.000 - - - -
34. fstl3 ENSDARG00000025670 41 1 - - - - 1.000 - - - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
35. npas4a ENSDARG00000055752 5 1 - - - - 1.000 - - - - neuronal PAS domain protein 4a [Source:ZFIN;Acc:ZDB-GENE-060616-396]
36. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - 1.000 - - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
37. bpnt1 ENSDARG00000043684 78 1 - - - - 1.000 - - - - bisphosphate nucleotidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-46]
38. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - - - 1.000 - - - -
39. CABZ01074647.1 CABZ01074647.1 1 1 - - - - 1.000 - - - -
40. zgc:172014 ENSDARG00000101775 3 1 - - - - 1.000 - - - - zgc:172014 [Source:ZFIN;Acc:ZDB-GENE-080215-22]
41. MFAP4_8 MFAP4_8 1 1 - - - - 1.000 - - - -
42. ZNF70_6 ZNF70_6 15 1 - - - - 1.000 - - - -
43. si:ch73-343l4.3 ENSDARG00000092502 1 1 - - - - 1.000 - - - - si:ch73-343l4.3 [Source:ZFIN;Acc:ZDB-GENE-090313-155]
44. atm_1 ENSDARG00000002385 1 1 - - - - 1.000 - - - - ATM serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-040809-1]
45. CU855711.1 ENSDARG00000088643 6 1 - - - - 1.000 - - - - legumain-like [Source:NCBI gene;Acc:108191752]
46. GPR82 GPR82 127 1 - - - - 1.000 - - - -
47. si:ch73-343l4.6 ENSDARG00000025547, ENSDARG00000095127 1 1 - - - - 1.000 - - - - si:ch73-343l4.6 [Source:ZFIN;Acc:ZDB-GENE-090313-158]
48. si:ch211-244h4.2 si:ch211-244h4.2 1 1 - - - - 1.000 - - - -
49. si:dkey-61f9.2 2 1 - - - - 1.000 - - - - si:dkey-61f9.2
50. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - 1.000 - - - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
51. si:dkey-85k7.12 ENSDARG00000078731 3 1 - - - - 1.000 - - - - si:dkey-85k7.12 [Source:ZFIN;Acc:ZDB-GENE-130530-855]
52. PSMB11_1 PSMB11_1 2 1 - - - - 1.000 - - - -
53. si:dkeyp-46h3.5 ENSDARG00000089515 1 1 - - - - 1.000 - - - - si:dkeyp-46h3.5 [Source:ZFIN;Acc:ZDB-GENE-060503-937]
54. CR384075.2 CR384075.2 1 1 - - - - 1.000 - - - -
55. si:dkey-30g5.2 si:dkey-30g5.2 1 1 - - - - 1.000 - - - -
56. CT573253.1 CT573253.1 4 1 - - - - 1.000 - - - -
57. si:dkey-200c24.1 si:dkey-200c24.1 7 1 - - - - 1.000 - - - -
58. si:ch211-93g21.3 si:ch211-93g21.3 1 1 - - - - 1.000 - - - -
59. CU459012.3 ENSDARG00000109688 1 1 - - - - 1.000 - - - -
60. GABRA2_1 ENSDARG00000113737 5 1 - - - - 1.000 - - - - gamma-aminobutyric acid type A receptor alpha2 subunit [Source:HGNC Symbol;Acc:HGNC:4076]
61. si:ch211-57m13.8 ENSDARG00000078271 1 1 - - - - 1.000 - - - - si:ch211-57m13.8 [Source:ZFIN;Acc:ZDB-GENE-110411-238]
62. si:dkey-40j3.3 ENSDARG00000103597 5 1 - - - - 1.000 - - - - si:dkey-40j3.3 [Source:ZFIN;Acc:ZDB-GENE-110913-109]
63. BX005410.2 BX005410.2 44 1 - - - - 1.000 - - - -
64. hs3st4 ENSDARG00000052648 6 1 - - - - 1.000 - - - - heparan sulfate (glucosamine) 3-O-sulfotransferase 4 [Source:ZFIN;Acc:ZDB-GENE-070202-8]
65. si:ch211-66k16.24 si:ch211-66k16.24 1 1 - - - - 1.000 - - - -
66. Metazoa_SRP_13 Metazoa_SRP_13 7 0.996 - - 0.996 - - - - - -
67. si:ch1073-312b22.1 si:ch1073-312b22.1 6 0.996 - - 0.996 - - - - - -
68. si:dkey-285e18.5 ENSDARG00000093665 5 0.996 - - 0.996 - - - - - - si:dkey-285e18.5 [Source:ZFIN;Acc:ZDB-GENE-120703-44]
69. ENSDARG00000089996 ENSDARG00000089996 17 0.996 - - 0.996 - - - - - -
70. tecrl2a ENSDARG00000089485 12 0.995 - - 0.995 - - - - - - trans-2,3-enoyl-CoA reductase-like 2a [Source:ZFIN;Acc:ZDB-GENE-131121-138]
71. ddx43 ENSDARG00000022614 48 0.995 - - 0.995 - - - - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]
72. radil ENSDARG00000079779 14 0.995 - - 0.995 - - - - - - Ras association and DIL domains [Source:ZFIN;Acc:ZDB-GENE-071206-1]
73. si:ch211-188c16.1 ENSDARG00000077288 16 0.995 - - 0.995 - - - - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
74. crygm2d3 ENSDARG00000088823 1560 0.994 - - - - - 0.994 - - - crystallin, gamma M2d3 [Source:ZFIN;Acc:ZDB-GENE-060918-2]
75. si:ch211-154o6.3_1 ENSDARG00000099846, ENSDARG00000112144 10 0.991 - - 0.991 - - - - - - si:ch211-154o6.3 [Source:ZFIN;Acc:ZDB-GENE-030131-1030]
76. fut7 ENSDARG00000044775 25 0.99 - - 0.990 - - - - - - fucosyltransferase 7 (alpha (1,3) fucosyltransferase) [Source:ZFIN;Acc:ZDB-GENE-060929-997]
77. si:dkey-17e16.18 47 0.989 - - 0.989 - - - - - - si:dkey-17e16.18
78. ppp1r3da ENSDARG00000077513 109 0.987 - - 0.987 - - - - - - protein phosphatase 1, regulatory subunit 3Da [Source:ZFIN;Acc:ZDB-GENE-080204-75]
79. cdc14aa ENSDARG00000013858 18 0.987 - - 0.987 - - - - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
80. wfikkn2b ENSDARG00000059139 45 0.984 - - 0.984 - - - - - - WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-110414-1]
81. MIER3 MIER3 114 0.983 - - - - - 0.983 - - -
82. TEKT4 ENSDARG00000028899 47 0.983 - - 0.983 - - - - - - tektin 4 [Source:ZFIN;Acc:ZDB-GENE-070410-98]
83. CABZ01083815.1 ENSDARG00000105488 4 0.981 - - - - 0.981 - - - -
84. ttc12 ENSDARG00000056896 97 0.98 - - 0.980 - - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
85. gpr55a ENSDARG00000043447 12 0.978 - - - - 0.978 - - - - G protein-coupled receptor 55a [Source:ZFIN;Acc:ZDB-GENE-051113-260]
86. MUC5AC_2 MUC5AC_2 5 0.978 - - - - 0.978 - - - -
87. stx11b.2 ENSDARG00000042231, ENSDARG00000110079 68 0.978 - - 0.978 - - - - - - syntaxin 11b, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-050417-148]
88. CABZ01079981.1 CABZ01079981.1 8 0.978 - - - - 0.978 - - - -
89. CHCHD5 ENSDARG00000091754 35 0.978 - - - - 0.978 - - - - coiled-coil-helix-coiled-coil-helix domain containing 5 [Source:HGNC Symbol;Acc:HGNC:17840]
90. CR848784.2 ENSDARG00000111157 16 0.976 - - - - - 0.976 - - -
91. BX664721.1 ENSDARG00000051804 21 0.976 - - - - - 0.976 - - -
92. CU104716.1 ENSDARG00000109332 12 0.976 - - - - - 0.976 - - -
93. chtopb ENSDARG00000070430 29 0.976 - - - - - 0.976 - - - chromatin target of PRMT1b [Source:ZFIN;Acc:ZDB-GENE-061013-712]
94. CT025771.1 ENSDARG00000117721 13 0.976 - - - - - 0.976 - - -
95. si:ch73-103l1.2 ENSDARG00000096505 17 0.976 - - - - - 0.976 - - - si:ch73-103l1.2 [Source:ZFIN;Acc:ZDB-GENE-121214-226]
96. si:dkey-263l8.2 si:dkey-263l8.2 3 0.976 - - - - - 0.976 - - -
97. si:ch1073-263o8.2 ENSDARG00000090870 66 0.976 - - - - - 0.976 - - - si:ch1073-263o8.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5362]
98. mycbpap ENSDARG00000069194 32 0.976 - - 0.976 - - - - - - mycbp associated protein [Source:ZFIN;Acc:ZDB-GENE-080923-1]
99. myo10l3 ENSDARG00000074143 49 0.976 - - - - - 0.976 - - - myosin X-like 3 [Source:ZFIN;Acc:ZDB-GENE-070912-237]
100. si:dkey-117i10.1 ENSDARG00000062537 3 0.976 - - - - - 0.976 - - - si:dkey-117i10.1 [Source:ZFIN;Acc:ZDB-GENE-091204-371]

There are 714 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA