Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-282j22.3

Gene Name Gene ID Reads Annotation
si:ch211-282j22.3 ENSDARG00000010524 1007 si:ch211-282j22.3 [Source:ZFIN;Acc:ZDB-GENE-091113-49]










Genes with expression patterns similar to si:ch211-282j22.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-282j22.3 ENSDARG00000010524 1007 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-282j22.3 [Source:ZFIN;Acc:ZDB-GENE-091113-49]
2. chmp3 ENSDARG00000038064 577 2.248 - 0.778 - - - 0.766 - 0.704 - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
3. DTX4 ENSDARG00000076302 2642 1.763 - 0.898 - - - 0.865 - - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
4. WDFY3 ENSDARG00000078890 2092 1.685 - - - - - 0.875 0.810 - - WD repeat and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-070705-153]
5. anapc13 ENSDARG00000078435 996 1.682 - 0.775 - - - 0.907 - - - anaphase promoting complex subunit 13 [Source:ZFIN;Acc:ZDB-GENE-091204-298]
6. stk24b ENSDARG00000023878 1054 1.667 - 0.789 - - - - 0.878 - - serine/threonine kinase 24b (STE20 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2841]
7. pik3c3 ENSDARG00000054829 559 1.652 - - - 0.818 - 0.834 - - - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
8. gng2_1 ENSDARG00000056831 113 1.648 - - - 0.775 - 0.873 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
9. spag1a ENSDARG00000004017 1140 1.639 - - - - - 0.876 0.763 - - sperm associated antigen 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9443]
10. atp6ap1a ENSDARG00000041417 898 1.638 - - - 0.780 - 0.858 - - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
11. ubp1 ENSDARG00000018000 1047 1.614 - - - - - 0.913 0.701 - - upstream binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-870]
12. znf592 ENSDARG00000060885 776 1.613 - - - - - 0.908 0.705 - - zinc finger protein 592 [Source:ZFIN;Acc:ZDB-GENE-030131-9613]
13. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.611 - - - - - 0.824 0.787 - - polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
14. phf10 ENSDARG00000070084 1210 1.608 - - - 0.787 - 0.821 - - - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
15. nup210 ENSDARG00000063333 995 1.607 - - - 0.759 - 0.848 - - - nucleoporin 210 [Source:ZFIN;Acc:ZDB-GENE-050208-132]
16. elk1 ENSDARG00000078066 414 1.601 - - - - - 0.890 - 0.711 - ELK1, member of ETS oncogene family [Source:ZFIN;Acc:ZDB-GENE-090529-5]
17. CLIP3 ENSDARG00000054456 734 1.601 - - - 0.720 - 0.881 - - - CAP-GLY domain containing linker protein 3 [Source:ZFIN;Acc:ZDB-GENE-131127-193]
18. exoc6 ENSDARG00000020521 1533 1.599 - - - - - 0.896 0.703 - - exocyst complex component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-2511]
19. prmt7 ENSDARG00000051902, ENSDARG00000113277, ENSDARG00000116251 440 1.598 - 0.788 - - - 0.810 - - - protein arginine methyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1560]
20. si:dkey-100n10.2 101 1.598 - - - 0.774 - 0.824 - - - si:dkey-100n10.2
21. arl16 ENSDARG00000059498, ENSDARG00000110386 229 1.595 - - - - - 0.880 0.715 - - ADP-ribosylation factor-like 16 [Source:ZFIN;Acc:ZDB-GENE-070410-114]
22. ZCCHC2 ENSDARG00000067950 204 1.59 - - - 0.775 - 0.815 - - - zinc finger, CCHC domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070912-269]
23. pdcd10b ENSDARG00000012591 3395 1.588 - - - 0.808 - 0.780 - - - programmed cell death 10b [Source:ZFIN;Acc:ZDB-GENE-040426-2607]
24. trim2b ENSDARG00000076174 250 1.587 - 0.783 - - - 0.804 - - - tripartite motif containing 2b [Source:ZFIN;Acc:ZDB-GENE-090312-70]
25. C19H7orf41 C19H7orf41 2243 1.583 - - - 0.735 - 0.848 - - -
26. edc4 ENSDARG00000062266, ENSDARG00000114070 2505 1.579 - - - 0.794 - - 0.785 - - enhancer of mRNA decapping 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5032]
27. cnot11 ENSDARG00000068596 829 1.576 - - - 0.769 - 0.807 - - - CCR4-NOT transcription complex, subunit 11 [Source:ZFIN;Acc:ZDB-GENE-030131-8068]
28. unc119b ENSDARG00000044362 1528 1.572 - - - 0.721 - 0.851 - - - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
29. gnav1 ENSDARG00000043006 305 1.566 - - - 0.773 - 0.793 - - - guanine nucleotide binding protein (G protein) alpha v1 [Source:ZFIN;Acc:ZDB-GENE-081031-92]
30. srcap ENSDARG00000005236 1740 1.563 - - - - - 0.808 0.755 - - Snf2-related CREBBP activator protein [Source:ZFIN;Acc:ZDB-GENE-041008-127]
31. ARHGAP23 ARHGAP23 3946 1.559 - - - - - 0.807 - 0.752 -
32. zdhhc17 ENSDARG00000070441 1073 1.554 - - - 0.789 - - 0.765 - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
33. appb ENSDARG00000055543, ENSDARG00000109552 4461 1.55 - - - 0.778 - 0.772 - - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
34. acaca ENSDARG00000078512, ENSDARG00000114071 386 1.54 0.724 - - - - 0.816 - - - acetyl-CoA carboxylase alpha [Source:ZFIN;Acc:ZDB-GENE-060526-74]
35. DENND6A DENND6A 648 1.539 - - - - - 0.837 0.702 - -
36. poglut1 ENSDARG00000053463 738 1.534 - - - - - 0.780 0.754 - - protein O-glucosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-051120-24]
37. aftpha ENSDARG00000069249 867 1.53 - 0.795 - 0.735 - - - - - aftiphilin a [Source:ZFIN;Acc:ZDB-GENE-030131-1437]
38. BX000701.2 ENSDARG00000105074 1123 1.53 - - - - - 0.775 0.755 - - gastrula zinc finger protein XlCGF7.1-like [Source:NCBI gene;Acc:101884528]
39. uvrag ENSDARG00000023815 424 1.524 - - - 0.727 - 0.797 - - - UV radiation resistance associated gene [Source:ZFIN;Acc:ZDB-GENE-040426-924]
40. tfdp1b ENSDARG00000016304 3071 1.521 - 0.734 - - - - 0.787 - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
41. npm1b ENSDARG00000037675 5448 1.52 - - - - - 0.789 0.731 - - nucleophosmin 1b [Source:ZFIN;Acc:ZDB-GENE-080723-7]
42. mapk14a ENSDARG00000000857, ENSDARG00000112397 1743 1.517 - - - - - 0.810 0.707 - - mitogen-activated protein kinase 14a [Source:ZFIN;Acc:ZDB-GENE-010202-2]
43. ryk ENSDARG00000007231 1611 1.517 - - - - - 0.802 0.715 - - receptor-like tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-070209-277]
44. DHX36 ENSDARG00000101059 314 1.514 - - - 0.761 - 0.753 - - - DEAH (Asp-Glu-Ala-His) box polypeptide 36 [Source:ZFIN;Acc:ZDB-GENE-050419-20]
45. bcl2_1 bcl2_1 1185 1.509 - 0.791 - 0.718 - - - - -
46. znf710a ENSDARG00000014680 582 1.506 - - - 0.766 - 0.740 - - - zinc finger protein 710a [Source:ZFIN;Acc:ZDB-GENE-030131-5559]
47. TSG101_1 TSG101_1 1215 1.505 - 0.804 - - - - 0.701 - -
48. far1 ENSDARG00000006899 204 1.505 - 0.732 - 0.773 - - - - - fatty acyl CoA reductase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2908]
49. cry2a cry2a 2728 1.505 - 0.745 - - - - 0.760 - -
50. dnajc10 ENSDARG00000074727 1523 1.504 - 0.793 - - - - 0.711 - - DnaJ (Hsp40) homolog, subfamily C, member 10 [Source:ZFIN;Acc:ZDB-GENE-070327-1]
51. actr10 ENSDARG00000038432 1598 1.501 - - - 0.715 - 0.786 - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
52. vps39 ENSDARG00000074471 684 1.497 - - - 0.740 - 0.757 - - - vacuolar protein sorting 39 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-080530-2]
53. trim8b ENSDARG00000060729, ENSDARG00000115043 1528 1.496 - 0.751 - - - - 0.745 - - tripartite motif containing 8b [Source:ZFIN;Acc:ZDB-GENE-030131-4325]
54. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.488 - - - 0.756 - - 0.732 - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
55. med19b ENSDARG00000009472 936 1.488 - - - 0.776 - - 0.712 - - mediator complex subunit 19b [Source:ZFIN;Acc:ZDB-GENE-040727-4]
56. CABZ01051991.1 CABZ01051991.1 346 1.487 - - - 0.756 - 0.731 - - -
57. TEX264 TEX264 283 1.484 - 0.725 - - - 0.759 - - -
58. CABZ01085858.1 CABZ01085858.1 355 1.483 - - - 0.711 - 0.772 - - -
59. st18 663 1.48 - - - 0.746 - 0.734 - - - suppression of tumorigenicity 18, zinc finger
60. dixdc1b ENSDARG00000056267 307 1.476 - - - 0.753 - - 0.723 - - DIX domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-041008-148]
61. DBF4B ENSDARG00000086550 374 1.475 - 0.705 - - - 0.770 - - - DBF4 zinc finger B [Source:ZFIN;Acc:ZDB-GENE-121214-269]
62. nfkb2 ENSDARG00000038687, ENSDARG00000112821 468 1.474 - - - 0.744 - 0.730 - - - nuclear factor of kappa light polypeptide gene enhancer in B-cells 2 (p49/p100) [Source:ZFIN;Acc:ZDB-GENE-030131-6701]
63. CDK5RAP1 ENSDARG00000044925, ENSDARG00000110547, ENSDARG00000112362 390 1.473 - - - 0.715 - 0.758 - - - CDK5 regulatory subunit associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-070424-90]
64. tpbga ENSDARG00000099609 1051 1.469 - 0.701 - 0.768 - - - - - trophoblast glycoprotein a [Source:ZFIN;Acc:ZDB-GENE-030827-4]
65. tdrd3 ENSDARG00000025421 633 1.465 - - - 0.763 - - 0.702 - - tudor domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040426-19]
66. vps45 ENSDARG00000061180 791 1.463 - 0.738 - - - 0.725 - - - vacuolar protein sorting 45 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-526]
67. cwc27 ENSDARG00000043727 690 1.459 - - - 0.739 - - 0.720 - - CWC27 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1118]
68. znf143b ENSDARG00000041581, ENSDARG00000111018, ENSDARG00000112408 1140 1.458 - 0.747 - - - 0.711 - - - zinc finger protein 143b [Source:ZFIN;Acc:ZDB-GENE-040426-1586]
69. rgs20 ENSDARG00000038859 331 1.448 - - - 0.707 - 0.741 - - - regulator of G protein signaling 20 [Source:ZFIN;Acc:ZDB-GENE-040718-128]
70. gipc1 ENSDARG00000104483 2913 1.447 - - - 0.725 - 0.722 - - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
71. bud31 ENSDARG00000017084 3892 1.442 - 0.732 - - - - 0.710 - - BUD31 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040720-3]
72. ubtf ENSDARG00000035066 4070 1.437 - - - - - 0.727 0.710 - - upstream binding transcription factor [Source:ZFIN;Acc:ZDB-GENE-030616-252]
73. kmt2d ENSDARG00000037060 1232 1.435 - - - - - 0.728 0.707 - - lysine (K)-specific methyltransferase 2D [Source:ZFIN;Acc:ZDB-GENE-060223-2]
74. CASK CASK 1750 1.432 - - - 0.725 - 0.707 - - -
75. sumo3a ENSDARG00000028119 13447 1.429 - - - - - 0.700 0.729 - - small ubiquitin-like modifier 3a [Source:ZFIN;Acc:ZDB-GENE-040426-2133]
76. pom121 ENSDARG00000055113 1063 1.428 - 0.717 - 0.711 - - - - - POM121 transmembrane nucleoporin [Source:ZFIN;Acc:ZDB-GENE-030131-6557]
77. smcr7b smcr7b 690 1.427 - 0.710 - 0.717 - - - - -
78. akap6 ENSDARG00000077295 1382 0.949 - - - - - 0.949 - - - A kinase (PRKA) anchor protein 6 [Source:ZFIN;Acc:ZDB-GENE-120207-2]
79. cdk12 ENSDARG00000063726 1220 0.934 - - - - - 0.934 - - - cyclin-dependent kinase 12 [Source:ZFIN;Acc:ZDB-GENE-081104-294]
80. hiat1b ENSDARG00000043055 757 0.933 - - - - - 0.933 - - - hippocampus abundant transcript 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2935]
81. RNF5 ENSDARG00000075606 1730 0.931 - - - - - 0.931 - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
82. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.928 - - - - - 0.928 - - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
83. zdhhc12b ENSDARG00000052787 43 0.923 - - - - - 0.923 - - - zinc finger, DHHC-type containing 12b [Source:ZFIN;Acc:ZDB-GENE-070705-356]
84. AL929252.1 AL929252.1 81 0.919 - - - - - 0.919 - - -
85. CCDC142 ENSDARG00000101377 161 0.919 - - - - - 0.919 - - - coiled-coil domain containing 142 [Source:ZFIN;Acc:ZDB-GENE-030131-6705]
86. si:ch1073-357b18.4 ENSDARG00000096602 121 0.918 - - - - - 0.918 - - - si:ch1073-357b18.4 [Source:ZFIN;Acc:ZDB-GENE-121214-213]
87. ildr2 ENSDARG00000014180 791 0.917 - - - - - 0.917 - - - immunoglobulin-like domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-050706-83]
88. FP102801.1_1 FP102801.1_1 238 0.917 - - - - - 0.917 - - -
89. sqrdl 1598 0.917 - 0.917 - - - - - - - sulfide quinone reductase-like (yeast), transcript variant X2
90. mfhas1 ENSDARG00000079104, ENSDARG00000115162 921 0.917 - - - - - 0.917 - - - malignant fibrous histiocytoma amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-080917-20]
91. rangap1a ENSDARG00000041317 1456 0.917 - - - - - 0.917 - - - RAN GTPase activating protein 1a [Source:ZFIN;Acc:ZDB-GENE-060929-492]
92. si:dkey-270b7.1 si:dkey-270b7.1 83 0.916 - - - - - 0.916 - - -
93. slc25a21 ENSDARG00000060564 344 0.914 - - - - - 0.914 - - - solute carrier family 25 (mitochondrial oxoadipate carrier), member 21 [Source:ZFIN;Acc:ZDB-GENE-060929-664]
94. slc22a2 ENSDARG00000030530 313 0.914 - - - - - 0.914 - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
95. dnaja1l dnaja1l 1536 0.914 - - - - - 0.914 - - -
96. flrt3 ENSDARG00000076895 3516 0.914 - - - - - 0.914 - - - fibronectin leucine rich transmembrane 3 [Source:ZFIN;Acc:ZDB-GENE-030131-1988]
97. fstl3 ENSDARG00000025670 41 0.914 - - - - - 0.914 - - - follistatin-like 3 (secreted glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-050913-111]
98. hoxb7a ENSDARG00000056030 1212 0.914 - - - - - 0.914 - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
99. pdp2 ENSDARG00000058571, ENSDARG00000115915 464 0.914 - - - - - 0.914 - - - putative pyruvate dehydrogenase phosphatase isoenzyme 2 [Source:ZFIN;Acc:ZDB-GENE-000921-2]
100. aig1 ENSDARG00000007171 70 0.913 - - - - - 0.913 - - - androgen-induced 1 (H. sapiens) [Source:ZFIN;Acc:ZDB-GENE-041014-358]

There are 1782 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA