Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-278j3.3

Gene Name Gene ID Reads Annotation
si:ch211-278j3.3 ENSDARG00000020284 478 si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]










Genes with expression patterns similar to si:ch211-278j3.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-278j3.3 ENSDARG00000020284 478 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-278j3.3 [Source:ZFIN;Acc:ZDB-GENE-041014-147]
2. INA INA 950 3.47 - 0.953 - 0.725 - 0.890 0.902 - -
3. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 3.4 0.758 0.805 - - 0.975 - 0.862 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
4. ENSDARG00000086878 ENSDARG00000086878 332 3.234 - - - 0.796 0.985 0.732 - 0.721 -
5. nrn1a ENSDARG00000071860 1311 2.788 - - - - 0.952 0.952 0.884 - - neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
6. slc18a3a ENSDARG00000006356 1285 2.706 - - - - 0.914 0.887 0.905 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
7. adarb1a ENSDARG00000041609 476 2.67 - - - 0.958 - 0.811 0.901 - - adenosine deaminase, RNA-specific, B1a [Source:ZFIN;Acc:ZDB-GENE-000627-2]
8. C7H4orf48 C7H4orf48 1455 2.667 - 0.924 - - - 0.926 0.817 - -
9. gabra5 ENSDARG00000070730 156 2.652 - 0.968 - - - 0.758 0.926 - - gamma-aminobutyric acid (GABA) A receptor, alpha 5 [Source:ZFIN;Acc:ZDB-GENE-081104-30]
10. JPH3 ENSDARG00000102204 283 2.626 - - - - 0.975 0.935 0.716 - - junctophilin 3 [Source:ZFIN;Acc:ZDB-GENE-060503-415]
11. si:dkey-28b4.8 ENSDARG00000002840 1277 2.623 - - - - 0.950 0.815 0.858 - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
12. her8a ENSDARG00000016363 996 2.621 - - - - 0.882 0.913 0.826 - - hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
13. jagn1a ENSDARG00000041071, ENSDARG00000109427 397 2.619 - - - 0.770 - 0.953 0.896 - - jagunal homolog 1a [Source:ZFIN;Acc:ZDB-GENE-041010-80]
14. dmrt3a ENSDARG00000035290, ENSDARG00000114587 115 2.613 - 0.908 - - - 0.849 0.856 - - doublesex and mab-3 related transcription factor 3a [Source:ZFIN;Acc:ZDB-GENE-021220-3]
15. nbeaa ENSDARG00000070080 862 2.567 - 0.858 - - - 0.816 0.893 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
16. CR626962.1 ENSDARG00000096981 220 2.564 - - - - 0.980 0.762 0.822 - -
17. fgf13b ENSDARG00000056633 455 2.553 - 0.815 - - - 0.822 0.916 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
18. rfx4 ENSDARG00000026395, ENSDARG00000116861 2047 2.552 - - - - 0.936 0.904 0.712 - - regulatory factor X, 4 [Source:ZFIN;Acc:ZDB-GENE-040909-2]
19. gad2 ENSDARG00000015537 724 2.548 - - - - 0.974 0.816 0.758 - - glutamate decarboxylase 2 [Source:ZFIN;Acc:ZDB-GENE-030909-9]
20. st8sia5 ENSDARG00000036584 529 2.548 - 0.827 - - - 0.856 0.865 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 [Source:ZFIN;Acc:ZDB-GENE-060322-8]
21. st8sia2 ENSDARG00000018788 2183 2.545 - - - - 0.828 0.858 0.859 - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
22. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.539 - - - - 0.742 0.898 0.899 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
23. hmp19 2554 2.531 0.738 - - - - 0.908 0.885 - - HMP19 protein
24. lrp11 ENSDARG00000034076 313 2.527 0.849 - - - - 0.800 0.878 - - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
25. DTX4 ENSDARG00000076302 2642 2.523 - - - - 0.808 0.859 0.856 - - deltex E3 ubiquitin ligase 4 [Source:HGNC Symbol;Acc:HGNC:29151]
26. cers6 ENSDARG00000053583 247 2.515 - - - - - 0.893 0.883 0.739 - ceramide synthase 6 [Source:ZFIN;Acc:ZDB-GENE-070522-1]
27. nadl1.2 695 2.514 - 0.959 - - - 0.853 0.702 - - neural adhesion molecule L1.2, transcript variant X1
28. prdm12b ENSDARG00000007430 914 2.511 0.711 - - - - 0.875 0.925 - - PR domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-041114-172]
29. cacng8b ENSDARG00000070626 176 2.51 0.710 - - - - 0.885 0.915 - - calcium channel, voltage-dependent, gamma subunit 8b [Source:ZFIN;Acc:ZDB-GENE-100921-72]
30. celf3a ENSDARG00000034668 2432 2.507 - - - - 0.864 0.896 0.747 - - cugbp, Elav-like family member 3a [Source:ZFIN;Acc:ZDB-GENE-000501-2]
31. ppp3ca ENSDARG00000004988 615 2.507 - 0.738 - - - 0.884 0.885 - - protein phosphatase 3, catalytic subunit, alpha isozyme [Source:ZFIN;Acc:ZDB-GENE-091113-24]
32. rab6bb ENSDARG00000031343 1381 2.498 - 0.877 - - - 0.813 0.808 - - RAB6B, member RAS oncogene family b [Source:ZFIN;Acc:ZDB-GENE-050320-28]
33. adam11 ENSDARG00000079204 298 2.491 - 0.873 - - - 0.733 0.885 - - ADAM metallopeptidase domain 11 [Source:ZFIN;Acc:ZDB-GENE-070808-3]
34. nrarpb ENSDARG00000018958 6225 2.487 0.701 - - - - 0.883 0.903 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
35. cdk5r1b ENSDARG00000045087 2075 2.48 - 0.731 - - - 0.868 0.881 - - cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
36. atp6ap1a ENSDARG00000041417 898 2.477 - 0.834 - - - 0.868 0.775 - - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
37. thsd7ba ENSDARG00000095022 231 2.462 - - - - - 0.777 0.880 0.805 - thrombospondin, type I, domain containing 7Ba [Source:ZFIN;Acc:ZDB-GENE-070621-2]
38. ppp2r2ba 321 2.456 - - - 0.900 - 0.761 - 0.795 - protein phosphatase 2, regulatory subunit B, beta a, transcript variant X2
39. cldn19 ENSDARG00000044569 281 2.446 - 0.917 - - - 0.758 0.771 - - claudin 19 [Source:ZFIN;Acc:ZDB-GENE-050417-242]
40. snap25b ENSDARG00000058117 469 2.445 - - - - - 0.771 0.886 0.788 - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
41. adcyap1b ENSDARG00000027740 1539 2.437 - 0.816 - - - 0.842 0.779 - - adenylate cyclase activating polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-041010-89]
42. rdh12 ENSDARG00000018069 396 2.435 - - - 0.736 - 0.808 0.891 - - retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
43. spock3 ENSDARG00000070266, ENSDARG00000110158 934 2.435 - - - 0.715 - 0.903 0.817 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3 [Source:ZFIN;Acc:ZDB-GENE-090311-24]
44. wasf3 wasf3 3287 2.433 - - - - 0.874 0.844 0.715 - -
45. her15.2 her15.2 1701 2.432 - - - - 0.738 0.884 0.810 - -
46. pcp4b 1080 2.42 - - - 0.742 - 0.742 0.936 - - Purkinje cell protein 4b
47. lrrc4.1 ENSDARG00000069402 323 2.416 0.721 - - - - 0.810 0.885 - - leucine rich repeat containing 4.1 [Source:ZFIN;Acc:ZDB-GENE-041210-129]
48. nell2b ENSDARG00000062797 854 2.413 0.729 - - - - 0.774 0.910 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
49. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.407 0.721 - - - - 0.781 0.905 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
50. flrt1b ENSDARG00000075597 465 2.377 0.725 - - - - 0.916 0.736 - - fibronectin leucine rich transmembrane protein 1b [Source:ZFIN;Acc:ZDB-GENE-080327-6]
51. mtss1l mtss1l 2494 2.375 - 0.802 - - 0.846 - 0.727 - -
52. her4.1 ENSDARG00000056732 1264 2.372 0.708 - - - - 0.840 0.824 - - hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
53. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.35 0.722 - - - - 0.835 0.793 - - ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
54. atpv0e2 ENSDARG00000059057 585 2.348 - - - - - 0.763 0.784 0.801 - ATPase H+ transporting V0 subunit e2 [Source:ZFIN;Acc:ZDB-GENE-050522-135]
55. SEZ6 SEZ6 262 2.319 0.719 - - - - 0.729 0.871 - -
56. pisd ENSDARG00000052462, ENSDARG00000110128 463 2.313 - - - 0.817 - - 0.728 0.768 - phosphatidylserine decarboxylase [Source:ZFIN;Acc:ZDB-GENE-061215-46]
57. ric8a ENSDARG00000007247 229 2.303 - - - - - 0.751 0.809 0.743 - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
58. kcnj11l ENSDARG00000031438 369 2.298 - 0.703 - - - 0.755 0.840 - - potassium inwardly-rectifying channel, subfamily J, member 11, like [Source:ZFIN;Acc:ZDB-GENE-050222-2]
59. CT030046.1 CT030046.1 190 2.282 - - - - - 0.805 0.747 0.730 -
60. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.276 - - - - - 0.822 0.722 0.732 - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
61. b4galt2 ENSDARG00000077994 480 2.255 0.728 - - 0.727 - 0.800 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-070912-258]
62. prph ENSDARG00000028306 242 2.246 0.717 - - - - 0.743 0.786 - - peripherin [Source:ZFIN;Acc:ZDB-GENE-990415-207]
63. gpm6ba ENSDARG00000005739, ENSDARG00000110895 1177 2.21 - 0.729 - 0.722 - 0.759 - - - glycoprotein M6Ba [Source:ZFIN;Acc:ZDB-GENE-030710-9]
64. ccdc28b ENSDARG00000011222 528 2.159 0.704 - - - - 0.728 0.727 - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
65. zgc:114130 ENSDARG00000040725, ENSDARG00000116854 806 1.908 - - - - 0.969 0.939 - - - zgc:114130 [Source:ZFIN;Acc:ZDB-GENE-050913-48]
66. si:dkey-183n20.2 si:dkey-183n20.2 210 1.897 - - - 0.924 0.973 - - - -
67. nr1d4b ENSDARG00000059370 243 1.878 - 0.942 - 0.936 - - - - - nuclear receptor subfamily 1, group D, member 4b [Source:ZFIN;Acc:ZDB-GENE-080403-6]
68. anxa13l ENSDARG00000013613 631 1.864 - - - - 0.973 0.891 - - - annexin A13, like [Source:ZFIN;Acc:ZDB-GENE-050522-310]
69. gfap ENSDARG00000025301 5584 1.861 - - - - - 0.940 0.921 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
70. sypa ENSDARG00000042974, ENSDARG00000110528 3217 1.853 - - - - - 0.924 0.929 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
71. mycla ENSDARG00000006003 1866 1.853 - - - - 0.974 - 0.879 - - MYCL proto-oncogene, bHLH transcription factor a [Source:ZFIN;Acc:ZDB-GENE-040426-2439]
72. CR384099.1 ENSDARG00000089193 193 1.849 - - - - - 0.968 0.881 - -
73. atp6v0a2a ENSDARG00000035538 278 1.845 - - - - - 0.949 0.896 - - ATPase H+ transporting V0 subunit a2a [Source:ZFIN;Acc:ZDB-GENE-091113-4]
74. rab3ab ENSDARG00000043835 1267 1.843 - - - - - 0.912 0.931 - - RAB3A, member RAS oncogene family, b [Source:ZFIN;Acc:ZDB-GENE-041210-268]
75. BX957337.1 BX957337.1 1685 1.842 - - - - - 0.953 0.889 - -
76. mapk12b ENSDARG00000006409 2246 1.835 - - - - - 0.918 0.917 - - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]
77. sncgb ENSDARG00000109715 1014 1.835 - - - - - 0.930 0.905 - - synuclein, gamma b (breast cancer-specific protein 1) [Source:ZFIN;Acc:ZDB-GENE-050522-235]
78. aldocb ENSDARG00000019702 2111 1.835 - - - - - 0.938 0.897 - - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
79. ndrg4 ENSDARG00000103937 1234 1.83 - - - - - 0.931 0.899 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
80. AKT3 AKT3 1729 1.83 - - - - - 0.934 0.896 - -
81. stx1b ENSDARG00000000503 2724 1.828 - - - - - 0.906 0.922 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
82. si:ch73-21g5.7 ENSDARG00000093156 9412 1.828 - - - - - 0.924 0.904 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
83. ROBO3_1 ROBO3_1 468 1.828 - - - - - 0.921 0.907 - -
84. stxbp1a ENSDARG00000001994 5154 1.828 - - - - - 0.908 0.920 - - syntaxin binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-050626-106]
85. cadm3 ENSDARG00000057013 1545 1.826 - - - - - 0.927 0.899 - - cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
86. mn1b ENSDARG00000079248 882 1.824 - - - - 0.947 0.877 - - - meningioma 1b [Source:ZFIN;Acc:ZDB-GENE-080917-23]
87. znf511 ENSDARG00000000760 446 1.822 - 0.880 - - 0.942 - - - - zinc finger protein 511 [Source:ZFIN;Acc:ZDB-GENE-030616-621]
88. sez6l2 ENSDARG00000076052 360 1.822 - - - - - 0.885 0.937 - - seizure related 6 homolog (mouse)-like 2 [Source:ZFIN;Acc:ZDB-GENE-091204-189]
89. notch1b ENSDARG00000052094 7874 1.822 - - - - - 0.934 0.888 - - notch 1b [Source:ZFIN;Acc:ZDB-GENE-990415-183]
90. gng3 ENSDARG00000009553 2530 1.821 - - - - 0.927 - 0.894 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
91. tuba1c ENSDARG00000055216 8384 1.82 - - - - - 0.914 0.906 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
92. plp1a ENSDARG00000103732 3544 1.817 - - - - - 0.925 0.892 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
93. tuba2 ENSDARG00000045014 1490 1.816 - - - - - 0.940 0.876 - - tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
94. si:ch211-11c15.3 si:ch211-11c15.3 1279 1.811 - - - - - 0.911 0.900 - -
95. atp6v1b2 ENSDARG00000043465, ENSDARG00000113422 682 1.809 - - - - - 0.936 0.873 - - ATPase H+ transporting V1 subunit B2 [Source:ZFIN;Acc:ZDB-GENE-030711-4]
96. SEMA7A ENSDARG00000078707 465 1.809 - - - - - 0.924 0.885 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
97. KIF1A KIF1A 1686 1.807 - 0.901 - - - - 0.906 - -
98. syt11a ENSDARG00000057913 1145 1.806 - - - - - 0.945 0.861 - - synaptotagmin XIa [Source:ZFIN;Acc:ZDB-GENE-040426-2815]
99. pcdh1gc5 ENSDARG00000104826 10052 1.806 - - - - - 0.921 0.885 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
100. mettl21a ENSDARG00000012051 86 1.806 - 0.870 - 0.936 - - - - - methyltransferase like 21A [Source:ZFIN;Acc:ZDB-GENE-050320-145]

There are 2722 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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