Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-276k2.2

Gene Name Gene ID Reads Annotation
si:ch211-276k2.2 4 si:ch211-276k2.2










Genes with expression patterns similar to si:ch211-276k2.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-276k2.2 4 4 - - 1.000 1.000 1.000 - - - 1.000 si:ch211-276k2.2
2. zgc:171759_1 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 1 2 - - 1.000 - - - - - 1.000 zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
3. tyro3 ENSDARG00000005356 4 2 - - 1.000 - - - - - 1.000 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
4. epm2a ENSDARG00000059044 10 1.987 - - - - 0.987 - - - 1.000 epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
5. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1.889 - - 0.889 - 1.000 - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
6. nup85 ENSDARG00000098679 2 1.837 - - 1.000 - - - - - 0.837 nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
7. ms4a17a.1 ENSDARG00000043798 7 1.72 - - 0.720 1.000 - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
8. zgc:114037_5 6 1.717 - - 1.000 - - - - - 0.717 zgc:114037
9. trh ENSDARG00000006868 31 1.71 - - 0.950 0.760 - - - - - thyrotropin-releasing hormone [Source:ZFIN;Acc:ZDB-GENE-020930-1]
10. CR450686.1 ENSDARG00000091230 2 1.668 - - - 0.965 - - - - 0.703
11. BX530409.1 BX530409.1 65 1.58 - - - 0.766 0.814 - - - -
12. tbr1a ENSDARG00000076259 341 1.489 - - - 0.709 - - - - 0.780 T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
13. HTRA2_8 HTRA2_8 0 1 - - 1.000 - - - - - -
14. BX000981.1 ENSDARG00000092940 1 1 - - - - - - - - 1.000
15. CT025887.1 ENSDARG00000114574 1 1 - - - - - - - - 1.000 uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
16. trim35-24 ENSDARG00000099684, ENSDARG00000114154 4 1 - - - - - - - - 1.000 tripartite motif containing 35-24 [Source:ZFIN;Acc:ZDB-GENE-060421-8366]
17. si:ch211-232k18.2 si:ch211-232k18.2 2 1 - - - - - - - - 1.000
18. FHDC1 ENSDARG00000074812 2 1 - - 1.000 - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
19. NOX5 ENSDARG00000079773 0 1 - - - - - - - - 1.000 NADPH oxidase, EF-hand calcium binding domain 5 [Source:ZFIN;Acc:ZDB-GENE-091120-9]
20. ifnphi1 ENSDARG00000025607 6 1 - - - - 1.000 - - - - interferon phi 1 [Source:ZFIN;Acc:ZDB-GENE-030721-3]
21. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - - - - 1.000
22. si:ch211-274f20.4 si:ch211-274f20.4 0 1 - - 1.000 - - - - - -
23. CU367845.1_1 CU367845.1_1 43 1 - - - 1.000 - - - - -
24. si:dkey-240h12.3 ENSDARG00000095458 7 1 - - - - 1.000 - - - - si:dkey-240h12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-405]
25. tusc3 ENSDARG00000078854 4 1 - - 1.000 - - - - - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
26. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 1 - - 1.000 - - - - - - si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
27. fn3krp ENSDARG00000098208 4 1 - - 1.000 - - - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
28. si:dkey-16j24.1 2 1 - - 1.000 - - - - - - si:dkey-16j24.1, transcript variant X1
29. OGFR ENSDARG00000037837 4 1 - - - - - - - - 1.000 opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
30. ZNF70_7 ZNF70_7 0 1 - - 1.000 - - - - - -
31. KCNJ3_1 KCNJ3_1 30 1 - - 1.000 - - - - - -
32. si:dkey-26i24.1 ENSDARG00000102673 4 1 - - 1.000 - - - - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
33. si:dkey-254e13.13 si:dkey-254e13.13 6 1 - - - 1.000 - - - - -
34. si:dkeyp-85d8.5 ENSDARG00000103346 3 1 - - 1.000 - - - - - - si:dkeyp-85d8.5 [Source:ZFIN;Acc:ZDB-GENE-110913-144]
35. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - 1.000 - - - - - -
36. abhd10a ENSDARG00000076435 3 1 - - 1.000 - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
37. FP340264.1 FP340264.1 0 1 - - 1.000 - - - - - -
38. ppef1 ENSDARG00000020191 1 1 - - - - - - - - 1.000 protein phosphatase, EF-hand calcium binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-080303-27]
39. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 1 - - 1.000 - - - - - -
40. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - - - - - 1.000 secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
41. bricd5 ENSDARG00000056247 1 1 - - 1.000 - - - - - - BRICHOS domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-050208-85]
42. RIMS2 RIMS2 2 1 - - - - - - - - 1.000
43. nog3 ENSDARG00000053528, ENSDARG00000116141, ENSDARG00000116361 1 1 - - 1.000 - - - - - - noggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
44. GBE1 GBE1 12 1 - - - - - - - - 1.000
45. si:dkey-80c24.5 ENSDARG00000092501 6 1 - - - - - - - - 1.000 si:dkey-80c24.5 [Source:ZFIN;Acc:ZDB-GENE-061207-73]
46. CABZ01079302.1 ENSDARG00000103230 2 1 - - 1.000 - - - - - -
47. CR318624.1 ENSDARG00000094618 5 1 - - - 1.000 - - - - -
48. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - - - 1.000
49. OTUD7A ENSDARG00000045556 1 1 - - - - - - - - 1.000 OTU deubiquitinase 7A [Source:HGNC Symbol;Acc:HGNC:20718]
50. gabra3 ENSDARG00000090883 0 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
51. pcdh2g5 1 1 - - 1.000 - - - - - - protocadherin 2 gamma 5
52. dlg3 ENSDARG00000076796, ENSDARG00000111101 2 1 - - 1.000 - - - - - - discs, large homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050208-93]
53. ccbl2 4 1 - - - - - - - - 1.000 cysteine conjugate-beta lyase 2, transcript variant X4
54. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - 1.000 - - - - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
55. CACNA2D1_1 ENSDARG00000073752 2 1 - - 1.000 - - - - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
56. CR381673.1 ENSDARG00000098337 7 1 - - - - - - - - 1.000
57. aqp8a.2 ENSDARG00000071592, ENSDARG00000113224 7 1 - - - 1.000 - - - - - aquaporin 8a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-070112-1802]
58. ved ENSDARG00000102389 0 1 - - - - - - - - 1.000 ventrally expressed dharma/bozozok antagonist [Source:ZFIN;Acc:ZDB-GENE-030813-1]
59. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - - - - 1.000
60. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - 1.000 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
61. tacr3a ENSDARG00000075112 1 1 - - - 1.000 - - - - - tachykinin receptor 3a [Source:ZFIN;Acc:ZDB-GENE-090312-106]
62. si:dkey-148a12.2 si:dkey-148a12.2 1 1 - - 1.000 - - - - - -
63. 5S_rRNA_19 5S_rRNA_19 1 1 - - 1.000 - - - - - -
64. BX119910.13 BX119910.13 4 1 - - 1.000 - - - - - -
65. BX323023.1 BX323023.1 1 1 - - - - - - - - 1.000
66. pip4k2ab ENSDARG00000063544 1 1 - - - - - - - - 1.000 phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]
67. FAM163A_1 ENSDARG00000093021 6 1 - - - - - - - - 1.000 family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
68. sowahca ENSDARG00000098790 1 1 - - - - - - - - 1.000 sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
69. EXT1_1 EXT1_1 3 1 - - - - - - - - 1.000
70. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - 1.000 - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
71. SNORA65 SNORA65 1 1 - - 1.000 - - - - - -
72. U5_4 U5_4 1 1 - - - - - - - - 1.000
73. si:dkey-177p2.15p si:dkey-177p2.15p 20 1 - - 1.000 - - - - - -
74. si:ch211-278f21.5 si:ch211-278f21.5 1 1 - - - 1.000 - - - - -
75. sh2d4b sh2d4b 1 1 - - 1.000 - - - - - -
76. CU596012.1 CU596012.1 24 1 - - - - - - - - 1.000
77. cabp7b ENSDARG00000060846 5 1 - - 1.000 - - - - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
78. si:dkey-60b12.9 si:dkey-60b12.9 3 1 - - - - 1.000 - - - -
79. mgat4c ENSDARG00000041791, ENSDARG00000109972 0 1 - - - - - - - - 1.000 mgat4 family member C [Source:ZFIN;Acc:ZDB-GENE-091204-429]
80. TNPO1 ENSDARG00000035390 1 1 - - - - - - - - 1.000 transportin 1 [Source:ZFIN;Acc:ZDB-GENE-080819-1]
81. CR548630.2 CR548630.2 1 1 - - 1.000 - - - - - -
82. plekha7b ENSDARG00000062220, ENSDARG00000110462 11 1 - - 1.000 - - - - - - pleckstrin homology domain containing, family A member 7b [Source:ZFIN;Acc:ZDB-GENE-091014-2]
83. si:dkey-233h12.2 si:dkey-233h12.2 1 1 - - - - - - - - 1.000
84. CR626884.3 ENSDARG00000104648 1 1 - - 1.000 - - - - - -
85. si:dkey-25o1.5 si:dkey-25o1.5 5 1 - - - - - - - - 1.000
86. STRC ENSDARG00000105391 10 1 - - 1.000 - - - - - - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
87. si:ch211-208f21.4 si:ch211-208f21.4 4 1 - - - - - - - - 1.000
88. RASAL1 0 1 - - 1.000 - - - - - - RAS protein activator like 1
89. si:dkey-4m13.3 6 1 - - - 1.000 - - - - - si:dkey-4m13.3
90. si:ch211-181l5.5 si:ch211-181l5.5 0 1 - - 1.000 - - - - - -
91. kcnf1b ENSDARG00000027285 2 1 - - - 1.000 - - - - - potassium voltage-gated channel, subfamily F, member 1b [Source:ZFIN;Acc:ZDB-GENE-090312-39]
92. zgc:174311 zgc:174311 3 1 - - 1.000 - - - - - -
93. si:ch211-81g2.1 si:ch211-81g2.1 5 1 - - - 1.000 - - - - -
94. iffo2a ENSDARG00000062101, ENSDARG00000111078 0 1 - - 1.000 - - - - - - intermediate filament family orphan 2a [Source:ZFIN;Acc:ZDB-GENE-090313-342]
95. irbp 2 1 - - - 1.000 - - - - - interphotoreceptor retinoid-binding protein, transcript variant X2
96. si:dkey-164k14.1 si:dkey-164k14.1 5 1 - - 1.000 - - - - - -
97. CUZD1 CUZD1 2 1 - - - 1.000 - - - - -
98. RNF207 RNF207 9 1 - - - - - - - - 1.000
99. ZNF337_19 ZNF337_19 3 1 - - - - - - - - 1.000
100. CU138503.2 CU138503.2 0 1 - - 1.000 - - - - - -

There are 398 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA