Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-276k2.2

Gene Name Gene ID Reads Annotation
si:ch211-276k2.2 4 si:ch211-276k2.2










Genes with expression patterns similar to si:ch211-276k2.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-276k2.2 4 4 - - 1.000 1.000 1.000 - - - 1.000 si:ch211-276k2.2
2. tyro3 ENSDARG00000005356 4 2 - - 1.000 - - - - - 1.000 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
3. zgc:171759_1 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 1 2 - - 1.000 - - - - - 1.000 zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
4. epm2a ENSDARG00000059044 10 1.987 - - - - 0.987 - - - 1.000 epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
5. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1.889 - - 0.889 - 1.000 - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
6. nup85 ENSDARG00000098679 2 1.837 - - 1.000 - - - - - 0.837 nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
7. ms4a17a.1 ENSDARG00000043798 7 1.72 - - 0.720 1.000 - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
8. zgc:114037_5 6 1.717 - - 1.000 - - - - - 0.717 zgc:114037
9. trh ENSDARG00000006868 31 1.71 - - 0.950 0.760 - - - - - thyrotropin-releasing hormone [Source:ZFIN;Acc:ZDB-GENE-020930-1]
10. CR450686.1 ENSDARG00000091230 2 1.668 - - - 0.965 - - - - 0.703
11. BX530409.1 BX530409.1 65 1.58 - - - 0.766 0.814 - - - -
12. tbr1a ENSDARG00000076259 341 1.489 - - - 0.709 - - - - 0.780 T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
13. RASAL1 0 1 - - 1.000 - - - - - - RAS protein activator like 1
14. si:rp71-20i5.5 si:rp71-20i5.5 9 1 - - 1.000 - - - - - -
15. wu:fe11b02_1 wu:fe11b02_1 7 1 - - - - - - - - 1.000
16. kcnf1b ENSDARG00000027285 2 1 - - - 1.000 - - - - - potassium voltage-gated channel, subfamily F, member 1b [Source:ZFIN;Acc:ZDB-GENE-090312-39]
17. BX682234.2 BX682234.2 28 1 - - - - - - - - 1.000
18. GARNL3 GARNL3 1 1 - - 1.000 - - - - - -
19. SRCRB4D SRCRB4D 4 1 - - - - 1.000 - - - -
20. BX323023.1 BX323023.1 1 1 - - - - - - - - 1.000
21. si:dkey-26i24.1 ENSDARG00000102673 4 1 - - 1.000 - - - - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
22. pcdh2g5 1 1 - - 1.000 - - - - - - protocadherin 2 gamma 5
23. si:dkey-246e1.1 si:dkey-246e1.1 1 1 - - - - - - - - 1.000
24. FGFBP1 FGFBP1 7 1 - - 1.000 - - - - - -
25. trpc2 trpc2 10 1 - - - 1.000 - - - - -
26. SNORA35 SNORA35 0 1 - - - - - - - - 1.000
27. CABZ01087946.1 CABZ01087946.1 2 1 - - - - - - - - 1.000
28. STOX2 STOX2 0 1 - - 1.000 - - - - - -
29. gabra3 ENSDARG00000090883 0 1 - - 1.000 - - - - - - gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
30. ccbl2 4 1 - - - - - - - - 1.000 cysteine conjugate-beta lyase 2, transcript variant X4
31. gata2b ENSDARG00000009094 16 1 - - 1.000 - - - - - - GATA binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-040718-440]
32. BX572103.3 BX572103.3 0 1 - - 1.000 - - - - - -
33. si:ch211-128b10.5 si:ch211-128b10.5 3 1 - - - 1.000 - - - - -
34. sh2d4b sh2d4b 1 1 - - 1.000 - - - - - -
35. si:dkey-192k22.2 ENSDARG00000095111 4 1 - - - - - - - - 1.000 si:dkey-192k22.2 [Source:ZFIN;Acc:ZDB-GENE-090313-219]
36. INPP5A 1 1 - - 1.000 - - - - - - inositol polyphosphate-5-phosphatase A
37. si:dkey-233h12.2 si:dkey-233h12.2 1 1 - - - - - - - - 1.000
38. BX000981.1 ENSDARG00000092940 1 1 - - - - - - - - 1.000
39. CU367845.1_1 CU367845.1_1 43 1 - - - 1.000 - - - - -
40. sox32 ENSDARG00000100591 2 1 - - 1.000 - - - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
41. pcdh2g12 5 1 - - 1.000 - - - - - - protocadherin 2 gamma 12
42. KCNJ3_1 KCNJ3_1 30 1 - - 1.000 - - - - - -
43. si:dkey-191j3.2 ENSDARG00000101997 1 1 - - 1.000 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
44. si:ch211-178j18.2 si:ch211-178j18.2 1 1 - - 1.000 - - - - - -
45. mir124-1 10 1 - - 1.000 - - - - - - microRNA 124-1
46. si:dkey-65b12.12 ENSDARG00000094458 26 1 - - - - - - - - 1.000 si:dkey-65b12.12 [Source:ZFIN;Acc:ZDB-GENE-060526-325]
47. si:dkey-165g20.2 si:dkey-165g20.2 3 1 - - 1.000 - - - - - -
48. FAM163A_1 ENSDARG00000093021 6 1 - - - - - - - - 1.000 family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
49. rac1l ENSDARG00000054649, ENSDARG00000096549 2 1 - - 1.000 - - - - - - Rac family small GTPase 1, like [Source:ZFIN;Acc:ZDB-GENE-060315-6]
50. CT573264.3 CT573264.3 0 1 - - - - - - - - 1.000
51. si:ch211-202m22.1 ENSDARG00000094491 24 1 - - 1.000 - - - - - - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
52. asf1ba_1 ENSDARG00000101037 3 1 - - - - - - - - 1.000 anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
53. CRYGM4 ENSDARG00000008219 1 1 - - - 1.000 - - - - - crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
54. wibg wibg 2 1 - - - - - - - - 1.000
55. 5S_rRNA_10 5S_rRNA_10 2 1 - - 1.000 - - - - - -
56. ralgps1 ENSDARG00000068370 39 1 - - 1.000 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
57. si:ch211-196h16.4 ENSDARG00000094782 0 1 - - 1.000 - - - - - - si:ch211-196h16.4 [Source:ZFIN;Acc:ZDB-GENE-081029-1]
58. si:dkey-14i17.1 si:dkey-14i17.1 1 1 - - 1.000 - - - - - -
59. ppef1 ENSDARG00000020191 1 1 - - - - - - - - 1.000 protein phosphatase, EF-hand calcium binding domain 1 [Source:ZFIN;Acc:ZDB-GENE-080303-27]
60. sowahca ENSDARG00000098790 1 1 - - - - - - - - 1.000 sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
61. OGFR ENSDARG00000037837 4 1 - - - - - - - - 1.000 opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
62. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 1 - - 1.000 - - - - - - si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
63. si:dkeyp-117h8.10 si:dkeyp-117h8.10 16 1 - - 1.000 - - - - - -
64. CU596012.1 CU596012.1 24 1 - - - - - - - - 1.000
65. ZNF337_19 ZNF337_19 3 1 - - - - - - - - 1.000
66. SNORA65 SNORA65 1 1 - - 1.000 - - - - - -
67. CR855307.2 CR855307.2 1 1 - - 1.000 - - - - - -
68. STRC ENSDARG00000105391 10 1 - - 1.000 - - - - - - stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
69. CUZD1 CUZD1 2 1 - - - 1.000 - - - - -
70. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 1 - - 1.000 - - - - - -
71. si:dkey-199m13.3 si:dkey-199m13.3 2 1 - - - - - - - - 1.000
72. CU138503.2 CU138503.2 0 1 - - 1.000 - - - - - -
73. nyx ENSDARG00000061791 2 1 - - - 1.000 - - - - - nyctalopin [Source:ZFIN;Acc:ZDB-GENE-061026-3]
74. CU468041.1 ENSDARG00000092125 1 1 - - 1.000 - - - - - -
75. si:ch211-81g2.1 si:ch211-81g2.1 5 1 - - - 1.000 - - - - -
76. dmc1 ENSDARG00000055883, ENSDARG00000110457 5 1 - - - - - - - - 1.000 DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GENE-060331-93]
77. pip4k2ab ENSDARG00000063544 1 1 - - - - - - - - 1.000 phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]
78. iffo2a ENSDARG00000062101, ENSDARG00000111078 0 1 - - 1.000 - - - - - - intermediate filament family orphan 2a [Source:ZFIN;Acc:ZDB-GENE-090313-342]
79. prdm2a ENSDARG00000090721 11 1 - - - - 1.000 - - - - PR domain containing 2, with ZNF domain a [Source:ZFIN;Acc:ZDB-GENE-081104-139]
80. gucy2f ENSDARG00000025504 6 1 - - - 1.000 - - - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
81. PLCH2 PLCH2 3 1 - - - 1.000 - - - - -
82. si:dkey-4p15.5 ENSDARG00000086272 7 1 - - 1.000 - - - - - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
83. syne2a_1 0 1 - - 1.000 - - - - - - spectrin repeat containing, nuclear envelope 2a
84. CR356247.1 CR356247.1 2 1 - - 1.000 - - - - - -
85. si:ch211-210m1.3 si:ch211-210m1.3 2 1 - - - 1.000 - - - - -
86. fn3krp ENSDARG00000098208 4 1 - - 1.000 - - - - - - fructosamine 3 kinase related protein [Source:ZFIN;Acc:ZDB-GENE-041010-192]
87. si:ch211-201b11.3 si:ch211-201b11.3 2 1 - - 1.000 - - - - - -
88. bmp15 ENSDARG00000037491 16 1 - - - - - - - - 1.000 bone morphogenetic protein 15 [Source:ZFIN;Acc:ZDB-GENE-030131-6115]
89. GRINA GRINA 12 1 - - - - - - - - 1.000
90. U1_7 U1_7 0 1 - - 1.000 - - - - - -
91. BX927253.1 ENSDARG00000096072 1 1 - - 1.000 - - - - - -
92. sobpb ENSDARG00000017386 0 1 - - - - - - - - 1.000 sine oculis binding protein homolog (Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-041210-8]
93. abcg2a ENSDARG00000100075 2 1 - - 1.000 - - - - - - ATP-binding cassette, sub-family G (WHITE), member 2a [Source:ZFIN;Acc:ZDB-GENE-050517-35]
94. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - 1.000 - - - - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
95. nudt13 ENSDARG00000057417, ENSDARG00000115835 46 1 - - 1.000 - - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
96. CT025887.1 ENSDARG00000114574 1 1 - - - - - - - - 1.000 uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
97. lsm10 5 1 - - - - - - - - 1.000 LSM10, U7 small nuclear RNA associated
98. trim35-24 ENSDARG00000099684, ENSDARG00000114154 4 1 - - - - - - - - 1.000 tripartite motif containing 35-24 [Source:ZFIN;Acc:ZDB-GENE-060421-8366]
99. FP340264.1 FP340264.1 0 1 - - 1.000 - - - - - -
100. slc5a5 ENSDARG00000005392 6 1 - - - 1.000 - - - - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]

There are 398 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA