Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-276k2.2

Gene Name Gene ID Reads Annotation
si:ch211-276k2.2 4 si:ch211-276k2.2










Genes with expression patterns similar to si:ch211-276k2.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-276k2.2 4 4 - - 1.000 1.000 1.000 - - - 1.000 si:ch211-276k2.2
2. zgc:171759_1 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 1 2 - - 1.000 - - - - - 1.000 zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
3. tyro3 ENSDARG00000005356 4 2 - - 1.000 - - - - - 1.000 TYRO3 protein tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-990714-13]
4. epm2a ENSDARG00000059044 10 1.987 - - - - 0.987 - - - 1.000 epilepsy, progressive myoclonus type 2A, Lafora disease (laforin) [Source:ZFIN;Acc:ZDB-GENE-100922-143]
5. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1.889 - - 0.889 - 1.000 - - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
6. nup85 ENSDARG00000098679 2 1.837 - - 1.000 - - - - - 0.837 nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
7. ms4a17a.1 ENSDARG00000043798 7 1.72 - - 0.720 1.000 - - - - - membrane-spanning 4-domains, subfamily A, member 17A.1 [Source:ZFIN;Acc:ZDB-GENE-050417-307]
8. zgc:114037_5 6 1.717 - - 1.000 - - - - - 0.717 zgc:114037
9. trh ENSDARG00000006868 31 1.71 - - 0.950 0.760 - - - - - thyrotropin-releasing hormone [Source:ZFIN;Acc:ZDB-GENE-020930-1]
10. CR450686.1 ENSDARG00000091230 2 1.668 - - - 0.965 - - - - 0.703
11. BX530409.1 BX530409.1 65 1.58 - - - 0.766 0.814 - - - -
12. tbr1a ENSDARG00000076259 341 1.489 - - - 0.709 - - - - 0.780 T-box, brain, 1a [Source:ZFIN;Acc:ZDB-GENE-060810-93]
13. 5S_rRNA_19 5S_rRNA_19 1 1 - - 1.000 - - - - - -
14. si:ch211-181l5.5 si:ch211-181l5.5 0 1 - - 1.000 - - - - - -
15. si:dkeyp-85d8.5 ENSDARG00000103346 3 1 - - 1.000 - - - - - - si:dkeyp-85d8.5 [Source:ZFIN;Acc:ZDB-GENE-110913-144]
16. CRYGM4 ENSDARG00000008219 1 1 - - - 1.000 - - - - - crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
17. CABZ01088508.1 CABZ01088508.1 0 1 - - 1.000 - - - - - -
18. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - - - - 1.000
19. CU138503.2 CU138503.2 0 1 - - 1.000 - - - - - -
20. yme1l1b ENSDARG00000104401 0 1 - - - - - - - - 1.000 YME1-like 1b [Source:ZFIN;Acc:ZDB-GENE-070410-25]
21. si:dkeyp-68a7.5 si:dkeyp-68a7.5 6 1 - - 1.000 - - - - - -
22. si:dkey-191j3.2 ENSDARG00000101997 1 1 - - 1.000 - - - - - - si:dkey-191j3.2 [Source:ZFIN;Acc:ZDB-GENE-081103-55]
23. CR536621.1 CR536621.1 2 1 - - 1.000 - - - - - -
24. zgc:174698_1 ENSDARG00000075731, ENSDARG00000077266, ENSDARG00000098236 1 1 - - - - - - - - 1.000 zgc:174698 [Source:ZFIN;Acc:ZDB-GENE-080204-74]
25. CR381673.1 ENSDARG00000098337 7 1 - - - - - - - - 1.000
26. si:dkey-164k14.1 si:dkey-164k14.1 5 1 - - 1.000 - - - - - -
27. si:ch211-208f21.4 si:ch211-208f21.4 4 1 - - - - - - - - 1.000
28. rfc4 ENSDARG00000042458 2 1 - - - 1.000 - - - - - replication factor C (activator 1) 4 [Source:ZFIN;Acc:ZDB-GENE-040824-3]
29. GBE1 GBE1 12 1 - - - - - - - - 1.000
30. si:ch211-278f21.5 si:ch211-278f21.5 1 1 - - - 1.000 - - - - -
31. si:dkey-165g20.2 si:dkey-165g20.2 3 1 - - 1.000 - - - - - -
32. si:ch211-224l10.5 si:ch211-224l10.5 1 1 - - - 1.000 - - - - -
33. CU467646.3 ENSDARG00000099076 36 1 - - - - - - - - 1.000 mucin-2-like [Source:NCBI gene;Acc:108179180]
34. si:ch211-210m1.3 si:ch211-210m1.3 2 1 - - - 1.000 - - - - -
35. BEGAIN_1 BEGAIN_1 7 1 - - 1.000 - - - - - -
36. pip4k2ab ENSDARG00000063544 1 1 - - - - - - - - 1.000 phosphatidylinositol-5-phosphate 4-kinase, type II, alpha b [Source:ZFIN;Acc:ZDB-GENE-070912-272]
37. si:dkey-4p15.5 ENSDARG00000086272 7 1 - - 1.000 - - - - - - si:dkey-4p15.5 [Source:ZFIN;Acc:ZDB-GENE-121214-193]
38. BX323023.1 BX323023.1 1 1 - - - - - - - - 1.000
39. cabp7b ENSDARG00000060846 5 1 - - 1.000 - - - - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
40. ttc6 ENSDARG00000104125 7 1 - - 1.000 - - - - - - tetratricopeptide repeat domain 6 [Source:ZFIN;Acc:ZDB-GENE-090429-2]
41. CABZ01055343.2_1 CABZ01055343.2_1 6 1 - - - - - - - - 1.000
42. si:ch211-215m21.27 si:ch211-215m21.27 3 1 - - 1.000 - - - - - -
43. si:dkey-188i13.8 ENSDARG00000092725 1 1 - - 1.000 - - - - - - si:dkey-188i13.8 [Source:ZFIN;Acc:ZDB-GENE-090312-93]
44. GRINA GRINA 12 1 - - - - - - - - 1.000
45. RIMS2 RIMS2 2 1 - - - - - - - - 1.000
46. pcdh2g5 1 1 - - 1.000 - - - - - - protocadherin 2 gamma 5
47. gucy2f ENSDARG00000025504 6 1 - - - 1.000 - - - - - guanylate cyclase 2F, retinal [Source:ZFIN;Acc:ZDB-GENE-011128-7]
48. CR318624.1 ENSDARG00000094618 5 1 - - - 1.000 - - - - -
49. FHDC1 ENSDARG00000074812 2 1 - - 1.000 - - - - - - FH2 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040826-4]
50. si:dkey-148a12.2 si:dkey-148a12.2 1 1 - - 1.000 - - - - - -
51. si:ch211-196h16.4 ENSDARG00000094782 0 1 - - 1.000 - - - - - - si:ch211-196h16.4 [Source:ZFIN;Acc:ZDB-GENE-081029-1]
52. si:dkeyp-11g8.3 si:dkeyp-11g8.3 20 1 - - 1.000 - - - - - -
53. CABZ01035647.1 CABZ01035647.1 5 1 - - - - - - - - 1.000
54. si:ch73-36i7.2 si:ch73-36i7.2 5 1 - - 1.000 - - - - - -
55. ved ENSDARG00000102389 0 1 - - - - - - - - 1.000 ventrally expressed dharma/bozozok antagonist [Source:ZFIN;Acc:ZDB-GENE-030813-1]
56. si:ch211-274f20.4 si:ch211-274f20.4 0 1 - - 1.000 - - - - - -
57. nkd3_1 ENSDARG00000013174, ENSDARG00000069984, ENSDARG00000086218, ENSDARG00000096278 1 1 - - 1.000 - - - - - - naked cuticle homolog 3 [Source:ZFIN;Acc:ZDB-GENE-060503-63]
58. HTRA2_8 HTRA2_8 0 1 - - 1.000 - - - - - -
59. si:rp71-7l19.7 si:rp71-7l19.7 1 1 - - 1.000 - - - - - -
60. TNPO1 ENSDARG00000035390 1 1 - - - - - - - - 1.000 transportin 1 [Source:ZFIN;Acc:ZDB-GENE-080819-1]
61. si:dkey-177p2.15p si:dkey-177p2.15p 20 1 - - 1.000 - - - - - -
62. slc5a5 ENSDARG00000005392 6 1 - - - 1.000 - - - - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
63. mir124-1 10 1 - - 1.000 - - - - - - microRNA 124-1
64. prf1.6 ENSDARG00000024522, ENSDARG00000114201 0 1 - - - - - - - - 1.000 perforin 1.6 [Source:ZFIN;Acc:ZDB-GENE-070410-126]
65. tacr3a ENSDARG00000075112 1 1 - - - 1.000 - - - - - tachykinin receptor 3a [Source:ZFIN;Acc:ZDB-GENE-090312-106]
66. asf1ba_1 ENSDARG00000101037 3 1 - - - - - - - - 1.000 anti-silencing function 1Ba histone chaperone [Source:ZFIN;Acc:ZDB-GENE-031118-197]
67. CABZ01072856.1 CABZ01072856.1 0 1 - - 1.000 - - - - - -
68. si:dkey-26i24.1 ENSDARG00000102673 4 1 - - 1.000 - - - - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
69. ralgps1 ENSDARG00000068370 39 1 - - 1.000 - - - - - - Ral GEF with PH domain and SH3 binding motif 1 [Source:ZFIN;Acc:ZDB-GENE-070720-16]
70. nog3 ENSDARG00000053528, ENSDARG00000116141, ENSDARG00000116361 1 1 - - 1.000 - - - - - - noggin 3 [Source:ZFIN;Acc:ZDB-GENE-990714-8]
71. ZNF337_19 ZNF337_19 3 1 - - - - - - - - 1.000
72. STOX2 STOX2 0 1 - - 1.000 - - - - - -
73. SOBP SOBP 0 1 - - - - - - - - 1.000
74. BX927253.1 ENSDARG00000096072 1 1 - - 1.000 - - - - - -
75. si:dkey-199m13.3 si:dkey-199m13.3 2 1 - - - - - - - - 1.000
76. si:rp71-1h20.2 si:rp71-1h20.2 0 1 - - 1.000 - - - - - -
77. si:dkey-16j24.1 2 1 - - 1.000 - - - - - - si:dkey-16j24.1, transcript variant X1
78. CT025887.1 ENSDARG00000114574 1 1 - - - - - - - - 1.000 uncharacterized LOC110440185 [Source:NCBI gene;Acc:110440185]
79. CUZD1 CUZD1 2 1 - - - 1.000 - - - - -
80. si:dkey-4m13.3 6 1 - - - 1.000 - - - - - si:dkey-4m13.3
81. abhd10a ENSDARG00000076435 3 1 - - 1.000 - - - - - - abhydrolase domain containing 10a [Source:ZFIN;Acc:ZDB-GENE-060526-144]
82. FP340264.1 FP340264.1 0 1 - - 1.000 - - - - - -
83. CU184872.1 CU184872.1 15 1 - - 1.000 - - - - - -
84. fsd1l ENSDARG00000059432, ENSDARG00000113444, ENSDARG00000114848 3 1 - - 1.000 - - - - - - fibronectin type III and SPRY domain containing 1-like [Source:ZFIN;Acc:ZDB-GENE-070501-9]
85. scg5_1 ENSDARG00000032126, ENSDARG00000077045 6 1 - - - - - - - - 1.000 secretogranin V [Source:ZFIN;Acc:ZDB-GENE-040426-1687]
86. sez6a ENSDARG00000100876 35 1 - - 1.000 - - - - - - seizure related 6 homolog a [Source:ZFIN;Acc:ZDB-GENE-030131-8208]
87. CR931764.1 CR931764.1 8 1 - - 1.000 - - - - - -
88. dmc1 ENSDARG00000055883, ENSDARG00000110457 5 1 - - - - - - - - 1.000 DNA meiotic recombinase 1 [Source:ZFIN;Acc:ZDB-GENE-060331-93]
89. si:dkey-254e13.13 si:dkey-254e13.13 6 1 - - - 1.000 - - - - -
90. CR626884.3 ENSDARG00000104648 1 1 - - 1.000 - - - - - -
91. BX901974.1 ENSDARG00000067592 2 1 - - - 1.000 - - - - -
92. CABZ01073389.1 CABZ01073389.1 0 1 - - 1.000 - - - - - -
93. SNORA35 SNORA35 0 1 - - - - - - - - 1.000
94. si:ch211-201b11.3 si:ch211-201b11.3 2 1 - - 1.000 - - - - - -
95. zgc:174311 zgc:174311 3 1 - - 1.000 - - - - - -
96. pcdh2g12 5 1 - - 1.000 - - - - - - protocadherin 2 gamma 12
97. CCDC171 ENSDARG00000027381 3 1 - - 1.000 - - - - - - coiled-coil domain containing 171 [Source:ZFIN;Acc:ZDB-GENE-110411-270]
98. iffo2a ENSDARG00000062101, ENSDARG00000111078 0 1 - - 1.000 - - - - - - intermediate filament family orphan 2a [Source:ZFIN;Acc:ZDB-GENE-090313-342]
99. sowahca ENSDARG00000098790 1 1 - - - - - - - - 1.000 sosondowah ankyrin repeat domain family Ca [Source:ZFIN;Acc:ZDB-GENE-081104-106]
100. wibg wibg 2 1 - - - - - - - - 1.000

There are 398 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA