Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-274k16.6

Gene Name Gene ID Reads Annotation
si:ch211-274k16.6 si:ch211-274k16.6 26










Genes with expression patterns similar to si:ch211-274k16.6

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-274k16.6 si:ch211-274k16.6 26 5 - - 1.000 1.000 - 1.000 - 1.000 1.000
2. PPAPDC3 PPAPDC3 14 2.812 - - - - - 1.000 - 0.812 1.000
3. aqp10b ENSDARG00000058678 1 2 - - - 1.000 - - - - 1.000 aquaporin 10b [Source:ZFIN;Acc:ZDB-GENE-060503-57]
4. GABRA3 ENSDARG00000090883 5 2 - - - - - 1.000 - - 1.000 gamma-aminobutyric acid (GABA) A receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-091204-365]
5. si:dkeyp-104b3.21 ENSDARG00000103964 6 2 - - - - - 1.000 - - 1.000 si:dkeyp-104b3.21 [Source:ZFIN;Acc:ZDB-GENE-070912-626]
6. AL929134.2 AL929134.2 5 1.845 - - - 0.845 - - - - 1.000
7. si:ch73-346o4.3 si:ch73-346o4.3 29 1.764 - - - - - 1.000 - 0.764 -
8. ela2l ENSDARG00000056765, ENSDARG00000114256 31 1.763 - - - - - 1.000 - 0.763 - elastase 2 like [Source:ZFIN;Acc:ZDB-GENE-040511-1]
9. si:dkey-109j17.5 ENSDARG00000104891 2 1.744 - - - - - 1.000 - - 0.744 si:dkey-109j17.5 [Source:ZFIN;Acc:ZDB-GENE-090313-173]
10. cep89 ENSDARG00000005092 4 1.744 - - - - - 1.000 - - 0.744 centrosomal protein 89 [Source:ZFIN;Acc:ZDB-GENE-040426-1210]
11. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 1.638 - - - 0.831 - - - 0.807 - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
12. LRRC16B 84 1.46 - - 0.705 - - - - 0.755 - leucine rich repeat containing 16B, transcript variant X2
13. CU694372.1 ENSDARG00000097988 105 1 - - - - - 1.000 - - -
14. ddhd1b ENSDARG00000037042, ENSDARG00000111543, ENSDARG00000113512 12 1 - - - - - 1.000 - - - DDHD domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-040724-18]
15. si:ch211-240b21.2 ENSDARG00000068279 2 1 - - - - - - - - 1.000 si:ch211-240b21.2 [Source:ZFIN;Acc:ZDB-GENE-060526-125]
16. si:dkeyp-34c12.1 ENSDARG00000071083, ENSDARG00000113229 6 1 - - - - - - - - 1.000 si:dkeyp-34c12.1 [Source:ZFIN;Acc:ZDB-GENE-030131-5347]
17. SGCZ ENSDARG00000106258 2 1 - - - 1.000 - - - - - sarcoglycan zeta [Source:HGNC Symbol;Acc:HGNC:14075]
18. snf8 ENSDARG00000058076 384 1 - - - - - 1.000 - - - SNF8, ESCRT-II complex subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-117]
19. vwc2 ENSDARG00000076495 22 1 - - - - - 1.000 - - - von Willebrand factor C domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-090313-315]
20. SH3GL2 SH3GL2 0 1 - - - - - - - - 1.000
21. si:dkey-28d5.7 si:dkey-28d5.7 2 1 - - - - - 1.000 - - -
22. CABZ01015475.1 ENSDARG00000104841 6 1 - - - - - 1.000 - - - jumonji domain containing 8 [Source:NCBI gene;Acc:100330060]
23. BX000981.1 ENSDARG00000092940 1 1 - - - - - 1.000 - - -
24. CAMKK1 CAMKK1 2 1 - - - - - - - - 1.000
25. th2 ENSDARG00000038384 1 1 - - - - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
26. si:ch211-3o3.8 si:ch211-3o3.8 2 1 - - - - - 1.000 - - -
27. si:ch211-264e16.2 ENSDARG00000094415 4 1 - - - 1.000 - - - - - si:ch211-264e16.2 [Source:ZFIN;Acc:ZDB-GENE-060503-320]
28. CABZ01069081.1 CABZ01069081.1 16 1 - - - - - 1.000 - - -
29. leprel4 leprel4 34 1 - - - - - 1.000 - - -
30. wdr65 wdr65 251 1 - - - - - 1.000 - - -
31. efr3a ENSDARG00000005163, ENSDARG00000115083 7 1 - - - - - 1.000 - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
32. CR855338.2 CR855338.2 0 1 - - - - - 1.000 - - -
33. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - 1.000 - - -
34. si:dkey-111b14.2 si:dkey-111b14.2 25 1 - - - - - 1.000 - - -
35. si:ch211-194e1.8 si:ch211-194e1.8 14 1 - - - 1.000 - - - - -
36. DIP2B DIP2B 18 1 - - - - - 1.000 - - -
37. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - 1.000 - - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
38. CU468142.1 CU468142.1 6 1 - - - - - 1.000 - - -
39. gng2 ENSDARG00000056831 81 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050417-59]
40. si:dkeyp-51f12.3 ENSDARG00000091904 1 1 - - - - - - - - 1.000 si:dkeyp-51f12.3 [Source:ZFIN;Acc:ZDB-GENE-070705-547]
41. ZP2_2 ZP2_2 28 1 - - - - - 1.000 - - -
42. si:ch211-76l23.5 si:ch211-76l23.5 26 1 - - - - - 1.000 - - -
43. BX601644.1 ENSDARG00000090632 2 1 - - - 1.000 - - - - - cytokine receptor-like factor 2 [Source:NCBI gene;Acc:100294510]
44. mettl8 ENSDARG00000017359 36 1 - - - - - 1.000 - - - methyltransferase like 8 [Source:ZFIN;Acc:ZDB-GENE-041114-19]
45. zgc:114081 ENSDARG00000057899, ENSDARG00000113048 5 1 - - - - - 1.000 - - - zgc:114081 [Source:ZFIN;Acc:ZDB-GENE-050913-78]
46. nid2b ENSDARG00000009471 4 1 - - - - - 1.000 - - - nidogen 2b (osteonidogen) [Source:ZFIN;Acc:ZDB-GENE-040724-143]
47. pole2 ENSDARG00000100028 42 1 - - - - - 1.000 - - - polymerase (DNA directed), epsilon 2 [Source:ZFIN;Acc:ZDB-GENE-020419-16]
48. CABZ01046996.1 ENSDARG00000111833 1 1 - - - - - - - - 1.000
49. MPST MPST 6 1 - - - 1.000 - - - - -
50. CABZ01051641.1 CABZ01051641.1 0 1 - - - - - 1.000 - - -
51. BEGAIN_1 BEGAIN_1 7 1 - - - - - 1.000 - - -
52. si:dkey-15f23.2 si:dkey-15f23.2 2 1 - - - - - 1.000 - - -
53. si:dkey-11o15.7 ENSDARG00000058023, ENSDARG00000089758 0 1 - - - - - 1.000 - - - si:dkey-11o15.7 [Source:ZFIN;Acc:ZDB-GENE-091204-328]
54. nphp1 ENSDARG00000009046, ENSDARG00000113790 104 1 - - - - - 1.000 - - - nephronophthisis 1 [Source:ZFIN;Acc:ZDB-GENE-060929-1234]
55. si:dkey-250k10.3 si:dkey-250k10.3 2 1 - - - 1.000 - - - - -
56. CR524823.2 CR524823.2 0 1 - - - - - - - - 1.000
57. si:ch211-208k15.1 ENSDARG00000088650 11 1 - - - - - 1.000 - - - si:ch211-208k15.1 [Source:ZFIN;Acc:ZDB-GENE-100922-189]
58. LRRC71 LRRC71 11 1 - - - - - 1.000 - - -
59. si:ch211-260g14.9 si:ch211-260g14.9 2 1 - - - - - 1.000 - - -
60. FP236810.3 FP236810.3 1 1 - - - - - 1.000 - - -
61. MUC5AC_2 MUC5AC_2 5 1 - - - - - 1.000 - - -
62. FP102169.1 ENSDARG00000110967 1 1 - - - - - - - - 1.000 secreted frizzled-related protein 5-like [Source:NCBI gene;Acc:101884738]
63. AL844567.1_1 AL844567.1_1 34 1 - - - - - 1.000 - - -
64. si:dkey-30k22.8 si:dkey-30k22.8 7 1 - - - 1.000 - - - - -
65. slc47a2 2 1 - - - 1.000 - - - - - solute carrier family 47 (multidrug and toxin extrusion), member 2
66. CABZ01112732.1 ENSDARG00000068453 4 1 - - - - - 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
67. bbs5 ENSDARG00000039827 211 1 - - - - - 1.000 - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
68. serpine3 ENSDARG00000057108 49 1 - - - - - 1.000 - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 3 [Source:ZFIN;Acc:ZDB-GENE-050309-223]
69. aptx ENSDARG00000027143 87 1 - - - - - 1.000 - - - aprataxin [Source:ZFIN;Acc:ZDB-GENE-040628-2]
70. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1 - - - - - 1.000 - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
71. HIST1H4J_3 HIST1H4J_3 0 1 - - - - - - - - 1.000
72. FAM13C FAM13C 1 1 - - - - - 1.000 - - -
73. ctrb1 ENSDARG00000090428, ENSDARG00000110297 1 1 - - - - - 1.000 - - - chymotrypsinogen B1 [Source:ZFIN;Acc:ZDB-GENE-030131-1171]
74. C24H8orf34 C24H8orf34 1 1 - - - - - 1.000 - - -
75. CR792453.3 ENSDARG00000110328 5 1 - - - - - 1.000 - - - uncharacterized LOC110438862 [Source:NCBI gene;Acc:110438862]
76. U1_28 U1_28 1 1 - - - 1.000 - - - - -
77. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - 1.000 - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
78. C3H19orf66 C3H19orf66 20 1 - - - - - 1.000 - - -
79. zgc:112146 ENSDARG00000104829 34 1 - - - - - 1.000 - - - zgc:112146 [Source:ZFIN;Acc:ZDB-GENE-050417-237]
80. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - - - 1.000 - - - - -
81. si:dkey-34f9.3 ENSDARG00000077813 3 1 - - - - - - - - 1.000 si:dkey-34f9.3 [Source:ZFIN;Acc:ZDB-GENE-081104-410]
82. cnnm1 1 1 - - - - - - - - 1.000 cyclin and CBS domain divalent metal cation transport mediator 1, transcript variant X3
83. RNF14_3 RNF14_3 15 1 - - - - - 1.000 - - -
84. DMXL2 ENSDARG00000091293 3 1 - - - - - 1.000 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
85. asphd1 ENSDARG00000075813, ENSDARG00000110592 54 1 - - - - - 1.000 - - - aspartate beta-hydroxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-091204-62]
86. ppapdc1a ppapdc1a 1 1 - - - - - - - - 1.000
87. irgq2 ENSDARG00000068657 4 1 - - - - - - - - 1.000 immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
88. XPO5 ENSDARG00000098868 3 1 - - - - - - - - 1.000 exportin 5 [Source:HGNC Symbol;Acc:HGNC:17675]
89. ADAMTS15 ADAMTS15 73 1 - - - - - 1.000 - - -
90. zp2.5 ENSDARG00000086522 15 1 - - - - - 1.000 - - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
91. abcd1 ENSDARG00000074876 6 1 - - - - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-27]
92. cul4a ENSDARG00000096578 14 1 - - - - - 1.000 - - - cullin 4A [Source:ZFIN;Acc:ZDB-GENE-040426-1357]
93. CU929159.1 CU929159.1 0 1 - - - - - 1.000 - - -
94. si:dkey-6a5.10 si:dkey-6a5.10 17 1 - - - - - 1.000 - - -
95. CIT_1 CIT_1 6 1 - - - - - 1.000 - - -
96. or133-5 ENSDARG00000105757 1 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 133, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-38]
97. HEATR5B ENSDARG00000059116 3 1 - - - 1.000 - - - - - HEAT repeat containing 5B [Source:ZFIN;Acc:ZDB-GENE-130530-676]
98. si:dkey-246e1.3 ENSDARG00000094533 1 1 - - - - - - - - 1.000 si:dkey-246e1.3 [Source:ZFIN;Acc:ZDB-GENE-070705-416]
99. HEPACAM ENSDARG00000112032 1 1 - - - - - 1.000 - - - hepatic and glial cell adhesion molecule [Source:HGNC Symbol;Acc:HGNC:26361]
100. gfpt1 ENSDARG00000057465 14 1 - - - - - 1.000 - - - glutamine--fructose-6-phosphate transaminase 1 [Source:ZFIN;Acc:ZDB-GENE-070423-1]

There are 636 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA