Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-270n8.4

Gene Name Gene ID Reads Annotation
si:ch211-270n8.4 87 si:ch211-270n8.4










Genes with expression patterns similar to si:ch211-270n8.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-270n8.4 87 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-270n8.4
2. chd 56 2.421 - 0.814 - - - 0.745 0.862 - - chordin
3. pdzk1 ENSDARG00000022261 398 2.303 0.780 - - - - 0.739 0.784 - - PDZ domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-031222-1]
4. si:ch211-207j7.2 ENSDARG00000090793 316 2.29 0.731 - - - - 0.769 0.790 - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
5. hsd20b2 ENSDARG00000031336, ENSDARG00000111087 246 2.241 - 0.732 - - - 0.766 0.743 - - hydroxysteroid (20-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-21]
6. fam213b ENSDARG00000029795 387 2.238 - 0.736 - - 0.712 - 0.790 - - family with sequence similarity 213, member B [Source:ZFIN;Acc:ZDB-GENE-040426-2556]
7. lad1 ENSDARG00000022698 127 1.86 0.926 0.934 - - - - - - - ladinin [Source:ZFIN;Acc:ZDB-GENE-030616-268]
8. pex11g ENSDARG00000025559 129 1.777 - 0.951 - - 0.826 - - - - peroxisomal biogenesis factor 11 gamma [Source:ZFIN;Acc:ZDB-GENE-050913-79]
9. als2a ENSDARG00000075111 29 1.771 - 0.918 - - - - 0.853 - - amyotrophic lateral sclerosis 2a (juvenile) [Source:ZFIN;Acc:ZDB-GENE-070402-2]
10. skap1 ENSDARG00000001498, ENSDARG00000114047 55 1.76 - 0.860 - - 0.900 - - - - src kinase associated phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090721-1]
11. fes ENSDARG00000011449 46 1.752 - 0.860 - - 0.892 - - - - FES proto-oncogene, tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-100812-10]
12. SPAG17 SPAG17 31 1.747 0.850 0.897 - - - - - - -
13. crlf1a ENSDARG00000024365 222 1.734 - - - - - 0.886 0.848 - - cytokine receptor-like factor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-397]
14. AL954698.1 ENSDARG00000098202 377 1.726 - 0.918 - - - - 0.808 - -
15. PTDSS1 PTDSS1 186 1.725 - 0.878 - - 0.847 - - - -
16. sema6d ENSDARG00000002748 133 1.703 0.742 0.961 - - - - - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D [Source:ZFIN;Acc:ZDB-GENE-040426-1933]
17. kctd12b ENSDARG00000037507, ENSDARG00000111869 21 1.692 - - - - 0.924 - 0.768 - - potassium channel tetramerisation domain containing 12b [Source:ZFIN;Acc:ZDB-GENE-050417-104]
18. klf6b ENSDARG00000038561 27 1.685 - 0.900 - - - - 0.785 - - Kruppel-like factor 6b [Source:ZFIN;Acc:ZDB-GENE-070912-633]
19. gpr37b ENSDARG00000033296 283 1.683 - 0.921 - - 0.762 - - - - G protein-coupled receptor 37b [Source:ZFIN;Acc:ZDB-GENE-041210-264]
20. stk33 ENSDARG00000054318, ENSDARG00000114909 34 1.678 0.742 0.936 - - - - - - - serine/threonine kinase 33 [Source:ZFIN;Acc:ZDB-GENE-040724-242]
21. GLDC ENSDARG00000035120 112 1.676 - 0.859 - - - - 0.817 - - glycine dehydrogenase (decarboxylating) [Source:ZFIN;Acc:ZDB-GENE-030131-340]
22. SLC24A2 ENSDARG00000042988 242 1.673 - 0.880 - - - 0.793 - - - solute carrier family 24 (sodium/potassium/calcium exchanger), member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-277]
23. AL954146.5 AL954146.5 202 1.67 0.769 - - - - 0.901 - - -
24. tekt2 ENSDARG00000028973 160 1.665 0.782 - - - - - 0.883 - - tektin 2 (testicular) [Source:ZFIN;Acc:ZDB-GENE-040113-1]
25. pkmyt1 ENSDARG00000074730 213 1.664 0.963 - - - - 0.701 - - - protein kinase, membrane associated tyrosine/threonine 1 [Source:ZFIN;Acc:ZDB-GENE-060810-80]
26. glis3 ENSDARG00000069726 59 1.663 - - - - - 0.783 0.880 - - GLIS family zinc finger 3 [Source:ZFIN;Acc:ZDB-GENE-070112-2232]
27. HSPB11 ENSDARG00000002204 170 1.657 0.906 - - - - - 0.751 - - heat shock protein, alpha-crystallin-related, b11 [Source:ZFIN;Acc:ZDB-GENE-030131-5148]
28. klhl26 ENSDARG00000053876 48 1.656 0.738 0.918 - - - - - - - kelch-like family member 26 [Source:ZFIN;Acc:ZDB-GENE-030131-5975]
29. hoxd13a ENSDARG00000059256 1190 1.651 0.926 0.725 - - - - - - - homeobox D13a [Source:ZFIN;Acc:ZDB-GENE-990415-119]
30. stx11a ENSDARG00000044039 39 1.65 - 0.918 - - - 0.732 - - - syntaxin 11a [Source:ZFIN;Acc:ZDB-GENE-040426-2564]
31. fermt3a fermt3a 56 1.646 - - - - 0.881 - 0.765 - -
32. si:ch211-270n8.3 87 1.644 - - - - - 0.806 0.838 - - si:ch211-270n8.3, transcript variant X2
33. si:ch211-57i17.2 ENSDARG00000093354 58 1.642 0.776 0.866 - - - - - - - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
34. odf3b ENSDARG00000114397, ENSDARG00000116899 21 1.642 0.799 - - - - - 0.843 - - outer dense fiber of sperm tails 3B [Source:ZFIN;Acc:ZDB-GENE-030131-7464]
35. TBC1D17 ENSDARG00000005927 163 1.64 - 0.937 - - - 0.703 - - - TBC1 domain family, member 17 [Source:ZFIN;Acc:ZDB-GENE-050522-79]
36. npm1a ENSDARG00000014329, ENSDARG00000113199 31910 1.628 - - - - - 0.777 0.851 - - nucleophosmin 1a [Source:ZFIN;Acc:ZDB-GENE-021028-1]
37. ugt2b6 ugt2b6 111 1.627 - 0.829 - - - - 0.798 - -
38. ITGAE ITGAE 53 1.627 0.926 - - - - - 0.701 - -
39. FP236810.2 ENSDARG00000113218 140 1.62 0.875 0.745 - - - - - - - UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
40. hhipl1 ENSDARG00000062501 210 1.62 - 0.815 - - - - 0.805 - - HHIP-like 1 [Source:ZFIN;Acc:ZDB-GENE-090306-3]
41. SLC46A2 ENSDARG00000075229 78 1.618 0.830 - - - - - 0.788 - - solute carrier family 46 member 2 [Source:ZFIN;Acc:ZDB-GENE-170126-3]
42. il13ra2 ENSDARG00000039436, ENSDARG00000111925 286 1.617 - - - - - 0.822 0.795 - - interleukin 13 receptor, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-030521-10]
43. cldn15la ENSDARG00000016081 197 1.615 - - - - - 0.707 0.908 - - claudin 15-like a [Source:ZFIN;Acc:ZDB-GENE-010328-12]
44. eps8l3 eps8l3 144 1.606 - 0.716 - - - - 0.890 - -
45. kcnj1a.1 ENSDARG00000091232 110 1.604 0.804 - - - - 0.800 - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-031118-55]
46. ttll6 ENSDARG00000054023, ENSDARG00000109623 147 1.603 0.888 - - - - - 0.715 - - tubulin tyrosine ligase-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-080107-1]
47. mb ENSDARG00000031952 351 1.602 0.751 - - - - 0.851 - - - myoglobin [Source:ZFIN;Acc:ZDB-GENE-040426-1430]
48. zgc:101040 ENSDARG00000005176 369 1.601 - - - - 0.727 - 0.874 - - zgc:101040 [Source:ZFIN;Acc:ZDB-GENE-040801-107]
49. ANGPT4 ENSDARG00000076787 140 1.599 - 0.818 - - - 0.781 - - - angiopoietin 4 [Source:ZFIN;Acc:ZDB-GENE-110104-1]
50. BX890577.1 BX890577.1 257 1.594 - 0.777 - - - - 0.817 - -
51. kcnj13 ENSDARG00000043443 700 1.594 0.713 - - - - - 0.881 - - potassium inwardly-rectifying channel, subfamily J, member 13 [Source:ZFIN;Acc:ZDB-GENE-070129-1]
52. C8H9orf116 C8H9orf116 379 1.593 - - - - - 0.841 0.752 - -
53. si:dkey-33c12.3 ENSDARG00000057881, ENSDARG00000110707 394 1.581 - - - - 0.787 - 0.794 - - si:dkey-33c12.3 [Source:ZFIN;Acc:ZDB-GENE-030131-7320]
54. esrrb ENSDARG00000100847 636 1.579 - - - - - 0.842 0.737 - - estrogen-related receptor beta [Source:ZFIN;Acc:ZDB-GENE-040616-2]
55. efhc2 ENSDARG00000004204 59 1.578 0.860 - - - - - 0.718 - - EF-hand domain (C-terminal) containing 2 [Source:ZFIN;Acc:ZDB-GENE-031001-10]
56. clic5b_1 ENSDARG00000070584 149 1.577 - - - - - 0.768 0.809 - - chloride intracellular channel 5b [Source:ZFIN;Acc:ZDB-GENE-040426-2542]
57. CLDN10 CLDN10 38 1.568 - - 0.711 - - - 0.857 - -
58. wdr65 wdr65 251 1.561 0.834 0.727 - - - - - - -
59. smad9 368 1.56 - 0.759 - - - - 0.801 - - SMAD family member 9, transcript variant X1
60. hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 1.556 - - - - - 0.751 0.805 - - HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]
61. bard1 ENSDARG00000076733 40 1.556 - - - - - 0.748 0.808 - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
62. si:dkey-148f10.4 ENSDARG00000094627, ENSDARG00000109786 236 1.551 0.704 - - - - - 0.847 - - si:dkey-148f10.4 [Source:ZFIN;Acc:ZDB-GENE-060503-292]
63. ZNF784_1 ZNF784_1 155 1.547 0.718 0.829 - - - - - - -
64. dazl ENSDARG00000036214 11 1.545 - - - - - 0.782 0.763 - - deleted in azoospermia-like [Source:ZFIN;Acc:ZDB-GENE-000405-6]
65. jam2b ENSDARG00000079071 1031 1.545 - 0.828 - - - - 0.717 - - junctional adhesion molecule 2b [Source:ZFIN;Acc:ZDB-GENE-080229-3]
66. ilvbl ENSDARG00000017126 356 1.542 0.803 - - - 0.739 - - - - ilvB (bacterial acetolactate synthase)-like [Source:ZFIN;Acc:ZDB-GENE-040426-1623]
67. BX571714.1 ENSDARG00000114727 243 1.536 0.717 - - - - 0.819 - - - SET domain containing 1A [Source:NCBI gene;Acc:556535]
68. clcnk ENSDARG00000022560 355 1.534 - - - - - 0.782 0.752 - - chloride channel K [Source:ZFIN;Acc:ZDB-GENE-040426-1379]
69. zbtb1 ENSDARG00000023040, ENSDARG00000112571 211 1.526 0.802 - - - - 0.724 - - - zinc finger and BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041001-126]
70. ccdc151 ENSDARG00000062978, ENSDARG00000113033 316 1.522 - - - - - 0.808 0.714 - - coiled-coil domain containing 151 [Source:ZFIN;Acc:ZDB-GENE-061013-787]
71. gal3st1 gal3st1 108 1.522 0.764 - - - - 0.758 - - -
72. ankmy1 ENSDARG00000062702 52 1.522 0.703 - - - - 0.819 - - - ankyrin repeat and MYND domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-740]
73. CERS4 CERS4 319 1.521 - 0.786 - - 0.735 - - - -
74. zgc:113209 ENSDARG00000100294 176 1.519 - 0.801 - - 0.718 - - - - zgc:113209 [Source:ZFIN;Acc:ZDB-GENE-050410-8]
75. ugt5c3 ENSDARG00000061439 142 1.513 0.789 - - - - 0.724 - - - UDP glucuronosyltransferase 5 family, polypeptide C3 [Source:ZFIN;Acc:ZDB-GENE-050419-23]
76. ttc12 ENSDARG00000056896 97 1.51 - 0.800 - - - 0.710 - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
77. atp1b1a ENSDARG00000013144 19744 1.505 - - - - - 0.711 0.794 - - ATPase Na+/K+ transporting subunit beta 1a [Source:ZFIN;Acc:ZDB-GENE-001127-3]
78. elac2 ENSDARG00000034060 252 1.504 0.755 - - - - - 0.749 - - elaC ribonuclease Z 2 [Source:ZFIN;Acc:ZDB-GENE-041111-227]
79. gucy2c ENSDARG00000014320, ENSDARG00000116238 322 1.502 - - - - - 0.779 0.723 - - guanylate cyclase 2C [Source:ZFIN;Acc:ZDB-GENE-091118-67]
80. RNF115 ENSDARG00000062450 83 1.499 - 0.771 - - - - 0.728 - - ring finger protein 115 [Source:ZFIN;Acc:ZDB-GENE-061215-82]
81. ryroxd1 227 1.498 - 0.741 - - 0.757 - - - - pyridine nucleotide-disulphide oxidoreductase domain 1, transcript variant X1
82. stab1 ENSDARG00000076484 717 1.494 - - - - - 0.743 0.751 - - stabilin 1 [Source:ZFIN;Acc:ZDB-GENE-050208-554]
83. bcl9l ENSDARG00000055054 128 1.492 0.742 - - - - - 0.750 - - B cell CLL/lymphoma 9-like [Source:ZFIN;Acc:ZDB-GENE-040927-29]
84. ERICH2 ENSDARG00000107534 160 1.486 0.773 - - - - 0.713 - - - glutamate-rich 2 [Source:ZFIN;Acc:ZDB-GENE-131231-2]
85. EPS8 78 1.483 - 0.758 - - - - 0.725 - - epidermal growth factor receptor pathway substrate 8, transcript variant X14
86. spata18 ENSDARG00000052343 216 1.471 - - - - - 0.710 0.761 - - spermatogenesis associated 18 [Source:ZFIN;Acc:ZDB-GENE-050522-306]
87. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1.47 0.742 - - - - - 0.728 - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
88. CDC42EP1 CDC42EP1 50 1.468 - - 0.709 - - - 0.759 - -
89. hnf4g ENSDARG00000071565 117 1.462 0.737 - - - - - 0.725 - - hepatocyte nuclear factor 4, gamma [Source:ZFIN;Acc:ZDB-GENE-060929-100]
90. cobl_1 ENSDARG00000091006 293 1.457 0.757 - - - - - 0.700 - - cordon-bleu WH2 repeat protein [Source:ZFIN;Acc:ZDB-GENE-091020-11]
91. atp8b5b 55 1.455 0.715 - - - - - 0.740 - - ATPase, class I, type 8B, member 5b
92. CU915778.2 CU915778.2 194 1.455 0.742 - - - - - 0.713 - -
93. pax2a ENSDARG00000028148 1408 1.447 - - - - 0.716 - 0.731 - - paired box 2a [Source:ZFIN;Acc:ZDB-GENE-990415-8]
94. BX511227.1 ENSDARG00000102499 111 1.446 - - - - 0.745 - 0.701 - -
95. DBNDD2 DBNDD2 216 1.442 - - 0.700 - 0.742 - - - -
96. gpr126 gpr126 51 1.434 - - - - - 0.710 0.724 - -
97. FOXN2 FOXN2 118 1 1.000 - - - - - - - -
98. AKR1C1 AKR1C1 32 0.96 - - - - - - 0.960 - -
99. zgc:92218 zgc:92218 64 0.959 - 0.959 - - - - - - -
100. hook1 ENSDARG00000042946 452 0.958 - - - - - - 0.958 - - hook microtubule-tethering protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-159]

There are 1312 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA