Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-266k8.3

Gene Name Gene ID Reads Annotation
si:ch211-266k8.3 si:ch211-266k8.3 250










Genes with expression patterns similar to si:ch211-266k8.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-266k8.3 si:ch211-266k8.3 250 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000
2. ttyh2l ENSDARG00000010727 204 1.639 0.780 - - - - 0.859 - - - tweety homolog 2, like [Source:ZFIN;Acc:ZDB-GENE-040426-2394]
3. zgc:193711 ENSDARG00000101901 503 1.609 - - - - - 0.759 - 0.850 - zgc:193711 [Source:ZFIN;Acc:ZDB-GENE-081022-34]
4. arl9 ENSDARG00000071881 403 1.608 0.778 - - - - - 0.830 - - ADP-ribosylation factor-like 9 [Source:ZFIN;Acc:ZDB-GENE-060825-210]
5. itpr3 ENSDARG00000061741, ENSDARG00000112936 707 1.599 - - - - - - 0.787 0.812 - inositol 1,4,5-trisphosphate receptor, type 3 [Source:ZFIN;Acc:ZDB-GENE-070605-1]
6. im:7148400 im:7148400 787 1.586 - - - - - 0.705 - 0.881 -
7. si:dkey-6f10.3 ENSDARG00000093660 116 1.519 0.796 - - - - - 0.723 - - si:dkey-6f10.3 [Source:ZFIN;Acc:ZDB-GENE-041210-339]
8. si:dkeyp-72g9.4 ENSDARG00000073704 98 1.518 - - - - - 0.706 0.812 - - si:dkeyp-72g9.4 [Source:ZFIN;Acc:ZDB-GENE-031204-23]
9. ly75 ENSDARG00000053113 196 1.468 0.763 - - - - - 0.705 - - lymphocyte antigen 75 [Source:ZFIN;Acc:ZDB-GENE-050309-166]
10. tbc1d23 ENSDARG00000044357, ENSDARG00000109696 6272 1.453 - - - - - - 0.716 0.737 - TBC1 domain family, member 23 [Source:ZFIN;Acc:ZDB-GENE-040426-1253]
11. med22 ENSDARG00000014148 1307 1.408 0.706 - - - - - 0.702 - - mediator complex subunit 22 [Source:ZFIN;Acc:ZDB-GENE-040625-156]
12. ngf ngf 278 0.904 - - - - - - 0.904 - -
13. spata5l1 ENSDARG00000061763 127 0.902 0.902 - - - - - - - - spermatogenesis associated 5-like 1 [Source:ZFIN;Acc:ZDB-GENE-060929-204]
14. pdpk1a ENSDARG00000062304 213 0.893 - - - - - 0.893 - - - 3-phosphoinositide dependent protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-109]
15. ftr24 ENSDARG00000008396, ENSDARG00000112253 1652 0.888 - - - - - - 0.888 - - finTRIM family, member 24 [Source:ZFIN;Acc:ZDB-GENE-050731-2]
16. cry3 cry3 483 0.885 - - - - - 0.885 - - -
17. C2H1orf27 245 0.868 - - - - - 0.868 - - - c2h1orf27 homolog (H. sapiens), transcript variant X1
18. NAGPA ENSDARG00000075149 983 0.867 - - - - - 0.867 - - - N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070928-4]
19. si:ch211-190k17.13 si:ch211-190k17.13 48 0.867 - - - - - - - 0.867 -
20. CR735107.2 CR735107.2 476 0.867 - - - - - - - 0.867 -
21. masp2 ENSDARG00000007988 331 0.862 - - - - - 0.862 - - - mannan-binding lectin serine peptidase 2 [Source:ZFIN;Acc:ZDB-GENE-060130-154]
22. ARHGAP6 33 0.86 - - - - - 0.860 - - - Rho GTPase activating protein 6
23. qsox1 ENSDARG00000039459 320 0.855 - - - - - 0.855 - - - quiescin Q6 sulfhydryl oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7019]
24. fmnl2b ENSDARG00000075041 1744 0.85 - - - - - - - 0.850 - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
25. CABZ01003022.1 CABZ01003022.1 507 0.848 - - - - - - 0.848 - -
26. ppip5k2 ENSDARG00000078441 1074 0.847 - - - - - - 0.847 - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
27. nrp2a_1 ENSDARG00000096546 3358 0.846 - - - - - - - 0.846 - neuropilin 2a [Source:ZFIN;Acc:ZDB-GENE-040611-2]
28. MCOLN3_1 MCOLN3_1 192 0.846 - - - - - - - 0.846 -
29. ift57 ENSDARG00000021022 288 0.843 0.843 - - - - - - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
30. si:dkey-234h16.7 ENSDARG00000095754 115 0.843 - - - - - 0.843 - - - si:dkey-234h16.7 [Source:ZFIN;Acc:ZDB-GENE-060601-3]
31. si:ch211-161h7.6 si:ch211-161h7.6 129 0.841 - - - - - 0.841 - - -
32. SHROOM3 ENSDARG00000102180 419 0.84 - - - - - - 0.840 - - shroom family member 3 [Source:ZFIN;Acc:ZDB-GENE-120817-1]
33. mtif3 ENSDARG00000039649 464 0.838 - - - - - - 0.838 - - mitochondrial translational initiation factor 3 [Source:ZFIN;Acc:ZDB-GENE-060228-1]
34. C8H1orf228 C8H1orf228 72 0.837 0.837 - - - - - - - -
35. CDH8 172 0.833 0.833 - - - - - - - - cadherin 8
36. C6H17orf67 C6H17orf67 687 0.831 - - - - - 0.831 - - -
37. carf ENSDARG00000019950 303 0.83 - - - - - - - 0.830 - calcium responsive transcription factor [Source:ZFIN;Acc:ZDB-GENE-070912-172]
38. bckdhbl ENSDARG00000093569 2166 0.83 - - - - - 0.830 - - - branched chain keto acid dehydrogenase E1, beta polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-060830-1]
39. ptpn6 ENSDARG00000089043 168 0.83 - - - - - - 0.830 - - protein tyrosine phosphatase, non-receptor type 6 [Source:ZFIN;Acc:ZDB-GENE-030131-7513]
40. epor_1 ENSDARG00000090834 366 0.828 0.828 - - - - - - - - erythropoietin receptor [Source:ZFIN;Acc:ZDB-GENE-071116-1]
41. CEP170B ENSDARG00000074636 336 0.825 0.825 - - - - - - - - centrosomal protein 170B [Source:ZFIN;Acc:ZDB-GENE-131127-515]
42. erbb3a ENSDARG00000006202 903 0.825 - - - - - 0.825 - - - erb-b2 receptor tyrosine kinase 3a [Source:ZFIN;Acc:ZDB-GENE-030916-3]
43. cyp17a1 ENSDARG00000033566 284 0.824 - - - - - 0.824 - - - cytochrome P450, family 17, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040213-2]
44. ap4b1 ENSDARG00000013726 382 0.824 0.824 - - - - - - - - adaptor related protein complex 4 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1284]
45. hcn4l ENSDARG00000074419 46 0.823 0.823 - - - - - - - - hyperpolarization activated cyclic nucleotide-gated potassium channel 4l [Source:ZFIN;Acc:ZDB-GENE-110411-3]
46. si:ch73-196k8.2 si:ch73-196k8.2 427 0.823 0.823 - - - - - - - -
47. nr2c2 ENSDARG00000042477 356 0.822 0.822 - - - - - - - - nuclear receptor subfamily 2, group C, member 2 [Source:ZFIN;Acc:ZDB-GENE-080403-8]
48. aagab ENSDARG00000041170, ENSDARG00000117041 1042 0.819 - - - - - - 0.819 - - alpha and gamma adaptin binding protein [Source:ZFIN;Acc:ZDB-GENE-040718-120]
49. CCDC108 CCDC108 74 0.818 0.818 - - - - - - - -
50. phactr4a ENSDARG00000015552 1315 0.818 - - - - - 0.818 - - - phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
51. EPHA2 EPHA2 867 0.818 - - - - - 0.818 - - -
52. poldip2 ENSDARG00000092305, ENSDARG00000112927, ENSDARG00000117099 88 0.816 0.816 - - - - - - - - polymerase (DNA-directed), delta interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5881]
53. FAM163A ENSDARG00000093021 86 0.816 0.816 - - - - - - - - family with sequence similarity 163 member A [Source:HGNC Symbol;Acc:HGNC:28274]
54. wnt7bb ENSDARG00000071107 1158 0.816 - - - - - - 0.816 - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
55. BX640398.1 ENSDARG00000097190 219 0.816 - - - - - 0.816 - - -
56. si:dkey-270b7.1 si:dkey-270b7.1 83 0.815 0.815 - - - - - - - -
57. tspan9b ENSDARG00000045706, ENSDARG00000110620, ENSDARG00000111048 2161 0.815 - - - - - - - 0.815 - tetraspanin 9b [Source:ZFIN;Acc:ZDB-GENE-040704-25]
58. adam8a ENSDARG00000001452 316 0.814 - - - - - - - 0.814 - ADAM metallopeptidase domain 8a [Source:ZFIN;Acc:ZDB-GENE-030616-622]
59. mcu ENSDARG00000101175 1287 0.814 - - - - - 0.814 - - - mitochondrial calcium uniporter [Source:ZFIN;Acc:ZDB-GENE-061013-24]
60. si:ch211-262h13.3 ENSDARG00000070898 2094 0.812 - - - - - - 0.812 - - si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
61. CMTM8 CMTM8 71 0.812 0.812 - - - - - - - -
62. cnp_1 ENSDARG00000070822 249 0.811 0.811 - - - - - - - - 2',3'-cyclic nucleotide 3' phosphodiesterase [Source:ZFIN;Acc:ZDB-GENE-030521-29]
63. RELL1 ENSDARG00000018312 579 0.811 - - - - - - 0.811 - - RELT like 1 [Source:ZFIN;Acc:ZDB-GENE-161213-2]
64. ostm1 ENSDARG00000069808 1024 0.811 - - - - - 0.811 - - - osteopetrosis associated transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-081104-270]
65. si:ch211-110e4.2 si:ch211-110e4.2 12 0.81 0.810 - - - - - - - -
66. htr1fa ENSDARG00000002773, ENSDARG00000109862 38 0.81 0.810 - - - - - - - - 5-hydroxytryptamine (serotonin) receptor 1Fa [Source:ZFIN;Acc:ZDB-GENE-081105-125]
67. grk7b ENSDARG00000055534 17 0.81 0.810 - - - - - - - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
68. gcdhl gcdhl 38 0.81 0.810 - - - - - - - -
69. thtpa ENSDARG00000063049 286 0.809 0.809 - - - - - - - - thiamine triphosphatase [Source:ZFIN;Acc:ZDB-GENE-070502-2]
70. casp9 ENSDARG00000004325 306 0.809 0.809 - - - - - - - - caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
71. zdhhc6 ENSDARG00000075721 1494 0.809 - - - - - - - 0.809 - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
72. chmp3 ENSDARG00000038064 577 0.808 - - - - - - - 0.808 - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
73. GALNT3 ENSDARG00000108649 356 0.808 - - - - - 0.808 - - - polypeptide N-acetylgalactosaminyltransferase 3 [Source:HGNC Symbol;Acc:HGNC:4125]
74. si:dkey-56e3.3 ENSDARG00000075194 491 0.808 - - - - - - 0.808 - - si:dkey-56e3.3 [Source:ZFIN;Acc:ZDB-GENE-050411-91]
75. TRIM35_10 TRIM35_10 484 0.807 0.807 - - - - - - - -
76. zgc:63831 ENSDARG00000009313 895 0.806 - - - - - 0.806 - - - zgc:63831 [Source:ZFIN;Acc:ZDB-GENE-030131-8690]
77. si:dkey-238c7.13 si:dkey-238c7.13 57 0.806 - - - - - 0.806 - - -
78. ctu1 ENSDARG00000020986 135 0.806 0.806 - - - - - - - - cytosolic thiouridylase subunit 1 homolog (S. pombe) [Source:ZFIN;Acc:ZDB-GENE-040426-704]
79. AP5B1 ENSDARG00000078805 62 0.805 0.805 - - - - - - - - adaptor related protein complex 5 subunit beta 1 [Source:ZFIN;Acc:ZDB-GENE-131121-204]
80. TMEM120A ENSDARG00000030914 266 0.805 - - - - - 0.805 - - - transmembrane protein 120A [Source:ZFIN;Acc:ZDB-GENE-070424-21]
81. march5l ENSDARG00000028559 943 0.804 - - - - - - 0.804 - - membrane-associated ring finger (C3HC4) 5, like [Source:ZFIN;Acc:ZDB-GENE-030131-4792]
82. nsl1 ENSDARG00000024471 1269 0.804 - - - - - - - 0.804 - NSL1, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-041014-362]
83. igf1rb ENSDARG00000034434, ENSDARG00000110935 813 0.804 - - - - - - - 0.804 - insulin-like growth factor 1b receptor [Source:ZFIN;Acc:ZDB-GENE-020503-2]
84. hs3st3b1b ENSDARG00000086645, ENSDARG00000113233 1194 0.804 - - - - - - - 0.804 - heparan sulfate (glucosamine) 3-O-sulfotransferase 3B1b [Source:ZFIN;Acc:ZDB-GENE-070202-5]
85. si:dkey-40c11.2 ENSDARG00000032482 228 0.804 - - - - - 0.804 - - - si:dkey-40c11.2 [Source:ZFIN;Acc:ZDB-GENE-060526-300]
86. fxyd6 ENSDARG00000100971 51 0.804 0.804 - - - - - - - - FXYD domain containing ion transport regulator 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5919]
87. nostrin ENSDARG00000077866 85 0.803 0.803 - - - - - - - - nitric oxide synthase trafficking [Source:ZFIN;Acc:ZDB-GENE-070522-2]
88. RNF219 ENSDARG00000090904 176 0.802 0.802 - - - - - - - - ring finger protein 219 [Source:HGNC Symbol;Acc:HGNC:20308]
89. zgc:113443 359 0.802 0.802 - - - - - - - - zgc:113443, transcript variant X3
90. adrb2a ENSDARG00000088124 324 0.801 - - - - - - 0.801 - - adrenoceptor beta 2, surface a [Source:ZFIN;Acc:ZDB-GENE-100414-3]
91. anapc5 ENSDARG00000008461 434 0.8 0.800 - - - - - - - - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
92. pptc7a ENSDARG00000011122 739 0.799 - - - - - 0.799 - - - PTC7 protein phosphatase homolog a [Source:ZFIN;Acc:ZDB-GENE-041114-74]
93. sec61b ENSDARG00000076568 11859 0.798 - - - - - 0.798 - - - Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
94. faub ENSDARG00000043663, ENSDARG00000111416, ENSDARG00000113054 1451 0.798 - - - - - - - 0.798 - Finkel-Biskis-Reilly murine sarcoma virus (FBR-MuSV) ubiquitously expressed b [Source:ZFIN;Acc:ZDB-GENE-050417-416]
95. sarm1 ENSDARG00000010610 387 0.797 - - - - - - 0.797 - - sterile alpha and TIR motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-040219-1]
96. sfxn1 ENSDARG00000019963 1689 0.795 - - - - - 0.795 - - - sideroflexin 1 [Source:ZFIN;Acc:ZDB-GENE-040801-45]
97. akap9 ENSDARG00000079610 654 0.794 - - - - - 0.794 - - - A kinase (PRKA) anchor protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-7276]
98. si:ch211-126i22.5 ENSDARG00000060911 209 0.794 0.794 - - - - - - - - si:ch211-126i22.5 [Source:ZFIN;Acc:ZDB-GENE-091204-183]
99. zgc:64085 zgc:64085 955 0.792 - - - - - 0.792 - - -
100. tmem168b ENSDARG00000062168 17 0.791 0.791 - - - - - - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]

There are 367 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA