Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-266d19.4

Gene Name Gene ID Reads Annotation
si:ch211-266d19.4 ENSDARG00000012642 1251 si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]










Genes with expression patterns similar to si:ch211-266d19.4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-266d19.4 ENSDARG00000012642 1251 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-266d19.4 [Source:ZFIN;Acc:ZDB-GENE-091204-74]
2. acss2 ENSDARG00000037781, ENSDARG00000112371 3100 2.442 - 0.738 0.999 - - - 0.705 - - acyl-CoA synthetase short chain family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-388]
3. si:ch211-216l23.2 ENSDARG00000069122, ENSDARG00000115838 1365 1.806 - - 0.998 - - - - 0.808 - si:ch211-216l23.2 [Source:ZFIN;Acc:ZDB-GENE-030131-3806]
4. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 1.789 - - 0.999 0.790 - - - - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
5. lipg ENSDARG00000031044 1516 1.782 - - 0.999 - - 0.783 - - - lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]
6. stip1 ENSDARG00000004906 7742 1.766 - - 0.989 - - 0.777 - - - stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
7. umps ENSDARG00000012215 4564 1.759 - - 0.898 - - - - 0.861 - uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
8. cops7a ENSDARG00000022788, ENSDARG00000112421 5302 1.746 - - 0.995 - - 0.751 - - - COP9 constitutive photomorphogenic homolog subunit 7A [Source:ZFIN;Acc:ZDB-GENE-030131-8680]
9. cops5 ENSDARG00000057624 1485 1.735 - 0.737 0.998 - - - - - - COP9 signalosome subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1686]
10. srsf6b ENSDARG00000016783 9926 1.718 - - 0.970 - - 0.748 - - - serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
11. AL772300.3 AL772300.3 1752 1.714 - 0.716 0.998 - - - - - -
12. sepw2a 8597 1.703 - - 0.987 - - 0.716 - - - selenoprotein W, 2a
13. btg2 ENSDARG00000020298 6616 1.694 - - 0.982 - - 0.712 - - - B-cell translocation gene 2 [Source:ZFIN;Acc:ZDB-GENE-000210-15]
14. hdgfrp2 7462 1.663 - - 0.938 - - 0.725 - - - hepatoma-derived growth factor-related protein 2, transcript variant X1
15. arl6ip1 ENSDARG00000054578, ENSDARG00000112340 11714 1.653 - - 0.937 - - 0.716 - - - ADP-ribosylation factor-like 6 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1087]
16. nrxn2b ENSDARG00000063150 343 1.6 - - - 0.792 - - - 0.808 - neurexin 2b [Source:ZFIN;Acc:ZDB-GENE-070206-7]
17. setd1a ENSDARG00000060030 874 1.598 - - - - - 0.852 - 0.746 - SET domain containing 1A [Source:ZFIN;Acc:ZDB-GENE-080521-4]
18. GANAB_2 GANAB_2 3210 1.597 - - 0.861 - - 0.736 - - -
19. tmem222a ENSDARG00000069589 1766 1.588 - - - - - 0.733 0.855 - - transmembrane protein 222a [Source:ZFIN;Acc:ZDB-GENE-050306-17]
20. RBM26 ENSDARG00000104130 1012 1.587 - 0.763 - - - - - 0.824 - RNA binding motif protein 26 [Source:ZFIN;Acc:ZDB-GENE-050706-50]
21. zdhhc13 ENSDARG00000101144 647 1.585 - - - 0.811 - - 0.774 - - zinc finger, DHHC-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-041212-79]
22. trappc5 ENSDARG00000026068 1350 1.577 - - - - - - 0.709 0.868 - trafficking protein particle complex 5 [Source:ZFIN;Acc:ZDB-GENE-040718-185]
23. mmp14a ENSDARG00000002235 911 1.575 - - - - - 0.775 0.800 - - matrix metallopeptidase 14a (membrane-inserted) [Source:ZFIN;Acc:ZDB-GENE-030901-1]
24. RSPH1 289 1.567 0.752 - - - - - - 0.815 - radial spoke head 1 homolog (Chlamydomonas), transcript variant X2
25. b4galt6 ENSDARG00000010301 2005 1.548 - 0.826 - - - 0.722 - - - UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
26. ammecr1 ENSDARG00000012892 14475 1.547 - - 0.810 - - 0.737 - - - Alport syndrome, mental retardation, midface hypoplasia and elliptocytosis chromosomal region gene 1 homolog (human) [Source:ZFIN;Acc:ZDB-GENE-040426-1533]
27. isoc1 ENSDARG00000060069 1621 1.538 - - - - - 0.767 - 0.771 - isochorismatase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061020-1]
28. blcap ENSDARG00000052073 8646 1.535 - - 0.834 - - 0.701 - - - bladder cancer associated protein [Source:ZFIN;Acc:ZDB-GENE-000330-7]
29. rpap1 ENSDARG00000075072, ENSDARG00000117161 250 1.533 - - - 0.774 - - 0.759 - - RNA polymerase II associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-090914-1]
30. nrp2b ENSDARG00000038446 783 1.527 - - - - - - 0.711 0.816 - neuropilin 2b [Source:ZFIN;Acc:ZDB-GENE-040611-3]
31. adora1 adora1 149 1.523 - - - 0.709 - - - 0.814 -
32. CR559945.3 CR559945.3 1029 1.522 - 0.790 - - - - - 0.732 -
33. akt2 ENSDARG00000011219 647 1.513 - - - - - 0.704 - 0.809 - v-akt murine thymoma viral oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-031007-5]
34. gid8a ENSDARG00000022768 1470 1.513 - 0.771 - 0.742 - - - - - GID complex subunit 8 homolog a (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1669]
35. sik2a ENSDARG00000079618, ENSDARG00000115529 65 1.513 - - - 0.744 - - 0.769 - - salt-inducible kinase 2a [Source:ZFIN;Acc:ZDB-GENE-070705-451]
36. pgm2 ENSDARG00000018178 985 1.51 - 0.754 - - - - 0.756 - - phosphoglucomutase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2218]
37. gnsa ENSDARG00000023766 545 1.503 - 0.793 - - - 0.710 - - - glucosamine (N-acetyl)-6-sulfatase a [Source:ZFIN;Acc:ZDB-GENE-050107-5]
38. tmem161b ENSDARG00000055989 680 1.499 - - - 0.730 - - - 0.769 - transmembrane protein 161B [Source:ZFIN;Acc:ZDB-GENE-040426-2693]
39. pax3a ENSDARG00000010192 626 1.491 - - - 0.760 - 0.731 - - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
40. TCAIM ENSDARG00000079881 424 1.49 - - - - - 0.718 - 0.772 - T cell activation inhibitor, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-160113-67]
41. pik3c3 ENSDARG00000054829 559 1.484 - 0.702 - - - - - 0.782 - phosphatidylinositol 3-kinase, catalytic subunit type 3 [Source:ZFIN;Acc:ZDB-GENE-050410-13]
42. DENND6A DENND6A 648 1.481 - - - - - 0.779 0.702 - -
43. cwc22 ENSDARG00000014008 2385 1.479 0.715 0.764 - - - - - - - CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
44. stmn4 ENSDARG00000030106 518 1.479 - - - 0.754 - 0.725 - - - stathmin-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2732]
45. dhx38 ENSDARG00000100013 1854 1.477 - 0.766 - - - 0.711 - - - DEAH (Asp-Glu-Ala-His) box polypeptide 38 [Source:ZFIN;Acc:ZDB-GENE-040426-1144]
46. chst12a ENSDARG00000028786 598 1.477 - - - 0.706 - - - 0.771 - carbohydrate (chondroitin 4) sulfotransferase 12a [Source:ZFIN;Acc:ZDB-GENE-081022-13]
47. rabif ENSDARG00000002690, ENSDARG00000114340 891 1.474 0.767 - - - - 0.707 - - - RAB interacting factor [Source:ZFIN;Acc:ZDB-GENE-040718-216]
48. acbd5a ENSDARG00000034883 300 1.457 - - - 0.705 - - 0.752 - - acyl-CoA binding domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-050522-268]
49. atp6ap1a ENSDARG00000041417 898 1.456 - - - - - 0.708 - 0.748 - ATPase H+ transporting accessory protein 1a [Source:ZFIN;Acc:ZDB-GENE-090312-136]
50. prnprs3 ENSDARG00000003705 1854 1.452 - 0.708 - - - 0.744 - - - prion protein, related sequence 3 [Source:ZFIN;Acc:ZDB-GENE-041221-3]
51. tnika ENSDARG00000056218 728 1.451 - - - 0.751 - 0.700 - - - TRAF2 and NCK interacting kinase a [Source:ZFIN;Acc:ZDB-GENE-030131-3767]
52. tnfaip3 ENSDARG00000027777 1066 1.451 - 0.732 - - - 0.719 - - - tumor necrosis factor, alpha-induced protein 3 [Source:ZFIN;Acc:ZDB-GENE-100212-2]
53. nudt22 ENSDARG00000071671 411 1.45 - 0.723 - 0.727 - - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 22 [Source:ZFIN;Acc:ZDB-GENE-041010-171]
54. mkrn4 ENSDARG00000028295 2768 1.44 - - - - - 0.717 0.723 - - makorin, ring finger protein, 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5954]
55. mamdc1 mamdc1 156 1.436 - - - - - 0.730 0.706 - -
56. ift57 ENSDARG00000021022 288 1.434 0.723 - - - - 0.711 - - - intraflagellar transport 57 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-1]
57. CASS4 ENSDARG00000006775 760 1.432 - - - 0.712 - 0.720 - - - Cas scaffold protein family member 4 [Source:ZFIN;Acc:ZDB-GENE-110131-9]
58. endog ENSDARG00000058865 679 1.416 - - - - - 0.715 0.701 - - endonuclease G [Source:ZFIN;Acc:ZDB-GENE-050522-402]
59. tubgcp4 ENSDARG00000005374 208 1.415 - - - 0.709 0.706 - - - - tubulin, gamma complex associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-081022-124]
60. poc5 ENSDARG00000059982 569 0.999 - - 0.999 - - - - - - POC5 centriolar protein homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-060526-135]
61. PRIMPOL ENSDARG00000033273, ENSDARG00000111555 918 0.999 - - 0.999 - - - - - - primase and polymerase (DNA-directed) [Source:ZFIN;Acc:ZDB-GENE-051113-100]
62. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 0.999 - - 0.999 - - - - - - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
63. lmx1bb ENSDARG00000068365 627 0.999 - - 0.999 - - - - - - LIM homeobox transcription factor 1, beta b [Source:ZFIN;Acc:ZDB-GENE-050114-2]
64. eif3k ENSDARG00000068289 1102 0.999 - - 0.999 - - - - - - eukaryotic translation initiation factor 3, subunit K [Source:ZFIN;Acc:ZDB-GENE-050417-45]
65. hyi ENSDARG00000030166 1199 0.999 - - 0.999 - - - - - - hydroxypyruvate isomerase [Source:ZFIN;Acc:ZDB-GENE-040426-1273]
66. C5H2orf68 C5H2orf68 849 0.999 - - 0.999 - - - - - -
67. trps1 ENSDARG00000104082 918 0.999 - - 0.999 - - - - - - trichorhinophalangeal syndrome I [Source:ZFIN;Acc:ZDB-GENE-030131-8404]
68. arl15b ENSDARG00000057995, ENSDARG00000109775 1243 0.999 - - 0.999 - - - - - - ADP-ribosylation factor-like 15b [Source:ZFIN;Acc:ZDB-GENE-080813-2]
69. zdhhc6 ENSDARG00000075721 1494 0.999 - - 0.999 - - - - - - zinc finger, DHHC-type containing 6 [Source:ZFIN;Acc:ZDB-GENE-030131-3189]
70. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.999 - - 0.999 - - - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
71. taok2b_1 ENSDARG00000100620 2082 0.999 - - 0.999 - - - - - - TAO kinase 2b [Source:ZFIN;Acc:ZDB-GENE-110603-3]
72. map3k3 ENSDARG00000060348 1482 0.999 - - 0.999 - - - - - - mitogen-activated protein kinase kinase kinase 3 [Source:ZFIN;Acc:ZDB-GENE-070910-1]
73. pde12 ENSDARG00000030964 615 0.999 - - 0.999 - - - - - - phosphodiesterase 12 [Source:ZFIN;Acc:ZDB-GENE-060519-25]
74. egr2a ENSDARG00000044098 1101 0.999 - - 0.999 - - - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
75. wnt7bb ENSDARG00000071107 1158 0.999 - - 0.999 - - - - - - wingless-type MMTV integration site family, member 7Bb [Source:ZFIN;Acc:ZDB-GENE-081006-1]
76. METTL18 ENSDARG00000074588 918 0.999 - - 0.999 - - - - - - methyltransferase like 18 [Source:HGNC Symbol;Acc:HGNC:28793]
77. FUZ ENSDARG00000079730 821 0.999 - - 0.999 - - - - - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
78. slc4a2b ENSDARG00000052330 1900 0.999 - - 0.999 - - - - - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
79. brd8 ENSDARG00000025071 2605 0.998 - - 0.998 - - - - - - bromodomain containing 8 [Source:ZFIN;Acc:ZDB-GENE-030722-10]
80. rad54l ENSDARG00000018623 837 0.998 - - 0.998 - - - - - - RAD54 like [Source:ZFIN;Acc:ZDB-GENE-040426-968]
81. pgam5 ENSDARG00000035608 4044 0.998 - - 0.998 - - - - - - PGAM family member 5, serine/threonine protein phosphatase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-030131-683]
82. sypl2b ENSDARG00000000690 2006 0.998 - - 0.998 - - - - - - synaptophysin-like 2b [Source:ZFIN;Acc:ZDB-GENE-050417-309]
83. si:ch211-10d23.5 ENSDARG00000095510 2632 0.998 - - 0.998 - - - - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
84. CABZ01034082.1 ENSDARG00000099583 2237 0.998 - - 0.998 - - - - - -
85. aup1 ENSDARG00000092609 2431 0.998 - - 0.998 - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
86. dnajc2 ENSDARG00000070477 902 0.998 - - 0.998 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1912]
87. DACT3_1 DACT3_1 1235 0.998 - - 0.998 - - - - - -
88. tbp ENSDARG00000014994 1591 0.998 - - 0.998 - - - - - - TATA box binding protein [Source:ZFIN;Acc:ZDB-GENE-030616-563]
89. GSG2 GSG2 1162 0.998 - - 0.998 - - - - - -
90. abca3b ENSDARG00000100524 2416 0.998 - - 0.998 - - - - - - ATP-binding cassette, sub-family A (ABC1), member 3b [Source:ZFIN;Acc:ZDB-GENE-050517-2]
91. ptbp2a ENSDARG00000101947 1921 0.998 - - 0.998 - - - - - - polypyrimidine tract binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-050320-141]
92. PYURF ENSDARG00000045773 4576 0.998 - - 0.998 - - - - - - PIGY upstream reading frame [Source:HGNC Symbol;Acc:HGNC:44317]
93. suz12a ENSDARG00000070256 2229 0.998 - - 0.998 - - - - - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
94. rab35 rab35 1287 0.998 - - 0.998 - - - - - -
95. rnmt ENSDARG00000070553 1743 0.997 - - 0.997 - - - - - - RNA (guanine-7-) methyltransferase [Source:ZFIN;Acc:ZDB-GENE-041008-25]
96. dnaja3a ENSDARG00000058494, ENSDARG00000111151 2497 0.997 - - 0.997 - - - - - - DnaJ (Hsp40) homolog, subfamily A, member 3A [Source:ZFIN;Acc:ZDB-GENE-030131-7837]
97. serpine2 ENSDARG00000029353 2274 0.997 - - 0.997 - - - - - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-848]
98. matr3l1.1_1 ENSDARG00000000394, ENSDARG00000001162 1860 0.997 - - 0.997 - - - - - - matrin 3-like 1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-40]
99. fam118b ENSDARG00000078983 1822 0.997 - - 0.997 - - - - - - family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
100. hmbox1a ENSDARG00000027082 2569 0.997 - - 0.997 - - - - - - homeobox containing 1a [Source:ZFIN;Acc:ZDB-GENE-050913-89]

There are 1353 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA