Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-261n9.3

Gene Name Gene ID Reads Annotation
si:ch211-261n9.3 si:ch211-261n9.3 2










Genes with expression patterns similar to si:ch211-261n9.3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. abcg4b ENSDARG00000078068 180 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family G (WHITE), member 4b [Source:ZFIN;Acc:ZDB-GENE-080215-10]
2. mxtx1 ENSDARG00000069382 32 1 - - - - - 1.000 - - - mix-type homeobox gene 1 [Source:ZFIN;Acc:ZDB-GENE-000710-7]
3. ANGEL1 ENSDARG00000077567 38 1 - - - - - 1.000 - - - angel homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-111020-12]
4. PEG3_10 PEG3_10 45 1 - - - - - 1.000 - - -
5. yif1b ENSDARG00000040505 47 1 - - - - - 1.000 - - - Yip1 interacting factor homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-041114-16]
6. OVOL1 75 1 - - - - - 1.000 - - - ovo-like zinc finger 1, transcript variant X1
7. ttll2 ENSDARG00000077853 9 1 - - - - - 1.000 - - - tubulin tyrosine ligase-like family, member 2 [Source:ZFIN;Acc:ZDB-GENE-041014-297]
8. hsd17b1 ENSDARG00000027469 11 1 - - - - - 1.000 - - - hydroxysteroid (17-beta) dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-040901-5]
9. WNT6 WNT6 11 1 - - - - - 1.000 - - -
10. FRMPD2 ENSDARG00000074119 5 1 - - - - - 1.000 - - - FERM and PDZ domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110315-2]
11. arhgef6 ENSDARG00000006683 59 1 - - - - - 1.000 - - - Rac/Cdc42 guanine nucleotide exchange factor (GEF) 6 [Source:ZFIN;Acc:ZDB-GENE-101013-2]
12. BX004980.1 ENSDARG00000099680 10 1 - - - - - 1.000 - - -
13. si:ch211-223a21.3 ENSDARG00000104737 28 1 - - - - - 1.000 - - - si:ch211-223a21.3 [Source:ZFIN;Acc:ZDB-GENE-110913-50]
14. cyp27c1 ENSDARG00000092660 2 1 - - - - - 1.000 - - - cytochrome P450, family 27, subfamily C, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-080204-68]
15. necab1 ENSDARG00000056566, ENSDARG00000111028 26 1 - - - - - 1.000 - - - N-terminal EF-hand calcium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-395]
16. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 1 - - - - - 1.000 - - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
17. si:ch211-261n9.3 si:ch211-261n9.3 2 1 - - - - - 1.000 - - -
18. pcyox1 ENSDARG00000103052 20 1 - - - - - 1.000 - - - prenylcysteine oxidase 1 [Source:ZFIN;Acc:ZDB-GENE-050417-98]
19. zgc:171779 ENSDARG00000016908 26 1 - - - - - 1.000 - - - zgc:171779 [Source:ZFIN;Acc:ZDB-GENE-071004-38]
20. otogl ENSDARG00000088750 2 1 - - - - - 1.000 - - - otogelin-like [Source:ZFIN;Acc:ZDB-GENE-050419-93]
21. zgc:103519 zgc:103519 3 1 - - - - - 1.000 - - -
22. BX649490.1 ENSDARG00000091718 7 1 - - - - - 1.000 - - - titin-like [Source:NCBI gene;Acc:101883412]
23. CABZ01080492.1 CABZ01080492.1 495 1 - - - - - 1.000 - - -
24. RP1L1 RP1L1 15 1 - - - - - 1.000 - - -
25. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - - - - - 1.000 - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
26. fut10 ENSDARG00000100322 22 1 - - - - - 1.000 - - - fucosyltransferase 10 [Source:ZFIN;Acc:ZDB-GENE-081022-183]
27. DHDH DHDH 15 1 - - - - - 1.000 - - -
28. NXPH4 11 1 - - - - - 1.000 - - - neurexophilin 4
29. RFESD_2 RFESD_2 29 1 - - - - - 1.000 - - -
30. abca4a ENSDARG00000057169 27 1 - - - - - 1.000 - - - ATP-binding cassette, sub-family A (ABC1), member 4a [Source:ZFIN;Acc:ZDB-GENE-050517-3]
31. gata1b ENSDARG00000059130 151 1 - - - - - 1.000 - - - GATA binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-081104-43]
32. CABZ01118627.1 CABZ01118627.1 18 1 - - - - - 1.000 - - -
33. egr2a ENSDARG00000044098 1101 1 - - - - - 1.000 - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
34. zgc:174654 zgc:174654 54 1 - - - - - 1.000 - - -
35. si:ch211-213a13.11 si:ch211-213a13.11 9 0.998 - - - - - 0.998 - - -
36. fermt3a fermt3a 56 0.998 - - - - - 0.998 - - -
37. mxra5b ENSDARG00000076309 190 0.996 - - - - - 0.996 - - - matrix-remodelling associated 5b [Source:ZFIN;Acc:ZDB-GENE-081104-119]
38. FILIP1 339 0.995 - - - - - 0.995 - - - filamin A interacting protein 1
39. ugt2b3 46 0.993 - - - - - 0.993 - - - UDP glucuronosyltransferase 2 family, polypeptide B3
40. dlx1a ENSDARG00000013125 142 0.993 - - - - - 0.993 - - - distal-less homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-990415-48]
41. ENSDARG00000078787 ENSDARG00000078787 97 0.99 - - - - - 0.990 - - -
42. angptl6 ENSDARG00000020265 273 0.99 - - - - - 0.990 - - - angiopoietin-like 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9735]
43. CU695006.1 CU695006.1 4 0.99 - - - - - 0.990 - - -
44. si:ch73-290k24.5 ENSDARG00000076310 39 0.99 - - - - - 0.990 - - - si:ch73-290k24.5 [Source:ZFIN;Acc:ZDB-GENE-110411-284]
45. plcd1a ENSDARG00000059123 46 0.99 - - - - - 0.990 - - - phospholipase C, delta 1a [Source:ZFIN;Acc:ZDB-GENE-071004-78]
46. ascc2 ENSDARG00000013058 228 0.989 - - - - - 0.989 - - - activating signal cointegrator 1 complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1223]
47. si:ch211-260b17.6 32 0.988 - - - - - 0.988 - - - si:ch211-260b17.6
48. mpeg1 mpeg1 123 0.983 - - - - - 0.983 - - -
49. tango6 ENSDARG00000034001 203 0.983 - - - - - 0.983 - - - transport and golgi organization 6 homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-050419-237]
50. col8a1b ENSDARG00000003533 18 0.982 - - - - - 0.982 - - - collagen, type VIII, alpha 1b [Source:ZFIN;Acc:ZDB-GENE-060503-140]
51. SLC2A11 SLC2A11 5 0.981 - - - - - 0.981 - - -
52. GPC5 GPC5 11 0.979 - - - - - 0.979 - - -
53. CAPN1_1 ENSDARG00000055338 288 0.978 - - - - - 0.978 - - - calpain 1 [Source:HGNC Symbol;Acc:HGNC:1476]
54. wdr4 ENSDARG00000090581 42 0.977 - - - - - 0.977 - - - WD repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-060810-10]
55. CU694453.2 CU694453.2 13 0.976 - - - - - 0.976 - - -
56. bty bty 752 0.976 - - - - - 0.976 - - -
57. gtf3ab ENSDARG00000071583, ENSDARG00000116242 58 0.976 - - - - - 0.976 - - - general transcription factor IIIA, b [Source:ZFIN;Acc:ZDB-GENE-030131-7698]
58. sec22bb_1 ENSDARG00000100435 57 0.975 - - - - - 0.975 - - - SEC22 homolog B, vesicle trafficking protein b [Source:ZFIN;Acc:ZDB-GENE-030131-5488]
59. KCNG2 ENSDARG00000035961 58 0.975 - - - - - 0.975 - - - potassium voltage-gated channel, subfamily G, member 2 [Source:ZFIN;Acc:ZDB-GENE-100701-1]
60. si:ch211-207d6.2 ENSDARG00000031658 93 0.975 - - - - - 0.975 - - - si:ch211-207d6.2 [Source:ZFIN;Acc:ZDB-GENE-070912-185]
61. fads2 ENSDARG00000019532 152 0.975 - - - - - 0.975 - - - fatty acid desaturase 2 [Source:ZFIN;Acc:ZDB-GENE-011212-1]
62. faim2a ENSDARG00000038784 39 0.975 - - - - - 0.975 - - - Fas apoptotic inhibitory molecule 2a [Source:ZFIN;Acc:ZDB-GENE-050320-88]
63. si:dkey-199f5.6 ENSDARG00000094400 51 0.974 - - - - - 0.974 - - - si:dkey-199f5.6 [Source:ZFIN;Acc:ZDB-GENE-100922-107]
64. rag2 ENSDARG00000052121 15 0.973 - - - - - 0.973 - - - recombination activating gene 2 [Source:ZFIN;Acc:ZDB-GENE-990415-235]
65. KLF8 ENSDARG00000060661 219 0.973 - - - - - 0.973 - - - Kruppel-like factor 8 [Source:ZFIN;Acc:ZDB-GENE-070424-152]
66. si:ch211-171h4.5 ENSDARG00000077337 3 0.973 - - - - - 0.973 - - - si:ch211-171h4.5 [Source:ZFIN;Acc:ZDB-GENE-081104-151]
67. ddx43 ENSDARG00000022614 48 0.971 - - - - - 0.971 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Source:ZFIN;Acc:ZDB-GENE-080204-77]
68. BX640547.1_1 ENSDARG00000092775 76 0.971 - - - - - 0.971 - - - uncharacterized LOC110439536 [Source:NCBI gene;Acc:110439536]
69. si:dkeyp-104f11.9 ENSDARG00000096715 81 0.969 - - - - - 0.969 - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
70. ep300a ENSDARG00000100666 224 0.969 - - - - - 0.969 - - - E1A binding protein p300 a [Source:ZFIN;Acc:ZDB-GENE-080403-16]
71. si:dkey-209n16.2 ENSDARG00000095914 27 0.969 - - - - - 0.969 - - - si:dkey-209n16.2 [Source:ZFIN;Acc:ZDB-GENE-110408-44]
72. kctd3 ENSDARG00000060854 82 0.969 - - - - - 0.969 - - - potassium channel tetramerization domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-060503-169]
73. cyp2k8 ENSDARG00000101190 69 0.963 - - - - - 0.963 - - - cytochrome P450, family 2, subfamily K, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-080721-19]
74. zgc:174700_1 zgc:174700_1 60 0.962 - - - - - 0.962 - - -
75. osbpl2b ENSDARG00000013830, ENSDARG00000114103 393 0.962 - - - - - 0.962 - - - oxysterol binding protein-like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-6138]
76. CR391986.2 CR391986.2 52 0.961 - - - - - 0.961 - - -
77. fbxl18 ENSDARG00000007443, ENSDARG00000113264 178 0.961 - - - - - 0.961 - - - F-box and leucine-rich repeat protein 18 [Source:ZFIN;Acc:ZDB-GENE-050913-65]
78. qpctla ENSDARG00000061691 869 0.961 - - - - - 0.961 - - - glutaminyl-peptide cyclotransferase-like a [Source:ZFIN;Acc:ZDB-GENE-030131-1441]
79. lrp1bb ENSDARG00000061517 172 0.959 - - - - - 0.959 - - - low density lipoprotein receptor-related protein 1Bb [Source:ZFIN;Acc:ZDB-GENE-070912-401]
80. TENM3 ENSDARG00000005479 39 0.958 - - - - - 0.958 - - - teneurin transmembrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-990714-19]
81. crfb2 ENSDARG00000040332, ENSDARG00000109306, ENSDARG00000116866 21 0.957 - - - - - 0.957 - - - cytokine receptor family member b2 [Source:ZFIN;Acc:ZDB-GENE-070905-2]
82. FMNL1 FMNL1 7 0.957 - - - - - 0.957 - - -
83. tmem110 497 0.956 - - - - - 0.956 - - - transmembrane protein 110
84. SCARB2 SCARB2 24 0.954 - - - - - 0.954 - - -
85. LPIN3 LPIN3 121 0.954 - - - - - 0.954 - - -
86. arhgap25 ENSDARG00000061784 112 0.954 - - - - - 0.954 - - - Rho GTPase activating protein 25 [Source:ZFIN;Acc:ZDB-GENE-060526-210]
87. cdcp1a ENSDARG00000058943 70 0.953 - - - - - 0.953 - - - CUB domain containing protein 1a [Source:ZFIN;Acc:ZDB-GENE-050327-55]
88. arsk ENSDARG00000059714, ENSDARG00000115105 31 0.951 - - - - - 0.951 - - - arylsulfatase family, member K [Source:ZFIN;Acc:ZDB-GENE-060929-332]
89. si:dkey-8k3.2 ENSDARG00000038424 285 0.951 - - - - - 0.951 - - - si:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
90. mbip ENSDARG00000019364 238 0.949 - - - - - 0.949 - - - MAP3K12 binding inhibitory protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-43]
91. trpc1 ENSDARG00000061203 62 0.949 - - - - - 0.949 - - - transient receptor potential cation channel, subfamily C, member 1 [Source:ZFIN;Acc:ZDB-GENE-070830-1]
92. slc16a5 slc16a5 173 0.947 - - - - - 0.947 - - -
93. irf9 ENSDARG00000016457 152 0.945 - - - - - 0.945 - - - interferon regulatory factor 9 [Source:ZFIN;Acc:ZDB-GENE-040912-165]
94. abcb6b ENSDARG00000074254 600 0.944 - - - - - 0.944 - - - ATP-binding cassette, sub-family B (MDR/TAP), member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-584]
95. si:ch73-303g23.4 si:ch73-303g23.4 386 0.943 - - - - - 0.943 - - -
96. cc2d1b ENSDARG00000099445 253 0.942 - - - - - 0.942 - - - coiled-coil and C2 domain containing 1B [Source:ZFIN;Acc:ZDB-GENE-030131-1426]
97. ap5m1 ENSDARG00000031533 153 0.94 - - - - - 0.940 - - - adaptor related protein complex 5 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-050522-231]
98. OXSM ENSDARG00000098855 253 0.939 - - - - - 0.939 - - - 3-oxoacyl-ACP synthase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-170215-2]
99. chchd6b ENSDARG00000045978 251 0.938 - - - - - 0.938 - - - coiled-coil-helix-coiled-coil-helix domain containing 6b [Source:ZFIN;Acc:ZDB-GENE-041114-95]
100. nhsa ENSDARG00000070227 686 0.934 - - - - - 0.934 - - - Nance-Horan syndrome a (congenital cataracts and dental anomalies) [Source:ZFIN;Acc:ZDB-GENE-090617-1]

There are 313 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA