Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-261n9.2

Gene Name Gene ID Reads Annotation
si:ch211-261n9.2 si:ch211-261n9.2 4










Genes with expression patterns similar to si:ch211-261n9.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-261n9.2 si:ch211-261n9.2 4 4 - - - 1.000 - 1.000 - 1.000 1.000
2. si:ch211-271e10.1 ENSDARG00000095735 15 2 - - - - - 1.000 - - 1.000 si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
3. CCDC74B CCDC74B 8 1.987 - - - - - 1.000 - - 0.987
4. C7H15orf43 C7H15orf43 10 1.754 - - - - - 0.754 - - 1.000
5. nptxrb ENSDARG00000053375, ENSDARG00000109291 27 1.678 - - - 0.937 - - - - 0.741 neuronal pentraxin receptor b [Source:ZFIN;Acc:ZDB-GENE-050208-595]
6. NAV1 NAV1 23 1.66 - - - 0.942 - - - 0.718 -
7. C1S_1 C1S_1 11 1.532 - - - 0.811 - 0.721 - - -
8. mvb12bb ENSDARG00000079478 9 1.427 - - - - - 0.709 - 0.718 - multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
9. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1 - - - - - 1.000 - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
10. zap70 ENSDARG00000015752 1 1 - - - - - 1.000 - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
11. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - - - - - 1.000 - - -
12. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - - - 1.000 - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
13. BX682234.3 BX682234.3 7 1 - - - 1.000 - - - - -
14. mms22l ENSDARG00000074691 232 1 - - - - - 1.000 - - - MMS22-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-030131-3869]
15. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - - - - - 1.000 - - -
16. EML4 7 1 - - - - - 1.000 - - - echinoderm microtubule associated protein like 4
17. MUC5AC_2 MUC5AC_2 5 1 - - - 1.000 - - - - -
18. fam136a ENSDARG00000098401 50 1 - - - - - 1.000 - - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
19. si:dkey-238o14.8 si:dkey-238o14.8 32 1 - - - - - 1.000 - - -
20. zgc:153921_1 ENSDARG00000020738, ENSDARG00000038405 19 1 - - - 1.000 - - - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
21. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
22. si:dkey-15j16.3 ENSDARG00000042683 2 1 - - - - - 1.000 - - - si:dkey-15j16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4680]
23. TMC5 ENSDARG00000013252 22 1 - - - - - 1.000 - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
24. zbtb47a ENSDARG00000057751 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 47a [Source:ZFIN;Acc:ZDB-GENE-081104-121]
25. bicd1a ENSDARG00000079496 2 1 - - - - - - - - 1.000 bicaudal D homolog 1a [Source:ZFIN;Acc:ZDB-GENE-081031-9]
26. BX324215.3 BX324215.3 12 1 - - - - - 1.000 - - -
27. FASN ENSDARG00000087657 18 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
28. rhof ENSDARG00000054389, ENSDARG00000111798 15 1 - - - - - 1.000 - - - ras homolog family member F [Source:ZFIN;Acc:ZDB-GENE-050522-280]
29. si:ch211-162i8.6 si:ch211-162i8.6 15 1 - - - - - - - - 1.000
30. mstna ENSDARG00000042947 1 1 - - - - - 1.000 - - - myostatin a [Source:ZFIN;Acc:ZDB-GENE-050208-735]
31. polr3b ENSDARG00000062915, ENSDARG00000113895 144 1 - - - - - 1.000 - - - polymerase (RNA) III (DNA directed) polypeptide B [Source:ZFIN;Acc:ZDB-GENE-030131-2887]
32. zgc:113389 zgc:113389 123 1 - - - - - 1.000 - - -
33. cdc14aa ENSDARG00000013858 18 1 - - - - - 1.000 - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
34. si:dkey-43k4.4 si:dkey-43k4.4 4 1 - - - - - 1.000 - - -
35. si:dkeyp-68b7.5 ENSDARG00000079930 14 1 - - - - - 1.000 - - - si:dkeyp-68b7.5 [Source:ZFIN;Acc:ZDB-GENE-070912-670]
36. lama3 ENSDARG00000071462 1 1 - - - - - 1.000 - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
37. hmgcra ENSDARG00000052734, ENSDARG00000109336 45 1 - - - - - 1.000 - - - 3-hydroxy-3-methylglutaryl-CoA reductase a [Source:ZFIN;Acc:ZDB-GENE-040401-2]
38. KCNA2 KCNA2 66 1 - - - - - 1.000 - - -
39. rhoh ENSDARG00000070121 1 1 - - - - - 1.000 - - - ras homolog family member H [Source:ZFIN;Acc:ZDB-GENE-060228-7]
40. or111-3 ENSDARG00000086633 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
41. gtf3c2 ENSDARG00000004574 153 1 - - - - - 1.000 - - - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
42. BX936386.1 ENSDARG00000097166 5 1 - - - - - 1.000 - - -
43. fermt3b ENSDARG00000030938 17 1 - - - - - 1.000 - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
44. CU638695.1 CU638695.1 90 1 - - - - - 1.000 - - -
45. FAM150B FAM150B 29 1 - - - - - 1.000 - - -
46. DYDC2 ENSDARG00000101848 2 1 - - - - - 1.000 - - - DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
47. si:dkey-40j3.1 si:dkey-40j3.1 1 1 - - - - - 1.000 - - -
48. rs1 rs1 70 1 - - - - - 1.000 - - -
49. ros1 ENSDARG00000087197 9 1 - - - - - - - - 1.000 c-ros oncogene 1 , receptor tyrosine kinase [Source:ZFIN;Acc:ZDB-GENE-020506-1]
50. SOWAHD ENSDARG00000087152, ENSDARG00000109642 24 1 - - - - - 1.000 - - - sosondowah ankyrin repeat domain family d [Source:ZFIN;Acc:ZDB-GENE-120215-42]
51. BX248122.1 ENSDARG00000112449 1 1 - - - - - 1.000 - - - gastrula zinc finger protein XlCGF57.1-like [Source:NCBI gene;Acc:103910472]
52. TGFBR3L TGFBR3L 16 1 - - - - - 1.000 - - -
53. TRIM14_3 TRIM14_3 7 1 - - - - - 1.000 - - -
54. RNF222 24 1 - - - - - 1.000 - - - ring finger protein 222
55. ttr ENSDARG00000037191 11 1 - - - - - 1.000 - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
56. akap1a ENSDARG00000089802 5 1 - - - - - 1.000 - - - A kinase (PRKA) anchor protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-5980]
57. bckdhb ENSDARG00000014676 17 1 - - - - - 1.000 - - - branched chain keto acid dehydrogenase E1, beta polypeptide [Source:ZFIN;Acc:ZDB-GENE-030124-2]
58. itga11b ENSDARG00000007950 17 1 - - - - - 1.000 - - - integrin, alpha 11b [Source:ZFIN;Acc:ZDB-GENE-071009-4]
59. chrna9 ENSDARG00000054680 4 1 - - - - - 1.000 - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
60. CU469509.2 CU469509.2 4 1 - - - - - - - - 1.000
61. DXO ENSDARG00000036852 16 1 - - - - - 1.000 - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
62. ENTPD5 ENTPD5 42 1 - - - - - 1.000 - - -
63. si:dkey-260c8.5 si:dkey-260c8.5 8 1 - - - 1.000 - - - - -
64. CST7 CST7 22 1 - - - - - 1.000 - - -
65. si:dkey-46g23.2 ENSDARG00000115817 11 1 - - - - - 1.000 - - - si:dkey-46g23.2 [Source:ZFIN;Acc:ZDB-GENE-070705-476]
66. CU468012.1 ENSDARG00000077794 3 1 - - - - - 1.000 - - -
67. BX511021.2 ENSDARG00000097646 5 1 - - - - - 1.000 - - -
68. dis3 ENSDARG00000060559, ENSDARG00000110345 92 1 - - - - - 1.000 - - - DIS3 exosome endoribonuclease and 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-080213-3]
69. CT573253.1 CT573253.1 4 1 - - - - - - - - 1.000
70. CR388046.1_1 ENSDARG00000102930 1 1 - - - - - 1.000 - - -
71. grtp1b ENSDARG00000030269 24 1 - - - - - 1.000 - - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
72. 5S_rRNA_31 5S_rRNA_31 3 1 - - - - - - - - 1.000
73. BX649314.1 BX649314.1 3 1 - - - - - 1.000 - - -
74. rpap3 ENSDARG00000087962 22 1 - - - - - 1.000 - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
75. MSH4 ENSDARG00000075826 37 1 - - - - - 1.000 - - - mutS homolog 4 [Source:ZFIN;Acc:ZDB-GENE-131121-643]
76. DPYSL2 DPYSL2 4 1 - - - - - 1.000 - - -
77. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 1 - - - - - 1.000 - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]
78. insl5b ENSDARG00000069294 1 1 - - - - - 1.000 - - - insulin-like 5b [Source:ZFIN;Acc:ZDB-GENE-070122-5]
79. mybpc2a ENSDARG00000030157 11 1 - - - - - 1.000 - - - myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
80. cd8a ENSDARG00000044797 7 1 - - - - - 1.000 - - - CD8a molecule [Source:ZFIN;Acc:ZDB-GENE-060210-2]
81. Telomerase-vert Telomerase-vert 8 1 - - - - - - - - 1.000
82. si:dkey-115f9.3 7 1 - - - 1.000 - - - - - si:dkey-115f9.3, transcript variant X2
83. adgra1a ENSDARG00000054177 19 1 - - - - - 1.000 - - - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
84. CR388129.2 CR388129.2 1 1 - - - 1.000 - - - - -
85. si:ch211-106h4.5 ENSDARG00000095059 1 1 - - - - - 1.000 - - - si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15]
86. zgc:174945 ENSDARG00000062057, ENSDARG00000112119 3 1 - - - - - 1.000 - - - zgc:174945 [Source:ZFIN;Acc:ZDB-GENE-080204-80]
87. rxfp3.2a 11 1 - - - - - - - - 1.000 relaxin/insulin-like family peptide receptor 3.2a
88. tlx1 ENSDARG00000003965 67 1 - - - - - 1.000 - - - T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
89. kitb ENSDARG00000056133, ENSDARG00000113747 10 1 - - - - - 1.000 - - - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
90. MFRP MFRP 6 1 - - - - - 1.000 - - -
91. si:dkey-33i11.1 ENSDARG00000053027 2 1 - - - - - 1.000 - - - si:dkey-33i11.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4630]
92. uvssa ENSDARG00000100916 73 1 - - - - - 1.000 - - - UV-stimulated scaffold protein A [Source:ZFIN;Acc:ZDB-GENE-091204-111]
93. wu:fe38f03 wu:fe38f03 22 1 - - - - - 1.000 - - -
94. PEG3_29 PEG3_29 28 1 - - - - - 1.000 - - -
95. macrod1 ENSDARG00000029609 66 1 - - - - - 1.000 - - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
96. si:dkey-57k2.6 ENSDARG00000095608 14 1 - - - - - 1.000 - - - si:dkey-57k2.6 [Source:ZFIN;Acc:ZDB-GENE-070912-558]
97. COL21A1 ENSDARG00000025320 6 1 - - - - - - - - 1.000 collagen, type XXI, alpha 1 [Source:ZFIN;Acc:ZDB-GENE-110607-3]
98. cryba2a ENSDARG00000030349 1342 1 - - - - - 1.000 - - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
99. setd1bb ENSDARG00000077244 34 1 - - - - - 1.000 - - - SET domain containing 1B, b [Source:ZFIN;Acc:ZDB-GENE-080522-1]
100. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - 1.000 - - - - - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]

There are 303 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA