Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-261n9.2

Gene Name Gene ID Reads Annotation
si:ch211-261n9.2 si:ch211-261n9.2 4










Genes with expression patterns similar to si:ch211-261n9.2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-261n9.2 si:ch211-261n9.2 4 4 - - - 1.000 - 1.000 - 1.000 1.000
2. si:ch211-271e10.1 ENSDARG00000095735 15 2 - - - - - 1.000 - - 1.000 si:ch211-271e10.1 [Source:ZFIN;Acc:ZDB-GENE-060526-145]
3. CCDC74B CCDC74B 8 1.987 - - - - - 1.000 - - 0.987
4. C7H15orf43 C7H15orf43 10 1.754 - - - - - 0.754 - - 1.000
5. nptxrb ENSDARG00000053375, ENSDARG00000109291 27 1.678 - - - 0.937 - - - - 0.741 neuronal pentraxin receptor b [Source:ZFIN;Acc:ZDB-GENE-050208-595]
6. NAV1 NAV1 23 1.66 - - - 0.942 - - - 0.718 -
7. C1S_1 C1S_1 11 1.532 - - - 0.811 - 0.721 - - -
8. mvb12bb ENSDARG00000079478 9 1.427 - - - - - 0.709 - 0.718 - multivesicular body subunit 12Bb [Source:ZFIN;Acc:ZDB-GENE-080414-2]
9. TRIM14_3 TRIM14_3 7 1 - - - - - 1.000 - - -
10. si:ch211-214p13.7 1 1 - - - - - 1.000 - - - si:ch211-214p13.7
11. si:ch211-260m19.8 si:ch211-260m19.8 33 1 - - - - - - - - 1.000
12. racgap1 ENSDARG00000015460 38 1 - - - - - 1.000 - - - Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]
13. rs1 rs1 70 1 - - - - - 1.000 - - -
14. uvssa ENSDARG00000100916 73 1 - - - - - 1.000 - - - UV-stimulated scaffold protein A [Source:ZFIN;Acc:ZDB-GENE-091204-111]
15. zgc:113389 zgc:113389 123 1 - - - - - 1.000 - - -
16. grtp1b ENSDARG00000030269 24 1 - - - - - 1.000 - - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
17. BX936386.1 ENSDARG00000097166 5 1 - - - - - 1.000 - - -
18. chrna9 ENSDARG00000054680 4 1 - - - - - 1.000 - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
19. acanb ENSDARG00000045799, ENSDARG00000113408 2 1 - - - - - 1.000 - - - aggrecan b [Source:ZFIN;Acc:ZDB-GENE-100422-16]
20. mybpc2a ENSDARG00000030157 11 1 - - - - - 1.000 - - - myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
21. calml4a ENSDARG00000075800 14 1 - - - - - 1.000 - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
22. BX248122.1 ENSDARG00000112449 1 1 - - - - - 1.000 - - - gastrula zinc finger protein XlCGF57.1-like [Source:NCBI gene;Acc:103910472]
23. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
24. zgc:153921_1 ENSDARG00000020738, ENSDARG00000038405 19 1 - - - 1.000 - - - - - zgc:153921 [Source:ZFIN;Acc:ZDB-GENE-060929-816]
25. HEATR2 HEATR2 6 1 - - - - - 1.000 - - -
26. cdc14aa ENSDARG00000013858 18 1 - - - - - 1.000 - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
27. macrod1 ENSDARG00000029609 66 1 - - - - - 1.000 - - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
28. ftr66 ENSDARG00000005327 1 1 - - - - - 1.000 - - - finTRIM family, member 66 [Source:ZFIN;Acc:ZDB-GENE-070912-661]
29. BX511021.2 ENSDARG00000097646 5 1 - - - - - 1.000 - - -
30. BX682234.3 BX682234.3 7 1 - - - 1.000 - - - - -
31. MUC5AC_2 MUC5AC_2 5 1 - - - 1.000 - - - - -
32. KCNA2 KCNA2 66 1 - - - - - 1.000 - - -
33. CU638695.1 CU638695.1 90 1 - - - - - 1.000 - - -
34. mms22l ENSDARG00000074691 232 1 - - - - - 1.000 - - - MMS22-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-030131-3869]
35. PEG3_29 PEG3_29 28 1 - - - - - 1.000 - - -
36. zap70 ENSDARG00000015752 1 1 - - - - - 1.000 - - - zeta chain of T cell receptor associated protein kinase 70 [Source:ZFIN;Acc:ZDB-GENE-050522-257]
37. ttr ENSDARG00000037191 11 1 - - - - - 1.000 - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
38. lama3 ENSDARG00000071462 1 1 - - - - - 1.000 - - - laminin, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-050208-475]
39. or103-4 ENSDARG00000003090 1 1 - - - - - 1.000 - - - odorant receptor, family C, subfamily 103, member 4 [Source:ZFIN;Acc:ZDB-GENE-000329-12]
40. DPYSL2 DPYSL2 4 1 - - - - - 1.000 - - -
41. si:dkey-238o14.8 si:dkey-238o14.8 32 1 - - - - - 1.000 - - -
42. C20H2orf71 C20H2orf71 2 1 - - - - - 1.000 - - -
43. tlx1 ENSDARG00000003965 67 1 - - - - - 1.000 - - - T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
44. LARS2 ENSDARG00000075337 181 1 - - - - - 1.000 - - - leucyl-tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-070928-3]
45. si:dkey-163m14.6 5 1 - - - 1.000 - - - - - si:dkey-163m14.6
46. si:dkey-54j5.1 si:dkey-54j5.1 4 1 - - - 1.000 - - - - -
47. CR388046.1_1 ENSDARG00000102930 1 1 - - - - - 1.000 - - -
48. PGBD4_5 PGBD4_5 16 1 - - - - - - - - 1.000
49. zbtb47a ENSDARG00000057751 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 47a [Source:ZFIN;Acc:ZDB-GENE-081104-121]
50. cryba2a ENSDARG00000030349 1342 1 - - - - - 1.000 - - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
51. snx33 ENSDARG00000014954 45 1 - - - - - 1.000 - - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
52. SNORD65_1 SNORD65_1 25 1 - - - - - 1.000 - - -
53. SNORD65 SNORD65 35 1 - - - - - 1.000 - - -
54. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - - - 1.000 - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
55. 5S_rRNA_31 5S_rRNA_31 3 1 - - - - - - - - 1.000
56. pnp6 ENSDARG00000040942, ENSDARG00000114753 10 1 - - - - - 1.000 - - - purine nucleoside phosphorylase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1800]
57. tshb tshb 7 1 - - - - - 1.000 - - -
58. rhoh ENSDARG00000070121 1 1 - - - - - 1.000 - - - ras homolog family member H [Source:ZFIN;Acc:ZDB-GENE-060228-7]
59. si:dkey-47k20.1 ENSDARG00000092523 2 1 - - - - - - - - 1.000 si:dkey-47k20.1 [Source:ZFIN;Acc:ZDB-GENE-060503-641]
60. setd1bb ENSDARG00000077244 34 1 - - - - - 1.000 - - - SET domain containing 1B, b [Source:ZFIN;Acc:ZDB-GENE-080522-1]
61. si:dkey-239i20.2 ENSDARG00000043518, ENSDARG00000111965 23 1 - - - - - - - 1.000 - si:dkey-239i20.2 [Source:ZFIN;Acc:ZDB-GENE-041001-98]
62. EML4 7 1 - - - - - 1.000 - - - echinoderm microtubule associated protein like 4
63. si:ch211-93g23.2 ENSDARG00000070558 105 1 - - - - - - - - 1.000 si:ch211-93g23.2 [Source:ZFIN;Acc:ZDB-GENE-090312-164]
64. si:ch73-340m8.2 ENSDARG00000040258 2 1 - - - 1.000 - - - - - si:ch73-340m8.2 [Source:ZFIN;Acc:ZDB-GENE-110411-209]
65. TRIM14_14 TRIM14_14 2 1 - - - - - - - - 1.000
66. CU468012.1 ENSDARG00000077794 3 1 - - - - - 1.000 - - -
67. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - - - - - 1.000 - - -
68. Telomerase-vert Telomerase-vert 8 1 - - - - - - - - 1.000
69. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1 - - - - - 1.000 - - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
70. cd8a ENSDARG00000044797 7 1 - - - - - 1.000 - - - CD8a molecule [Source:ZFIN;Acc:ZDB-GENE-060210-2]
71. DXO ENSDARG00000036852 16 1 - - - - - 1.000 - - - decapping exoribonuclease [Source:HGNC Symbol;Acc:HGNC:2992]
72. traf1 ENSDARG00000069482 50 1 - - - - - 1.000 - - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
73. XCR1 XCR1 9 1 - - - - - 1.000 - - -
74. si:dkeyp-66d7.5 si:dkeyp-66d7.5 1 1 - - - - - 1.000 - - -
75. ENTPD5 ENTPD5 42 1 - - - - - 1.000 - - -
76. CU855880.2 CU855880.2 3 1 - - - - - 1.000 - - -
77. sh3bp1 ENSDARG00000078119 5 1 - - - - - 1.000 - - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
78. TGFBR3L TGFBR3L 16 1 - - - - - 1.000 - - -
79. fam136a ENSDARG00000098401 50 1 - - - - - 1.000 - - - family with sequence similarity 136, member A [Source:ZFIN;Acc:ZDB-GENE-040426-2729]
80. si:dkey-126g1.6 si:dkey-126g1.6 1 1 - - - - - 1.000 - - -
81. grk7a ENSDARG00000020602 10 1 - - - - - 1.000 - - - G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
82. RNF222 24 1 - - - - - 1.000 - - - ring finger protein 222
83. mthfsd ENSDARG00000062042 34 1 - - - - - 1.000 - - - methenyltetrahydrofolate synthetase domain containing [Source:ZFIN;Acc:ZDB-GENE-030131-3513]
84. si:ch211-67f13.7 ENSDARG00000077845 8 1 - - - - - 1.000 - - - si:ch211-67f13.7 [Source:ZFIN;Acc:ZDB-GENE-090313-126]
85. bicd1a ENSDARG00000079496 2 1 - - - - - - - - 1.000 bicaudal D homolog 1a [Source:ZFIN;Acc:ZDB-GENE-081031-9]
86. dnajc5b ENSDARG00000058147 6 1 - - - - - 1.000 - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
87. insl5b ENSDARG00000069294 1 1 - - - - - 1.000 - - - insulin-like 5b [Source:ZFIN;Acc:ZDB-GENE-070122-5]
88. si:dkey-260c8.5 si:dkey-260c8.5 8 1 - - - 1.000 - - - - -
89. rpap3 ENSDARG00000087962 22 1 - - - - - 1.000 - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
90. ADAD2 ENSDARG00000105626 6 1 - - - 1.000 - - - - - adenosine deaminase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-130530-788]
91. si:dkeyp-80c12.4 ENSDARG00000036479 7 1 - - - - - 1.000 - - - si:dkeyp-80c12.4 [Source:ZFIN;Acc:ZDB-GENE-090313-403]
92. zgc:174945 ENSDARG00000062057, ENSDARG00000112119 3 1 - - - - - 1.000 - - - zgc:174945 [Source:ZFIN;Acc:ZDB-GENE-080204-80]
93. CABZ01117575.1 CABZ01117575.1 1 1 - - - - - 1.000 - - -
94. si:ch211-162i8.6 si:ch211-162i8.6 15 1 - - - - - - - - 1.000
95. FASN ENSDARG00000087657 18 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
96. TMC5 ENSDARG00000013252 22 1 - - - - - 1.000 - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
97. wu:fe38f03 wu:fe38f03 22 1 - - - - - 1.000 - - -
98. si:ch211-204a13.1 si:ch211-204a13.1 6 1 - - - - - 1.000 - - -
99. si:ch211-106h4.5 ENSDARG00000095059 1 1 - - - - - 1.000 - - - si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15]
100. rassf2b ENSDARG00000044044, ENSDARG00000110241 26 1 - - - - - 1.000 - - - Ras association (RalGDS/AF-6) domain family member 2b [Source:ZFIN;Acc:ZDB-GENE-041221-6]

There are 303 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA