Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for si:ch211-260o22.1

Gene Name Gene ID Reads Annotation
si:ch211-260o22.1 si:ch211-260o22.1 34










Genes with expression patterns similar to si:ch211-260o22.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-260o22.1 si:ch211-260o22.1 34 5 - - 1.000 1.000 1.000 - - 1.000 1.000
2. vmhc 234 3.527 - - 0.716 0.943 0.873 - - 0.995 - ventricular myosin heavy chain
3. myl7 ENSDARG00000019096 1023 3.319 - - - 0.838 0.796 - - 0.949 0.736 myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
4. nppa ENSDARG00000052960 295 2.778 - - - 0.981 0.929 - - 0.868 - natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
5. vmhcl 119 2.614 - - 0.767 0.930 0.917 - - - - ventricular myosin heavy chain-like
6. csrp3 ENSDARG00000101706 21 2.602 - - - 0.899 - - - 0.931 0.772 cysteine and glycine-rich protein 3 (cardiac LIM protein) [Source:ZFIN;Acc:ZDB-GENE-041010-119]
7. cmlc1 ENSDARG00000032976 455 2.549 - - - 0.857 - - - 0.976 0.716 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
8. tnnt2a ENSDARG00000020610 313 2.522 - - - 0.867 0.717 - - 0.938 - troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
9. tnni1b ENSDARG00000052708 478 2.493 - - - 0.792 0.840 - - 0.861 - troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
10. lmod2b ENSDARG00000045864 63 2.395 - - - 0.894 - - - 0.746 0.755 leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
11. hspb12 139 2.343 - - 0.729 0.863 - - - - 0.751 heat shock protein, alpha-crystallin-related, b12
12. ETV3L ETV3L 67 1.867 - - 0.965 - 0.902 - - - -
13. guk1b ENSDARG00000005776 23 1.861 - - 0.965 - 0.896 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
14. UNC119 UNC119 104 1.861 - - 0.965 - 0.896 - - - -
15. zgc:109965 ENSDARG00000012126 11 1.861 - - 0.965 - 0.896 - - - - zgc:109965 [Source:ZFIN;Acc:ZDB-GENE-050913-21]
16. guca1g ENSDARG00000045737, ENSDARG00000114717 22 1.861 - - 0.965 - 0.896 - - - - guanylate cyclase activator 1g [Source:ZFIN;Acc:ZDB-GENE-050120-1]
17. RCVRN_1 RCVRN_1 46 1.852 - - 0.965 - 0.887 - - - -
18. gnat1 ENSDARG00000044199 251 1.847 - - 0.965 - 0.882 - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-011128-11]
19. stxbp1b ENSDARG00000056036, ENSDARG00000112938 84 1.839 - - 0.973 - 0.866 - - - - syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]
20. nr2e3 ENSDARG00000045904, ENSDARG00000113178 208 1.827 - - 0.965 - 0.862 - - - - nuclear receptor subfamily 2, group E, member 3 [Source:ZFIN;Acc:ZDB-GENE-041114-63]
21. gngt1 ENSDARG00000035798, ENSDARG00000116914 255 1.821 - - 0.965 - 0.856 - - - - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7596]
22. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1.751 - - - - 0.832 - - 0.919 - NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
23. tnnc1a ENSDARG00000011400 165 1.737 - - - 0.806 - - - 0.931 - troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
24. STRC ENSDARG00000105391 10 1.697 - - - - - - - 0.973 0.724 stereocilin [Source:ZFIN;Acc:ZDB-GENE-160114-58]
25. edn3b ENSDARG00000086669 8 1.695 - - 0.799 - 0.896 - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
26. foxe1 ENSDARG00000079266 6 1.679 - - - - 0.806 - - 0.873 - forkhead box E1 [Source:ZFIN;Acc:ZDB-GENE-061116-1]
27. BX571969.1 BX571969.1 8 1.675 - - 0.827 - - - - 0.848 -
28. dbh ENSDARG00000069446, ENSDARG00000114942 60 1.648 - - - - 0.769 - - 0.879 - dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
29. ryr2b ENSDARG00000003706 6 1.627 - - - 0.779 - - - 0.848 - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
30. rpe65a ENSDARG00000007480 52 1.618 - - 0.758 - 0.860 - - - - retinal pigment epithelium-specific protein 65a [Source:ZFIN;Acc:ZDB-GENE-040426-1717]
31. adprhl1 ENSDARG00000041589 34 1.595 - - - - 0.735 - - 0.860 - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
32. CLIC6 ENSDARG00000099108 10 1.558 - - 0.762 - 0.796 - - - - chloride intracellular channel 6 [Source:ZFIN;Acc:ZDB-GENE-121214-172]
33. fhl2a ENSDARG00000042018 244 1.469 - - - 0.740 0.729 - - - - four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
34. DMBX1 DMBX1 140 1.466 - - 0.733 - 0.733 - - - -
35. six6a ENSDARG00000025187 40 0.988 - - - 0.988 - - - - - SIX homeobox 6a [Source:ZFIN;Acc:ZDB-GENE-040426-1282]
36. CABZ01064671.1 ENSDARG00000039935 21 0.988 - - - - - - - 0.988 -
37. grin2da ENSDARG00000086207 28 0.983 - - - - 0.983 - - - - glutamate receptor, ionotropic, N-methyl D-aspartate 2D, a [Source:ZFIN;Acc:ZDB-GENE-041008-124]
38. C17orf105 C17orf105 1 0.973 - - - - - - - 0.973 -
39. si:ch211-202m22.1 ENSDARG00000094491 24 0.973 - - - - - - - 0.973 - si:ch211-202m22.1 [Source:ZFIN;Acc:ZDB-GENE-060531-31]
40. si:ch211-89f22.1 si:ch211-89f22.1 11 0.965 - - 0.965 - - - - - -
41. klf9 ENSDARG00000068194 5 0.965 - - 0.965 - - - - - - Kruppel-like factor 9 [Source:ZFIN;Acc:ZDB-GENE-060526-244]
42. MOB2 MOB2 4 0.965 - - 0.965 - - - - - -
43. SYNPR ENSDARG00000037587 20 0.965 - - 0.965 - - - - - - synaptoporin [Source:HGNC Symbol;Acc:HGNC:16507]
44. WASF1 ENSDARG00000060349 1 0.965 - - 0.965 - - - - - - WAS protein family, member 1 [Source:ZFIN;Acc:ZDB-GENE-070705-555]
45. si:ch211-191n13.1 si:ch211-191n13.1 1 0.965 - - 0.965 - - - - - -
46. SPTBN4 ENSDARG00000092624 6 0.965 - - 0.965 - - - - - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
47. tk1 ENSDARG00000102245 1 0.965 - - 0.965 - - - - - - thymidine kinase 1, soluble [Source:ZFIN;Acc:ZDB-GENE-030131-5801]
48. si:ch211-207o17.8 si:ch211-207o17.8 1 0.965 - - 0.965 - - - - - -
49. badb ENSDARG00000054937, ENSDARG00000114609 11 0.965 - - 0.965 - - - - - - BCL2 associated agonist of cell death b [Source:ZFIN;Acc:ZDB-GENE-000616-1]
50. si:dkey-254e13.12 si:dkey-254e13.12 1 0.965 - - 0.965 - - - - - -
51. adam10b ENSDARG00000015502 26 0.965 - - 0.965 - - - - - - ADAM metallopeptidase domain 10b [Source:ZFIN;Acc:ZDB-GENE-071115-1]
52. si:ch211-284e13.12 ENSDARG00000094492 0 0.965 - - 0.965 - - - - - - si:ch211-284e13.12 [Source:ZFIN;Acc:ZDB-GENE-060526-158]
53. si:dkey-151m22.8 ENSDARG00000095934 41 0.965 - - 0.965 - - - - - - si:dkey-151m22.8 [Source:ZFIN;Acc:ZDB-GENE-110411-250]
54. CABZ01068819.1 CABZ01068819.1 20 0.965 - - 0.965 - - - - - -
55. cart2 ENSDARG00000045832, ENSDARG00000112535 13 0.965 - - 0.965 - - - - - - cocaine- and amphetamine-regulated transcript 2 [Source:ZFIN;Acc:ZDB-GENE-050417-23]
56. KSR1_1 KSR1_1 1 0.965 - - 0.965 - - - - - -
57. WASF3 WASF3 1 0.965 - - 0.965 - - - - - -
58. COL9A3 ENSDARG00000037845 1 0.965 - - 0.965 - - - - - - collagen, type IX, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9799]
59. si:ch211-133l5.5 si:ch211-133l5.5 123 0.965 - - 0.965 - - - - - -
60. taar10b ENSDARG00000090592 0 0.965 - - 0.965 - - - - - - trace amine-associated receptor 10b [Source:ZFIN;Acc:ZDB-GENE-041014-67]
61. C20H2orf71 C20H2orf71 2 0.965 - - 0.965 - - - - - -
62. plp1b ENSDARG00000011929 8 0.965 - - 0.965 - - - - - - proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
63. si:dkey-242e21.4 1 0.965 - - 0.965 - - - - - - si:dkey-242e21.4
64. si:dkey-30k22.8 si:dkey-30k22.8 7 0.965 - - 0.965 - - - - - -
65. SNORD15_1 SNORD15_1 1 0.965 - - 0.965 - - - - - -
66. cnga3a ENSDARG00000070726 8 0.965 - - 0.965 - - - - - - cyclic nucleotide gated channel alpha 3a [Source:ZFIN;Acc:ZDB-GENE-090611-2]
67. si:dkeyp-98a7.10 si:dkeyp-98a7.10 7 0.965 - - 0.965 - - - - - -
68. zgc:113293 ENSDARG00000038271 0 0.965 - - 0.965 - - - - - - zgc:113293 [Source:ZFIN;Acc:ZDB-GENE-050417-453]
69. gnat2 ENSDARG00000042529 112 0.965 - - 0.965 - - - - - - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
70. si:ch211-1e14.1 ENSDARG00000063361, ENSDARG00000114300 0 0.965 - - 0.965 - - - - - - si:ch211-1e14.1 [Source:ZFIN;Acc:ZDB-GENE-050420-149]
71. pde8b ENSDARG00000063706 1 0.965 - - 0.965 - - - - - - phosphodiesterase 8B [Source:ZFIN;Acc:ZDB-GENE-091117-3]
72. ntm ENSDARG00000018065 1 0.965 - - 0.965 - - - - - - neurotrimin [Source:ZFIN;Acc:ZDB-GENE-060421-6020]
73. kcnj1a.6 ENSDARG00000088484 4 0.965 - - 0.965 - - - - - - potassium inwardly-rectifying channel, subfamily J, member 1a, tandem duplicate 6 [Source:ZFIN;Acc:ZDB-GENE-050420-272]
74. FRMPD1_2 FRMPD1_2 2 0.965 - - 0.965 - - - - - -
75. CABZ01087025.1 ENSDARG00000117232 10 0.965 - - 0.965 - - - - - -
76. SCARNA6 SCARNA6 258 0.965 - - 0.965 - - - - - -
77. si:ch1073-188e1.1 ENSDARG00000074085 0 0.965 - - 0.965 - - - - - - si:ch1073-188e1.1 [Source:ZFIN;Acc:ZDB-GENE-070705-5]
78. prdm11 ENSDARG00000074468 2 0.965 - - 0.965 - - - - - - PR domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-061221-1]
79. ENKD1 ENSDARG00000043550 44 0.965 - - 0.965 - - - - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
80. CABZ01055343.4 CABZ01055343.4 9 0.965 - - 0.965 - - - - - -
81. tmx3 5 0.965 - - 0.965 - - - - - - thioredoxin-related transmembrane protein 3
82. cnga3b ENSDARG00000012297 2 0.965 - - 0.965 - - - - - - cyclic nucleotide gated channel alpha 3b [Source:ZFIN;Acc:ZDB-GENE-090312-121]
83. si:dkey-11f7.5 si:dkey-11f7.5 0 0.965 - - 0.965 - - - - - -
84. AL954698.2 ENSDARG00000102132 28 0.965 - - 0.965 - - - - - -
85. naa40_1 ENSDARG00000024109, ENSDARG00000090570 1 0.965 - - 0.965 - - - - - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
86. rh50 ENSDARG00000041848 0 0.965 - - 0.965 - - - - - - Rh50-like protein [Source:ZFIN;Acc:ZDB-GENE-000427-1]
87. olfcg4 ENSDARG00000099773 1 0.965 - - 0.965 - - - - - - olfactory receptor C family, g4 [Source:ZFIN;Acc:ZDB-GENE-060503-66]
88. Metazoa_SRP_25 Metazoa_SRP_25 13 0.965 - - 0.965 - - - - - -
89. si:dkey-26c10.5 ENSDARG00000088023 9 0.965 - - 0.965 - - - - - - si:dkey-26c10.5 [Source:ZFIN;Acc:ZDB-GENE-060607-13]
90. CR759816.1 ENSDARG00000098977 27 0.965 - - 0.965 - - - - - -
91. SH2D2A SH2D2A 31 0.965 - - 0.965 - - - - - -
92. CR450780.4 CR450780.4 0 0.965 - - 0.965 - - - - - -
93. ptchd1 ENSDARG00000018066 3 0.965 - - 0.965 - - - - - - patched domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-061220-1]
94. SLC1A7 SLC1A7 3 0.965 - - 0.965 - - - - - -
95. crybb2 ENSDARG00000053512 15 0.965 - - 0.965 - - - - - - crystallin, beta B2 [Source:ZFIN;Acc:ZDB-GENE-060130-1]
96. si:ch211-223g7.2 ENSDARG00000103265 1 0.965 - - 0.965 - - - - - - si:ch211-223g7.2 [Source:ZFIN;Acc:ZDB-GENE-050420-153]
97. C12H17orf62 C12H17orf62 4 0.965 - - 0.965 - - - - - -
98. SIPA1L2 ENSDARG00000061640 2 0.965 - - 0.965 - - - - - - signal-induced proliferation-associated 1 like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-66]
99. BX510935.2 BX510935.2 1 0.965 - - 0.965 - - - - - -
100. snoU13 snoU13 2 0.965 - - 0.965 - - - - - -

There are 438 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA