Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for si:ch211-260c23.1

Gene Name Gene ID Reads Annotation
si:ch211-260c23.1 13 si:ch211-260c23.1, transcript variant X7










Genes with expression patterns similar to si:ch211-260c23.1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. si:ch211-260c23.1 13 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 si:ch211-260c23.1, transcript variant X7
2. rpz3 ENSDARG00000069728 11 2.683 - 0.715 - - - 1.000 - - 0.968 rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
3. mos ENSDARG00000069744, ENSDARG00000110060, ENSDARG00000110181 11 2.619 - 0.862 - - - 1.000 - 0.757 - v-mos Moloney murine sarcoma viral oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-040428-3]
4. asb10 ENSDARG00000099461 27 2.423 - - - - 0.964 0.749 - 0.710 - ankyrin repeat and SOCS box containing 10 [Source:ZFIN;Acc:ZDB-GENE-060929-1106]
5. PUSL1 ENSDARG00000074565 54 2.355 0.702 - - 0.732 - - - 0.921 - pseudouridylate synthase like 1 [Source:ZFIN;Acc:ZDB-GENE-101110-1]
6. opn4a ENSDARG00000022098, ENSDARG00000110010 3 2 - - 1.000 - - 1.000 - - - opsin 4a (melanopsin) [Source:ZFIN;Acc:ZDB-GENE-070111-2]
7. th2 ENSDARG00000038384 1 2 - - 1.000 - - 1.000 - - - tyrosine hydroxylase 2 [Source:ZFIN;Acc:ZDB-GENE-050201-1]
8. pik3ap1 ENSDARG00000078285 23 1.936 - - - - - 1.000 - 0.936 - phosphoinositide-3-kinase adaptor protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-250]
9. TMEM136 TMEM136 13 1.868 - - - - - 1.000 0.868 - -
10. olfcg9 ENSDARG00000105189 1 1.868 - - - - - 1.000 0.868 - - olfactory receptor C family, g9 [Source:ZFIN;Acc:ZDB-GENE-081029-6]
11. olfcd1 ENSDARG00000008095 2 1.868 - - - - - - 0.868 1.000 - olfactory receptor C family, d1 [Source:ZFIN;Acc:ZDB-GENE-100721-9]
12. si:ch211-108c6.2 14 1.868 - - - - - 1.000 0.868 - - si:ch211-108c6.2
13. IAPP 2 1.868 - - - - - - 0.868 1.000 - islet amyloid polypeptide
14. CABZ01079442.1 CABZ01079442.1 1 1.868 - - 1.000 - - - 0.868 - -
15. cacna2d2 cacna2d2 16 1.862 - 0.862 - - - - - - 1.000
16. si:dkeyp-35e5.11 si:dkeyp-35e5.11 38 1.862 - 0.862 - - - 1.000 - - -
17. arhgap23b ENSDARG00000026840 6 1.862 - 0.862 - - - 1.000 - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
18. hid1b ENSDARG00000100583 35 1.862 - 0.862 - - - 1.000 - - - HID1 domain containing b [Source:ZFIN;Acc:ZDB-GENE-040718-239]
19. klhl24 klhl24 40 1.836 - 0.836 - - - 1.000 - - -
20. BX927122.3 BX927122.3 19 1.832 - - - - - 1.000 - - 0.832
21. cacng7b ENSDARG00000070624 18 1.824 - - - - - 1.000 - 0.824 - calcium channel, voltage-dependent, gamma subunit 7b [Source:ZFIN;Acc:ZDB-GENE-100921-51]
22. chia.3 ENSDARG00000009612 14 1.807 - - - - - - 0.868 0.939 - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
23. b3gat1 b3gat1 77 1.799 - 0.862 - - - 0.937 - - -
24. si:dkey-1d7.3 ENSDARG00000075837 18 1.739 - - - - - 0.878 - 0.861 - si:dkey-1d7.3 [Source:ZFIN;Acc:ZDB-GENE-091118-46]
25. cbln2b ENSDARG00000077151 38 1.735 - 0.862 - - - 0.873 - - - cerebellin 2b precursor [Source:ZFIN;Acc:ZDB-GENE-070615-12]
26. ARHGEF38 ENSDARG00000079377 9 1.73 - 0.862 - - - - 0.868 - - Rho guanine nucleotide exchange factor (GEF) 38 [Source:ZFIN;Acc:ZDB-GENE-090313-83]
27. si:dkey-103k4.5 si:dkey-103k4.5 11 1.73 - 0.862 - - - - 0.868 - -
28. TRMT12 ENSDARG00000060338 58 1.725 0.725 - - - - - 1.000 - - tRNA methyltransferase 12 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060825-182]
29. CABZ01112732.1 ENSDARG00000068453 4 1.725 0.725 - - - - 1.000 - - - tripartite motif-containing protein 14-like [Source:NCBI gene;Acc:100329480]
30. ahr1b ENSDARG00000023537 44 1.725 - 0.725 - - - 1.000 - - - aryl hydrocarbon receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050922-1]
31. SLC4A8 ENSDARG00000015531 16 1.725 0.725 - 1.000 - - - - - - solute carrier family 4, sodium bicarbonate cotransporter, member 8 [Source:ZFIN;Acc:ZDB-GENE-131119-88]
32. si:dkey-63d15.12 ENSDARG00000075480 9 1.725 0.725 - - - - 1.000 - - - si:dkey-63d15.12 [Source:ZFIN;Acc:ZDB-GENE-080303-18]
33. ENKD1 ENSDARG00000043550 44 1.725 0.725 - - - - 1.000 - - - enkurin domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25246]
34. ptcd2 ENSDARG00000035391, ENSDARG00000115227 15 1.717 - - - - 0.717 1.000 - - - pentatricopeptide repeat domain 2 [Source:ZFIN;Acc:ZDB-GENE-050417-82]
35. C3H19orf66 C3H19orf66 20 1.715 - 0.715 - - - 1.000 - - -
36. colm colm 36 1.689 - 0.821 - - - - 0.868 - -
37. epdr1 ENSDARG00000045420 132 1.672 - 0.795 - - - 0.877 - - - ependymin related 1 [Source:ZFIN;Acc:ZDB-GENE-040718-113]
38. stxbp6l ENSDARG00000028354, ENSDARG00000112083, ENSDARG00000113476 43 1.662 - - - - - 0.794 0.868 - - syntaxin binding protein 6 (amisyn), like [Source:ZFIN;Acc:ZDB-GENE-040724-16]
39. cdkl5 ENSDARG00000015240 68 1.642 - 0.883 - - - - - 0.759 - cyclin-dependent kinase-like 5 [Source:ZFIN;Acc:ZDB-GENE-081022-110]
40. LAMTOR1 ENSDARG00000076464 27 1.637 - 0.856 - - - - - 0.781 - late endosomal/lysosomal adaptor, MAPK and MTOR activator 1 [Source:ZFIN;Acc:ZDB-GENE-130819-1]
41. spred3 ENSDARG00000040358 134 1.631 - - - - - 0.921 0.710 - - sprouty-related, EVH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-061207-31]
42. CABZ01112647.1 CABZ01112647.1 147 1.629 - - - - - 0.722 - - 0.907
43. edil3 edil3 24 1.627 - - - - - 0.764 0.863 - -
44. panx1b ENSDARG00000014910, ENSDARG00000112399 136 1.622 - - - - - 0.754 0.868 - - pannexin 1b [Source:ZFIN;Acc:ZDB-GENE-070705-192]
45. si:dkey-256h2.1 ENSDARG00000021849 38 1.611 - 0.862 - - - - - - 0.749 si:dkey-256h2.1 [Source:ZFIN;Acc:ZDB-GENE-030131-9466]
46. si:ch211-253p18.2 ENSDARG00000092770 21 1.604 - 0.862 - - - - - 0.742 - si:ch211-253p18.2 [Source:ZFIN;Acc:ZDB-GENE-041001-106]
47. SLC13A5 SLC13A5 31 1.599 - 0.862 - - - - - - 0.737
48. CHST15 ENSDARG00000074527 210 1.593 0.725 - - - - - 0.868 - - carbohydrate (N-acetylgalactosamine 4-sulfate 6-O) sulfotransferase 15 [Source:ZFIN;Acc:ZDB-GENE-131127-327]
49. THSD7B THSD7B 15 1.589 0.725 - - - - 0.864 - - -
50. cyp46a2 cyp46a2 38 1.587 0.725 0.862 - - - - - - -
51. slc16a12a ENSDARG00000017773 47 1.579 - 0.816 - - - - - - 0.763 solute carrier family 16, member 12a [Source:ZFIN;Acc:ZDB-GENE-080721-24]
52. si:ch211-136m16.8 ENSDARG00000090767 91 1.577 - 0.862 - - - - 0.715 - - si:ch211-136m16.8 [Source:ZFIN;Acc:ZDB-GENE-121214-301]
53. CABZ01044356.1 CABZ01044356.1 36 1.551 - - - - - 0.749 0.802 - -
54. brinp3b ENSDARG00000075352 14 1.547 - - - - - 0.771 - - 0.776 bone morphogenetic protein/retinoic acid inducible neural-specific 3b [Source:ZFIN;Acc:ZDB-GENE-121022-1]
55. pou4f2 ENSDARG00000069737 451 1.535 - 0.730 - - - - 0.805 - - POU class 4 homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-040401-1]
56. asb18 ENSDARG00000012948, ENSDARG00000114572 22 1.529 - - - - - - 0.700 0.829 - ankyrin repeat and SOCS box containing 18 [Source:ZFIN;Acc:ZDB-GENE-090313-391]
57. si:ch73-119o17.1 si:ch73-119o17.1 6 1.517 0.725 - - - - - - 0.792 -
58. dscamb ENSDARG00000028118 82 1.497 - 0.730 - - - 0.767 - - - Down syndrome cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-031118-67]
59. si:ch211-10j20.4 si:ch211-10j20.4 0 1 - - - - - 1.000 - - -
60. si:ch211-209f23.3 ENSDARG00000095607 15 1 1.000 - - - - - - - - si:ch211-209f23.3 [Source:ZFIN;Acc:ZDB-GENE-100921-45]
61. si:ch73-346o4.3 si:ch73-346o4.3 29 1 - - - - - 1.000 - - -
62. si:ch211-59m15.2 si:ch211-59m15.2 3 1 - - - - - 1.000 - - -
63. rnf165a ENSDARG00000077906 133 1 - - - - - 1.000 - - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
64. ZP2_2 ZP2_2 28 1 - - - - - 1.000 - - -
65. si:ch211-258f1.3 ENSDARG00000105119 23 1 - - - - - 1.000 - - - si:ch211-258f1.3 [Source:ZFIN;Acc:ZDB-GENE-070912-252]
66. CIT_1 CIT_1 6 1 - - - - - 1.000 - - -
67. nitr3a_1 ENSDARG00000110676 44 1 - - - - - 1.000 - - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
68. nab2 ENSDARG00000078076 108 1 - - - - - 1.000 - - - NGFI-A binding protein 2 (EGR1 binding protein 2) [Source:ZFIN;Acc:ZDB-GENE-080204-105]
69. si:ch211-268b13.6 si:ch211-268b13.6 0 1 - - - - - 1.000 - - -
70. zgc:113030 ENSDARG00000069869 53 1 - - - - - 1.000 - - - zgc:113030 [Source:ZFIN;Acc:ZDB-GENE-050522-528]
71. CABZ01023423.1 CABZ01023423.1 8 1 - - - - - 1.000 - - -
72. zgc:136678 zgc:136678 2 1 - - - - - 1.000 - - -
73. tceanc2 ENSDARG00000062919 32 1 - - - - - 1.000 - - - transcription elongation factor A (SII) N-terminal and central domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070705-486]
74. lhfpl5a ENSDARG00000045023 2 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 5a [Source:ZFIN;Acc:ZDB-GENE-110131-8]
75. CU468142.1 CU468142.1 6 1 - - - - - 1.000 - - -
76. si:ch211-160j14.4 si:ch211-160j14.4 0 1 - - 1.000 - - - - - -
77. si:dkey-208k4.10 si:dkey-208k4.10 1 1 - - - - - 1.000 - - -
78. wnt2 ENSDARG00000041117, ENSDARG00000115436 242 1 - 1.000 - - - - - - - wingless-type MMTV integration site family member 2 [Source:ZFIN;Acc:ZDB-GENE-980526-416]
79. si:ch211-196c10.5 si:ch211-196c10.5 3 1 - - - - - 1.000 - - -
80. sall1b ENSDARG00000075891 32 1 - 1.000 - - - - - - - spalt-like transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-020228-3]
81. si:dkey-222f2.7 ENSDARG00000071667 1 1 - - - - - 1.000 - - - si:dkey-222f2.7 [Source:ZFIN;Acc:ZDB-GENE-050208-727]
82. zgc:92161 ENSDARG00000101749 27 1 - - - - - 1.000 - - - zgc:92161 [Source:ZFIN;Acc:ZDB-GENE-040912-22]
83. kctd4 ENSDARG00000068691, ENSDARG00000116087 85 1 - - - - - 1.000 - - - potassium channel tetramerization domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040704-71]
84. si:ch211-113a14.24 ENSDARG00000051718 183 1 - - - - - 1.000 - - - si:ch211-113a14.24 [Source:ZFIN;Acc:ZDB-GENE-121214-122]
85. CABZ01053617.1 CABZ01053617.1 5 1 - - - - - 1.000 - - -
86. si:dkey-93m18.5 si:dkey-93m18.5 2 1 - - 1.000 - - - - - -
87. CR925880.1 CR925880.1 196 1 - - - - - - 1.000 - -
88. CR339051.1 CR339051.1 9 1 - - - - - 1.000 - - -
89. pcdh15b ENSDARG00000008127 2 1 - - - - - 1.000 - - - protocadherin-related 15b [Source:ZFIN;Acc:ZDB-GENE-050214-1]
90. FAM175B FAM175B 23 1 - 1.000 - - - - - - -
91. si:dkey-78o7.3 ENSDARG00000100387 59 1 - - - - - 1.000 - - - si:dkey-78o7.3 [Source:ZFIN;Acc:ZDB-GENE-120709-79]
92. si:dkey-47k20.7 ENSDARG00000056014 1 1 - - - - - 1.000 - - - si:dkey-47k20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-264]
93. olfm3b ENSDARG00000039174 3 1 - - 1.000 - - - - - - olfactomedin 3b [Source:ZFIN;Acc:ZDB-GENE-070912-606]
94. zgc:171759_2 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 48 1 - - - - - 1.000 - - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
95. si:dkey-111e8.2 si:dkey-111e8.2 0 1 - - - - - 1.000 - - -
96. polg ENSDARG00000060951 33 1 - - - - - 1.000 - - - polymerase (DNA directed), gamma [Source:ZFIN;Acc:ZDB-GENE-060303-1]
97. efr3a ENSDARG00000005163, ENSDARG00000115083 7 1 - - - - - 1.000 - - - EFR3 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1681]
98. mctp1b ENSDARG00000060871 20 1 - - - - - 1.000 - - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
99. cdc42ep2 ENSDARG00000053959 32 1 - - - - - 1.000 - - - CDC42 effector protein (Rho GTPase binding) 2 [Source:ZFIN;Acc:ZDB-GENE-050320-104]
100. DIP2B DIP2B 18 1 - - - - - 1.000 - - -

There are 1155 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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